Experiment: m.b. Furfuryl Alcohol 0.032 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PGA1_c11670 and PGA1_c11680 are separated by 860 nucleotides PGA1_c11680 and PGA1_c11690 are separated by 38 nucleotides PGA1_c11690 and PGA1_c11700 are separated by 139 nucleotides
PGA1_c11670: PGA1_c11670 - Uncharacterized conserved protein, at 1,208,446 to 1,209,633
_c11670
PGA1_c11680: PGA1_c11680 - acetyltransferase domain-containing protein, at 1,210,494 to 1,211,033
_c11680
PGA1_c11690: PGA1_c11690 - thioesterase domain-containing protein, at 1,211,072 to 1,211,599
_c11690
PGA1_c11700: PGA1_c11700 - 5,10-methylenetetrahydrofolate reductase MetF, at 1,211,739 to 1,212,608
_c11700
Position (kb)
1210
1211
1212 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1209.527 kb on + strand at 1209.560 kb on + strand at 1209.560 kb on + strand at 1209.560 kb on + strand at 1209.568 kb on - strand at 1209.568 kb on - strand at 1209.641 kb on + strand at 1209.650 kb on - strand at 1209.673 kb on - strand at 1209.707 kb on + strand at 1209.707 kb on + strand at 1209.707 kb on + strand at 1209.708 kb on + strand at 1209.712 kb on + strand at 1209.717 kb on + strand at 1209.717 kb on + strand at 1209.717 kb on + strand at 1209.725 kb on - strand at 1209.751 kb on + strand at 1209.759 kb on - strand at 1209.810 kb on + strand at 1209.890 kb on - strand at 1209.890 kb on - strand at 1209.919 kb on + strand at 1209.927 kb on + strand at 1209.927 kb on + strand at 1209.932 kb on + strand at 1209.950 kb on + strand at 1209.950 kb on + strand at 1209.983 kb on + strand at 1209.995 kb on + strand at 1210.031 kb on - strand at 1210.033 kb on + strand at 1210.033 kb on + strand at 1210.079 kb on - strand at 1210.104 kb on + strand at 1210.184 kb on - strand at 1210.195 kb on + strand at 1210.198 kb on - strand at 1210.198 kb on - strand at 1210.198 kb on - strand at 1210.198 kb on - strand at 1210.213 kb on + strand at 1210.241 kb on + strand at 1210.251 kb on + strand at 1210.251 kb on + strand at 1210.251 kb on + strand at 1210.251 kb on + strand at 1210.259 kb on - strand at 1210.259 kb on - strand at 1210.259 kb on - strand at 1210.259 kb on - strand at 1210.259 kb on - strand at 1210.259 kb on - strand at 1210.269 kb on - strand at 1210.271 kb on + strand at 1210.295 kb on + strand at 1210.295 kb on + strand at 1210.303 kb on - strand at 1210.307 kb on + strand at 1210.307 kb on + strand at 1210.307 kb on + strand at 1210.307 kb on + strand at 1210.314 kb on - strand at 1210.315 kb on - strand at 1210.316 kb on - strand at 1210.321 kb on - strand at 1210.322 kb on - strand at 1210.337 kb on - strand at 1210.388 kb on + strand at 1210.396 kb on - strand at 1210.398 kb on + strand at 1210.413 kb on + strand at 1210.415 kb on - strand at 1210.421 kb on + strand at 1210.421 kb on + strand at 1210.421 kb on + strand at 1210.516 kb on + strand at 1210.573 kb on + strand, within PGA1_c11680 at 1210.573 kb on + strand, within PGA1_c11680 at 1210.573 kb on + strand, within PGA1_c11680 at 1210.573 kb on + strand, within PGA1_c11680 at 1210.581 kb on - strand, within PGA1_c11680 at 1210.586 kb on - strand, within PGA1_c11680 at 1210.613 kb on + strand, within PGA1_c11680 at 1210.615 kb on + strand, within PGA1_c11680 at 1210.623 kb on - strand, within PGA1_c11680 at 1210.634 kb on + strand, within PGA1_c11680 at 1210.642 kb on - strand, within PGA1_c11680 at 1210.649 kb on + strand, within PGA1_c11680 at 1210.649 kb on + strand, within PGA1_c11680 at 1210.649 kb on + strand, within PGA1_c11680 at 1210.649 kb on + strand, within PGA1_c11680 at 1210.649 kb on + strand, within PGA1_c11680 at 1210.649 kb on + strand, within PGA1_c11680 at 1210.649 kb on + strand, within PGA1_c11680 at 1210.649 kb on + strand, within PGA1_c11680 at 1210.649 kb on + strand, within PGA1_c11680 at 1210.649 kb on + strand, within PGA1_c11680 at 1210.649 kb on + strand, within PGA1_c11680 at 1210.649 kb on + strand, within PGA1_c11680 at 1210.649 kb on + strand, within PGA1_c11680 at 1210.649 kb on + strand, within PGA1_c11680 at 1210.649 kb on + strand, within PGA1_c11680 at 1210.649 kb on + strand, within PGA1_c11680 at 1210.649 kb on + strand, within PGA1_c11680 at 1210.649 kb on + strand, within PGA1_c11680 at 1210.649 kb on + strand, within PGA1_c11680 at 1210.649 kb on + strand, within PGA1_c11680 at 1210.649 kb on + strand, within PGA1_c11680 at 1210.649 kb on + strand, within PGA1_c11680 at 1210.649 kb on + strand, within PGA1_c11680 at 1210.649 kb on + strand, within PGA1_c11680 at 1210.657 kb on - strand, within PGA1_c11680 at 1210.657 kb on - strand, within PGA1_c11680 at 1210.657 kb on - strand, within PGA1_c11680 at 1210.657 kb on - strand, within PGA1_c11680 at 1210.657 kb on - strand, within PGA1_c11680 at 1210.657 kb on - strand, within PGA1_c11680 at 1210.657 kb on - strand, within PGA1_c11680 at 1210.657 kb on - strand, within PGA1_c11680 at 1210.657 kb on - strand, within PGA1_c11680 at 1210.657 kb on - strand, within PGA1_c11680 at 1210.657 kb on - strand, within PGA1_c11680 at 1210.755 kb on - strand, within PGA1_c11680 at 1210.887 kb on + strand, within PGA1_c11680 at 1210.887 kb on + strand, within PGA1_c11680 at 1210.900 kb on - strand, within PGA1_c11680 at 1210.951 kb on + strand, within PGA1_c11680 at 1210.968 kb on - strand, within PGA1_c11680 at 1210.996 kb on - strand at 1211.027 kb on + strand at 1211.032 kb on + strand at 1211.065 kb on + strand at 1211.073 kb on - strand at 1211.073 kb on - strand at 1211.073 kb on - strand at 1211.089 kb on + strand at 1211.229 kb on - strand, within PGA1_c11690 at 1211.261 kb on + strand, within PGA1_c11690 at 1211.269 kb on - strand, within PGA1_c11690 at 1211.333 kb on - strand, within PGA1_c11690 at 1211.339 kb on + strand, within PGA1_c11690 at 1211.347 kb on - strand, within PGA1_c11690 at 1211.366 kb on - strand, within PGA1_c11690 at 1211.407 kb on + strand, within PGA1_c11690 at 1211.407 kb on + strand, within PGA1_c11690 at 1211.415 kb on + strand, within PGA1_c11690 at 1211.415 kb on + strand, within PGA1_c11690 at 1211.417 kb on + strand, within PGA1_c11690 at 1211.425 kb on - strand, within PGA1_c11690 at 1211.430 kb on - strand, within PGA1_c11690 at 1211.430 kb on - strand, within PGA1_c11690 at 1211.442 kb on + strand, within PGA1_c11690 at 1211.443 kb on - strand, within PGA1_c11690 at 1211.533 kb on + strand, within PGA1_c11690 at 1211.569 kb on + strand at 1211.569 kb on + strand at 1211.573 kb on - strand at 1211.577 kb on - strand at 1211.577 kb on - strand at 1211.577 kb on - strand at 1211.578 kb on - strand at 1211.589 kb on + strand at 1211.628 kb on - strand at 1211.709 kb on - strand at 1211.799 kb on + strand at 1211.804 kb on + strand at 1211.807 kb on - strand at 1211.812 kb on - strand at 1211.812 kb on - strand at 1211.812 kb on - strand at 1211.829 kb on - strand, within PGA1_c11700 at 1211.838 kb on + strand, within PGA1_c11700 at 1211.858 kb on + strand, within PGA1_c11700 at 1211.866 kb on - strand, within PGA1_c11700 at 1211.866 kb on - strand, within PGA1_c11700 at 1211.883 kb on - strand, within PGA1_c11700 at 1211.959 kb on - strand, within PGA1_c11700 at 1211.989 kb on + strand, within PGA1_c11700
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Furfuryl Alcohol 0.032 vol% remove 1,209,527 + -0.3 1,209,560 + +0.5 1,209,560 + -0.7 1,209,560 + -0.3 1,209,568 - +1.0 1,209,568 - -2.3 1,209,641 + -0.9 1,209,650 - -1.0 1,209,673 - -1.0 1,209,707 + -2.6 1,209,707 + +0.4 1,209,707 + -0.1 1,209,708 + +0.5 1,209,712 + -0.7 1,209,717 + -0.5 1,209,717 + -1.9 1,209,717 + -1.6 1,209,725 - +0.4 1,209,751 + +0.2 1,209,759 - -0.1 1,209,810 + +0.9 1,209,890 - -0.1 1,209,890 - -0.3 1,209,919 + +0.6 1,209,927 + -0.0 1,209,927 + +0.5 1,209,932 + -0.6 1,209,950 + +0.3 1,209,950 + -0.7 1,209,983 + +0.3 1,209,995 + -1.1 1,210,031 - +0.9 1,210,033 + +0.4 1,210,033 + -1.3 1,210,079 - -0.9 1,210,104 + -0.1 1,210,184 - +1.2 1,210,195 + +0.2 1,210,198 - +0.4 1,210,198 - -0.6 1,210,198 - +1.3 1,210,198 - +0.6 1,210,213 + -0.7 1,210,241 + -2.5 1,210,251 + -0.1 1,210,251 + -0.5 1,210,251 + -0.4 1,210,251 + -0.6 1,210,259 - -0.5 1,210,259 - +0.8 1,210,259 - +1.0 1,210,259 - -1.6 1,210,259 - -2.0 1,210,259 - -0.6 1,210,269 - -0.4 1,210,271 + -1.8 1,210,295 + -0.1 1,210,295 + -0.9 1,210,303 - +0.3 1,210,307 + -0.9 1,210,307 + +0.1 1,210,307 + +0.7 1,210,307 + -1.6 1,210,314 - -0.2 1,210,315 - -0.1 1,210,316 - -0.5 1,210,321 - +0.8 1,210,322 - -0.8 1,210,337 - +0.8 1,210,388 + +0.1 1,210,396 - +1.6 1,210,398 + -0.4 1,210,413 + -2.7 1,210,415 - +0.3 1,210,421 + -0.0 1,210,421 + -0.2 1,210,421 + -1.9 1,210,516 + +1.3 1,210,573 + PGA1_c11680 0.15 -0.6 1,210,573 + PGA1_c11680 0.15 -0.6 1,210,573 + PGA1_c11680 0.15 +0.0 1,210,573 + PGA1_c11680 0.15 -0.6 1,210,581 - PGA1_c11680 0.16 +1.3 1,210,586 - PGA1_c11680 0.17 +1.0 1,210,613 + PGA1_c11680 0.22 -2.5 1,210,615 + PGA1_c11680 0.22 -0.1 1,210,623 - PGA1_c11680 0.24 +0.6 1,210,634 + PGA1_c11680 0.26 +0.3 1,210,642 - PGA1_c11680 0.27 +1.0 1,210,649 + PGA1_c11680 0.29 -0.5 1,210,649 + PGA1_c11680 0.29 -1.3 1,210,649 + PGA1_c11680 0.29 +1.9 1,210,649 + PGA1_c11680 0.29 -0.9 1,210,649 + PGA1_c11680 0.29 +0.9 1,210,649 + PGA1_c11680 0.29 +0.8 1,210,649 + PGA1_c11680 0.29 -0.7 1,210,649 + PGA1_c11680 0.29 +1.0 1,210,649 + PGA1_c11680 0.29 +1.0 1,210,649 + PGA1_c11680 0.29 +0.2 1,210,649 + PGA1_c11680 0.29 -0.4 1,210,649 + PGA1_c11680 0.29 -0.0 1,210,649 + PGA1_c11680 0.29 +0.2 1,210,649 + PGA1_c11680 0.29 +0.9 1,210,649 + PGA1_c11680 0.29 +1.7 1,210,649 + PGA1_c11680 0.29 +0.6 1,210,649 + PGA1_c11680 0.29 -0.5 1,210,649 + PGA1_c11680 0.29 +0.9 1,210,649 + PGA1_c11680 0.29 +1.0 1,210,649 + PGA1_c11680 0.29 +0.7 1,210,649 + PGA1_c11680 0.29 -0.5 1,210,649 + PGA1_c11680 0.29 -2.6 1,210,649 + PGA1_c11680 0.29 -1.4 1,210,649 + PGA1_c11680 0.29 +0.2 1,210,657 - PGA1_c11680 0.30 +1.7 1,210,657 - PGA1_c11680 0.30 +1.0 1,210,657 - PGA1_c11680 0.30 +0.6 1,210,657 - PGA1_c11680 0.30 +0.4 1,210,657 - PGA1_c11680 0.30 +0.1 1,210,657 - PGA1_c11680 0.30 -0.1 1,210,657 - PGA1_c11680 0.30 +1.1 1,210,657 - PGA1_c11680 0.30 -0.9 1,210,657 - PGA1_c11680 0.30 +0.6 1,210,657 - PGA1_c11680 0.30 +1.7 1,210,657 - PGA1_c11680 0.30 +0.3 1,210,755 - PGA1_c11680 0.48 -0.1 1,210,887 + PGA1_c11680 0.73 -1.7 1,210,887 + PGA1_c11680 0.73 -0.3 1,210,900 - PGA1_c11680 0.75 +1.0 1,210,951 + PGA1_c11680 0.85 -0.5 1,210,968 - PGA1_c11680 0.88 +1.7 1,210,996 - +0.4 1,211,027 + -1.9 1,211,032 + -0.3 1,211,065 + -0.4 1,211,073 - -0.1 1,211,073 - +1.1 1,211,073 - -0.4 1,211,089 + +0.3 1,211,229 - PGA1_c11690 0.30 +0.7 1,211,261 + PGA1_c11690 0.36 -0.3 1,211,269 - PGA1_c11690 0.37 +0.3 1,211,333 - PGA1_c11690 0.49 +0.0 1,211,339 + PGA1_c11690 0.51 +0.2 1,211,347 - PGA1_c11690 0.52 -0.2 1,211,366 - PGA1_c11690 0.56 +0.1 1,211,407 + PGA1_c11690 0.63 -0.6 1,211,407 + PGA1_c11690 0.63 -0.0 1,211,415 + PGA1_c11690 0.65 -0.2 1,211,415 + PGA1_c11690 0.65 +0.2 1,211,417 + PGA1_c11690 0.65 -0.3 1,211,425 - PGA1_c11690 0.67 -1.8 1,211,430 - PGA1_c11690 0.68 -0.2 1,211,430 - PGA1_c11690 0.68 -0.3 1,211,442 + PGA1_c11690 0.70 +0.0 1,211,443 - PGA1_c11690 0.70 +1.0 1,211,533 + PGA1_c11690 0.87 -0.3 1,211,569 + -0.6 1,211,569 + +0.7 1,211,573 - -0.9 1,211,577 - -0.7 1,211,577 - -0.2 1,211,577 - +1.4 1,211,578 - -1.4 1,211,589 + -0.2 1,211,628 - -0.5 1,211,709 - -0.2 1,211,799 + -1.1 1,211,804 + +1.6 1,211,807 - -1.4 1,211,812 - +0.4 1,211,812 - -0.9 1,211,812 - -2.6 1,211,829 - PGA1_c11700 0.10 +0.3 1,211,838 + PGA1_c11700 0.11 +1.1 1,211,858 + PGA1_c11700 0.14 -0.9 1,211,866 - PGA1_c11700 0.15 -0.6 1,211,866 - PGA1_c11700 0.15 -0.2 1,211,883 - PGA1_c11700 0.17 +0.0 1,211,959 - PGA1_c11700 0.25 +0.8 1,211,989 + PGA1_c11700 0.29 +1.2
Or see this region's nucleotide sequence