Strain Fitness in Shewanella amazonensis SB2B around Sama_3257

Experiment: L-Histidine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Histidine (N)
3,850,736	-		Sama_3256	0.16	-0.2
3,850,762	+		Sama_3256	0.18	-0.8
3,850,762	+		Sama_3256	0.18	-0.3
3,850,762	+		Sama_3256	0.18	+0.6
3,850,763	-		Sama_3256	0.18	+0.1
3,850,763	-		Sama_3256	0.18	-0.4
3,850,841	+		Sama_3256	0.25	+0.5
3,850,841	+		Sama_3256	0.25	-1.0
3,850,966	+		Sama_3256	0.35	-0.6
3,850,967	-		Sama_3256	0.35	+1.8
3,850,967	-		Sama_3256	0.35	-1.5
3,850,989	+		Sama_3256	0.37	-0.5
3,851,129	+		Sama_3256	0.49	-1.5
3,851,129	+		Sama_3256	0.49	+0.7
3,851,129	+		Sama_3256	0.49	+0.6
3,851,129	+		Sama_3256	0.49	+0.0
3,851,130	-		Sama_3256	0.49	-1.4
3,851,136	+		Sama_3256	0.49	+0.7
3,851,142	+		Sama_3256	0.50	+4.6
3,851,159	-		Sama_3256	0.51	-2.1
3,851,185	-		Sama_3256	0.53	-0.8
3,851,211	+		Sama_3256	0.56	-1.3
3,851,211	+		Sama_3256	0.56	-1.4
3,851,212	-		Sama_3256	0.56	-1.8
3,851,212	-		Sama_3256	0.56	-1.6
3,851,221	+		Sama_3256	0.56	-0.6
3,851,221	+		Sama_3256	0.56	-0.1
3,851,221	+		Sama_3256	0.56	-2.3
3,851,221	+		Sama_3256	0.56	+1.7
3,851,221	+		Sama_3256	0.56	-0.8
3,851,222	-		Sama_3256	0.57	-1.2
3,851,222	-		Sama_3256	0.57	-0.1
3,851,222	-		Sama_3256	0.57	-2.7
3,851,222	-		Sama_3256	0.57	-0.5
3,851,222	-		Sama_3256	0.57	-3.1
3,851,222	-		Sama_3256	0.57	-3.1
3,851,222	-		Sama_3256	0.57	-2.2
3,851,304	+		Sama_3256	0.63	-1.1
3,851,304	+		Sama_3256	0.63	-1.0
3,851,304	+		Sama_3256	0.63	-0.4
3,851,304	+		Sama_3256	0.63	-1.4
3,851,305	-		Sama_3256	0.63	+0.6
3,851,305	-		Sama_3256	0.63	-0.8
3,851,305	-		Sama_3256	0.63	+2.7
3,851,321	+		Sama_3256	0.65	-0.8
3,851,321	+		Sama_3256	0.65	-1.7
3,851,321	+		Sama_3256	0.65	-0.6
3,851,374	+		Sama_3256	0.69	+0.5
3,851,374	+		Sama_3256	0.69	-0.1
3,851,374	+		Sama_3256	0.69	+0.7
3,851,374	+		Sama_3256	0.69	+4.4
3,851,374	+		Sama_3256	0.69	-0.9
3,851,375	-		Sama_3256	0.69	-0.7
3,851,425	+		Sama_3256	0.74	+1.1
3,851,426	-		Sama_3256	0.74	-1.0
3,851,427	+		Sama_3256	0.74	+1.0
3,851,427	+		Sama_3256	0.74	+0.5
3,851,428	-		Sama_3256	0.74	-0.1
3,851,428	-		Sama_3256	0.74	-2.7
3,851,428	-		Sama_3256	0.74	-1.2
3,851,463	-		Sama_3256	0.77	-0.6
3,851,488	+		Sama_3256	0.79	-1.5
3,851,488	+		Sama_3256	0.79	-0.9
3,851,522	+		Sama_3256	0.82	-2.3
3,851,522	+		Sama_3256	0.82	-1.3
3,851,522	+		Sama_3256	0.82	-2.1
3,851,523	-		Sama_3256	0.82	-0.7
3,851,556	+		Sama_3256	0.85	-2.0
3,851,577	+		Sama_3256	0.86	-0.9
3,851,595	+		Sama_3256	0.88	-1.6
3,851,595	+		Sama_3256	0.88	-2.4
3,851,596	-		Sama_3256	0.88	+0.1
3,851,596	-		Sama_3256	0.88	-0.5
3,851,740	+				-0.6
3,851,741	-				-1.4
3,851,754	+				+0.0
3,851,754	+				+2.9
3,851,754	+				-3.3
3,851,755	-				+0.9
3,851,755	-				-2.3
3,851,755	-				-1.6
3,851,766	-				-1.8
3,851,766	-				-0.7
3,851,793	+				-3.0
3,851,793	+				-0.7
3,851,820	+				-1.4
3,851,820	+				-3.5
3,851,820	+				-0.9
3,851,820	+				-1.8
3,851,820	+				+0.7
3,851,821	-				-2.6
3,851,821	-				-0.9
3,851,821	-				-1.9
3,851,821	-				-1.3
3,851,821	-				-2.3
3,852,053	+		Sama_3257	0.27	-0.3
3,852,053	+		Sama_3257	0.27	-3.0
3,852,136	-		Sama_3257	0.34	-1.3
3,852,153	+		Sama_3257	0.36	+0.2
3,852,153	+		Sama_3257	0.36	-0.1
3,852,154	-		Sama_3257	0.36	-0.8
3,852,154	-		Sama_3257	0.36	-0.5
3,852,154	-		Sama_3257	0.36	-2.9
3,852,170	-		Sama_3257	0.37	+0.9
3,852,196	+		Sama_3257	0.39	-1.8
3,852,197	-		Sama_3257	0.40	-0.6
3,852,200	+		Sama_3257	0.40	+0.5
3,852,200	+		Sama_3257	0.40	-2.3
3,852,201	-		Sama_3257	0.40	-0.6
3,852,201	-		Sama_3257	0.40	+0.8
3,852,201	-		Sama_3257	0.40	-1.9
3,852,216	+		Sama_3257	0.41	-2.2
3,852,225	-		Sama_3257	0.42	-1.5
3,852,321	+		Sama_3257	0.50	+0.1
3,852,321	+		Sama_3257	0.50	-0.3
3,852,322	-		Sama_3257	0.50	-2.5
3,852,361	+		Sama_3257	0.54	-0.8
3,852,361	+		Sama_3257	0.54	-1.3
3,852,362	-		Sama_3257	0.54	+1.2
3,852,362	-		Sama_3257	0.54	+3.6
3,852,389	+		Sama_3257	0.56	+2.1
3,852,389	+		Sama_3257	0.56	-1.5
3,852,390	-		Sama_3257	0.56	+0.3
3,852,412	+		Sama_3257	0.58	-1.3
3,852,412	+		Sama_3257	0.58	+0.1
3,852,412	+		Sama_3257	0.58	-1.2
3,852,412	+		Sama_3257	0.58	-0.7
3,852,413	-		Sama_3257	0.58	-0.9
3,852,413	-		Sama_3257	0.58	-3.0
3,852,413	-		Sama_3257	0.58	-0.9
3,852,425	-		Sama_3257	0.59	-1.3
3,852,535	-		Sama_3257	0.68	-1.5
3,852,560	+		Sama_3257	0.71	+1.7
3,852,560	+		Sama_3257	0.71	-1.8
3,852,560	+		Sama_3257	0.71	-1.2
3,852,561	-		Sama_3257	0.71	+1.0
3,852,561	-		Sama_3257	0.71	+1.2
3,852,590	+		Sama_3257	0.73	-2.5
3,852,590	+		Sama_3257	0.73	+1.7
3,852,590	+		Sama_3257	0.73	-0.8
3,852,590	+		Sama_3257	0.73	-0.9
3,852,591	-		Sama_3257	0.73	-0.3
3,852,647	-		Sama_3257	0.78	-1.8
3,852,647	-		Sama_3257	0.78	-2.1
3,852,717	+		Sama_3257	0.84	-2.0
3,852,717	+		Sama_3257	0.84	+0.4
3,852,717	+		Sama_3257	0.84	-2.3
3,852,718	-		Sama_3257	0.84	-0.5
3,852,761	+		Sama_3257	0.88	+0.5
3,852,761	+		Sama_3257	0.88	-1.3
3,852,762	-		Sama_3257	0.88	-1.0
3,852,771	+		Sama_3257	0.89	+1.7
3,852,772	-		Sama_3257	0.89	-3.3
3,852,772	-		Sama_3257	0.89	-0.1
3,852,785	+		Sama_3257	0.90	-2.7
3,852,786	-				+0.3
3,852,872	-				+0.3
3,852,879	+				+2.3
3,852,913	+				-1.5
3,852,914	-				-2.6
3,852,914	-				-0.0
3,852,924	+				-3.1
3,852,925	-				-0.1
3,852,932	+				+0.9
3,852,932	+				-1.5
3,852,983	-				-4.3
3,852,983	-				-1.8
3,852,994	+				+0.8
3,852,994	+				+2.5
3,852,994	+				-0.6
3,852,995	-				+0.3
3,852,995	-				+3.4
3,852,995	-				-0.6
3,852,995	-				-1.2
3,852,995	-				-1.6
3,852,996	+				-1.9
3,852,996	+				-1.9
3,852,996	+				+0.5
3,852,996	+				-1.1
3,852,996	+				-2.2
3,852,996	+				+0.3
3,852,996	+				-1.3
3,852,996	+				-1.9
3,852,996	+				-2.5
3,852,996	+				-1.1
3,852,996	+				-1.2
3,852,996	+				+0.2
3,852,996	+				+0.1
3,852,996	+				-0.8
3,852,997	-				-1.2
3,852,997	-				-0.0
3,852,997	-				+1.2
3,852,997	-				+0.8
3,852,997	-				-3.3
3,852,997	-				+2.9
3,852,997	-				-2.2
3,852,997	-				+0.4
3,852,997	-				+0.2
3,852,997	-				+0.2
3,852,997	-				+0.3
3,852,997	-				-0.9
3,852,997	-				+1.0
3,852,997	-				+1.9
3,852,997	-				+0.9
3,852,997	-				+0.3
3,852,997	-				+3.2
3,852,998	+				+2.4
3,852,998	+				-0.2
3,852,998	+				+0.4
3,852,998	+				-1.5
3,852,998	+				+0.5
3,852,998	+				+0.7
3,852,998	+				-1.3
3,852,998	+				-0.5
3,852,998	+				+0.7
3,852,998	+				-1.8
3,852,998	+				-2.1
3,852,998	+				+0.7
3,852,998	+				-0.7
3,852,998	+				-1.5
3,852,999	-				-0.7
3,852,999	-				-1.7
3,852,999	-				-2.8
3,852,999	-				+3.1
3,852,999	-				-1.0
3,852,999	-				-0.3
3,852,999	-				+5.7
3,852,999	-				-0.3
3,852,999	-				+1.6
3,852,999	-				-1.2
3,852,999	-				+0.1
3,852,999	-				-3.1
3,852,999	-				-0.7
3,852,999	-				+0.1
3,852,999	-				+1.3
3,853,000	+				-2.5
3,853,000	+				-1.8
3,853,000	+				+1.1
3,853,001	-				-2.2
3,853,001	-				-0.8
3,853,001	-				+0.5
3,853,001	-				-0.7
3,853,018	+				+0.7
3,853,019	-				-0.8
3,853,047	-				-0.0
3,853,052	-				-2.7
3,853,065	-				+3.2
3,853,089	+				+0.5
3,853,092	+				+2.0
3,853,092	+				+1.1
3,853,092	+				-0.4
3,853,128	-				-1.9
3,853,138	+				+0.3
3,853,139	-				+1.3
3,853,152	+				+0.7
3,853,152	+				-0.2
3,853,152	+				-1.3
3,853,153	-				-0.6
3,853,153	-				-1.9
3,853,197	+				+1.8
3,853,197	+				+2.1
3,853,198	-				-0.4
3,853,199	+				+1.9
3,853,199	+				+0.3
3,853,228	+				+2.0
3,853,228	+				+2.0
3,853,228	+				-0.1
3,853,228	+				-2.3
3,853,228	+				-0.6
3,853,228	+				-1.5
3,853,229	-				+0.2
3,853,229	-				-0.9
3,853,229	-				+0.7
3,853,229	-				+0.7
3,853,231	-				+2.9
3,853,275	+				-1.4
3,853,275	+				-1.2
3,853,275	+				-0.5
3,853,275	+				-0.3
3,853,276	-				+1.2
3,853,276	-				-0.3
3,853,276	-				+1.2
3,853,276	-				-0.1
3,853,350	+				+1.1
3,853,351	-				-0.3
3,853,488	-				-1.3
3,853,488	-				-0.7
3,853,560	+				+2.1
3,853,561	-				-0.5
3,853,593	+				+2.9
3,853,593	+				-2.4
3,853,594	-				-0.2
3,853,594	-				+0.9
3,853,594	-				+0.5
3,853,628	-				+0.9
3,853,667	+				+1.0
3,853,667	+				-1.9
3,853,668	-				+1.6
3,853,713	+				-1.8
3,853,713	+				-1.0
3,853,714	-				+1.1
3,853,714	-				+0.3
3,853,716	+				-1.0
3,853,716	+				-2.1
3,853,717	-				-1.9
3,853,717	-				-0.2
3,853,717	-				+0.5
3,853,717	-				+0.5
3,853,717	-				-1.5
3,853,717	-				-0.7
3,853,767	+				+0.3
3,853,767	+				+2.1
3,853,797	+				-2.9
3,853,797	+				-0.8
3,853,797	+				-0.7
3,853,798	-				+0.9
3,853,798	-				-0.4
3,853,798	-				+3.3
3,853,798	-				+0.5
3,853,798	-				-1.2
3,853,798	-				+0.6
3,853,798	-				+1.2
3,853,800	+				+2.1
3,853,800	+				+3.0
3,853,800	+				-1.2
3,853,800	+				-1.7
3,853,800	+				+1.7
3,853,800	+				-0.8
3,853,801	-				-3.1
3,853,801	-				+1.5
3,853,801	-				-1.8
3,853,801	-				-0.8
3,853,801	-				+1.9
3,853,801	-				-0.7
3,853,801	-				-0.5
3,853,801	-				-2.4
3,853,805	+				+0.3
3,853,805	+				+1.9
3,853,805	+				-1.5
3,853,805	+				-0.5
3,853,806	-				-0.5
3,853,806	-				-0.7
3,853,806	-				+2.4
3,853,818	+				+0.6
3,853,819	-				+1.2
3,853,819	-				+2.9
3,853,867	+				+0.6
3,853,867	+				-1.7
3,853,867	+				-0.6
3,853,867	+				+0.8
3,853,867	+				+1.8
3,853,868	-				-0.8
3,853,868	-				+2.5
3,853,868	-				+1.0
3,853,868	-				-0.3
3,853,892	+				+1.9