Experiment: m.b. Doxycycline hyclate 0.032 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_1322 and HP15_1323 are separated by 55 nucleotides HP15_1323 and HP15_1324 are separated by 21 nucleotides
HP15_1322: HP15_1322 - conserved hypothetical protein, at 1,386,252 to 1,387,145
_1322
HP15_1323: HP15_1323 - hypothetical protein, at 1,387,201 to 1,387,356
_1323
HP15_1324: HP15_1324 - metallo-beta-lactamase family protein, at 1,387,378 to 1,388,553
_1324
Position (kb)
1387
1388 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1386.201 kb on + strand at 1386.203 kb on + strand at 1386.267 kb on - strand at 1386.372 kb on + strand, within HP15_1322 at 1386.372 kb on + strand, within HP15_1322 at 1386.434 kb on + strand, within HP15_1322 at 1386.457 kb on - strand, within HP15_1322 at 1386.477 kb on - strand, within HP15_1322 at 1386.500 kb on + strand, within HP15_1322 at 1386.532 kb on - strand, within HP15_1322 at 1386.562 kb on - strand, within HP15_1322 at 1386.574 kb on + strand, within HP15_1322 at 1386.663 kb on - strand, within HP15_1322 at 1386.740 kb on + strand, within HP15_1322 at 1386.761 kb on - strand, within HP15_1322 at 1386.780 kb on - strand, within HP15_1322 at 1386.802 kb on + strand, within HP15_1322 at 1386.810 kb on - strand, within HP15_1322 at 1386.946 kb on + strand, within HP15_1322 at 1387.221 kb on - strand, within HP15_1323 at 1387.258 kb on - strand, within HP15_1323 at 1387.265 kb on + strand, within HP15_1323 at 1387.539 kb on + strand, within HP15_1324 at 1387.550 kb on + strand, within HP15_1324 at 1387.552 kb on - strand, within HP15_1324 at 1387.615 kb on - strand, within HP15_1324 at 1387.756 kb on - strand, within HP15_1324 at 1387.917 kb on - strand, within HP15_1324 at 1387.958 kb on + strand, within HP15_1324 at 1387.995 kb on - strand, within HP15_1324 at 1388.077 kb on - strand, within HP15_1324 at 1388.077 kb on - strand, within HP15_1324 at 1388.079 kb on + strand, within HP15_1324 at 1388.122 kb on - strand, within HP15_1324 at 1388.160 kb on + strand, within HP15_1324
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Doxycycline hyclate 0.032 mg/ml remove 1,386,201 + -0.8 1,386,203 + -1.7 1,386,267 - -0.3 1,386,372 + HP15_1322 0.13 +0.9 1,386,372 + HP15_1322 0.13 -0.8 1,386,434 + HP15_1322 0.20 +0.1 1,386,457 - HP15_1322 0.23 +0.2 1,386,477 - HP15_1322 0.25 -0.1 1,386,500 + HP15_1322 0.28 +1.2 1,386,532 - HP15_1322 0.31 +0.5 1,386,562 - HP15_1322 0.35 +0.3 1,386,574 + HP15_1322 0.36 -0.8 1,386,663 - HP15_1322 0.46 +1.5 1,386,740 + HP15_1322 0.55 +2.7 1,386,761 - HP15_1322 0.57 -1.7 1,386,780 - HP15_1322 0.59 -1.2 1,386,802 + HP15_1322 0.62 +1.2 1,386,810 - HP15_1322 0.62 -0.7 1,386,946 + HP15_1322 0.78 +0.1 1,387,221 - HP15_1323 0.13 +0.1 1,387,258 - HP15_1323 0.37 -1.9 1,387,265 + HP15_1323 0.41 -0.8 1,387,539 + HP15_1324 0.14 -0.4 1,387,550 + HP15_1324 0.15 +1.3 1,387,552 - HP15_1324 0.15 -1.5 1,387,615 - HP15_1324 0.20 +0.1 1,387,756 - HP15_1324 0.32 -0.1 1,387,917 - HP15_1324 0.46 +1.5 1,387,958 + HP15_1324 0.49 +0.7 1,387,995 - HP15_1324 0.52 -1.6 1,388,077 - HP15_1324 0.59 +0.7 1,388,077 - HP15_1324 0.59 -0.4 1,388,079 + HP15_1324 0.60 -0.9 1,388,122 - HP15_1324 0.63 +1.2 1,388,160 + HP15_1324 0.66 +1.0
Or see this region's nucleotide sequence