Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c11255

Experiment: m.b. Furfuryl Alcohol 0.032 vol%

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntPGA1_c11250 and PGA1_c11255 are separated by 60 nucleotidesPGA1_c11255 and PGA1_c11260 are separated by 219 nucleotidesPGA1_c11260 and PGA1_c11270 are separated by 87 nucleotides PGA1_c11250: PGA1_c11250 - fatty acid/phospholipid synthesis protein PlsX, at 1,163,471 to 1,164,574 _c11250 PGA1_c11255: PGA1_c11255 - 50S ribosomal protein L32, at 1,164,635 to 1,164,841 _c11255 PGA1_c11260: PGA1_c11260 - Predicted metal-binding, possibly nucleic acid-binding protein, at 1,165,061 to 1,165,606 _c11260 PGA1_c11270: PGA1_c11270 - Small protein A (tmRNA-binding), at 1,165,694 to 1,166,161 _c11270 Position (kb) 1164 1165Strain fitness (log2 ratio) -3 -2 -1 0 1at 1164.590 kb on - strandat 1165.695 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Furfuryl Alcohol 0.032 vol%
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1,164,590 - +0.8
1,165,695 - -2.9

Or see this region's nucleotide sequence