Experiment: m.b. Furfuryl Alcohol 0.032 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PGA1_c14900 and PGA1_c14910 are separated by 201 nucleotides PGA1_c14910 and PGA1_c14920 are separated by 34 nucleotides
PGA1_c14900: PGA1_c14900 - delta-aminolevulinic acid dehydratase HemB, at 1,546,948 to 1,547,946
_c14900
PGA1_c14910: PGA1_c14910 - hypothetical protein, at 1,548,148 to 1,548,672
_c14910
PGA1_c14920: PGA1_c14920 - transcription-repair-coupling factor Mfd, at 1,548,707 to 1,552,174
_c14920
Position (kb)
1548
1549 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1548.086 kb on + strand at 1548.106 kb on + strand at 1548.106 kb on + strand at 1548.106 kb on + strand at 1548.106 kb on + strand at 1548.106 kb on + strand at 1548.106 kb on + strand at 1548.106 kb on + strand at 1548.106 kb on + strand at 1548.114 kb on - strand at 1548.114 kb on - strand at 1548.131 kb on - strand at 1548.138 kb on + strand at 1548.156 kb on + strand at 1548.156 kb on - strand at 1548.181 kb on + strand at 1548.229 kb on + strand, within PGA1_c14910 at 1548.236 kb on - strand, within PGA1_c14910 at 1548.369 kb on + strand, within PGA1_c14910 at 1548.369 kb on + strand, within PGA1_c14910 at 1548.401 kb on + strand, within PGA1_c14910 at 1548.409 kb on - strand, within PGA1_c14910 at 1548.911 kb on + strand at 1549.016 kb on - strand at 1549.210 kb on + strand, within PGA1_c14920 at 1549.213 kb on - strand, within PGA1_c14920 at 1549.252 kb on - strand, within PGA1_c14920 at 1549.313 kb on - strand, within PGA1_c14920 at 1549.511 kb on - strand, within PGA1_c14920 at 1549.521 kb on - strand, within PGA1_c14920 at 1549.537 kb on + strand, within PGA1_c14920
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Furfuryl Alcohol 0.032 vol% remove 1,548,086 + -0.9 1,548,106 + +0.3 1,548,106 + -0.1 1,548,106 + -1.2 1,548,106 + +0.7 1,548,106 + +0.1 1,548,106 + -0.1 1,548,106 + -0.7 1,548,106 + -0.4 1,548,114 - +0.3 1,548,114 - +0.5 1,548,131 - -0.1 1,548,138 + +0.2 1,548,156 + +0.4 1,548,156 - +0.8 1,548,181 + +0.2 1,548,229 + PGA1_c14910 0.15 -0.7 1,548,236 - PGA1_c14910 0.17 +0.1 1,548,369 + PGA1_c14910 0.42 -0.2 1,548,369 + PGA1_c14910 0.42 -0.5 1,548,401 + PGA1_c14910 0.48 -1.7 1,548,409 - PGA1_c14910 0.50 -1.8 1,548,911 + -3.3 1,549,016 - -2.7 1,549,210 + PGA1_c14920 0.15 +0.1 1,549,213 - PGA1_c14920 0.15 -0.6 1,549,252 - PGA1_c14920 0.16 -0.5 1,549,313 - PGA1_c14920 0.17 -2.1 1,549,511 - PGA1_c14920 0.23 +0.2 1,549,521 - PGA1_c14920 0.23 -1.4 1,549,537 + PGA1_c14920 0.24 +1.6
Or see this region's nucleotide sequence