Strain Fitness in Shewanella amazonensis SB2B around Sama_3243

Experiment: L-Histidine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Histidine (N)
3,837,701	+		Sama_3242	0.59	+0.7
3,837,701	+		Sama_3242	0.59	-3.1
3,837,702	-		Sama_3242	0.59	-1.0
3,837,706	+		Sama_3242	0.59	-0.9
3,837,706	+		Sama_3242	0.59	-0.4
3,837,706	+		Sama_3242	0.59	-0.7
3,837,706	+		Sama_3242	0.59	+1.5
3,837,706	+		Sama_3242	0.59	-0.8
3,837,706	+		Sama_3242	0.59	+2.2
3,837,706	+		Sama_3242	0.59	+0.2
3,837,707	-		Sama_3242	0.59	-2.8
3,837,707	-		Sama_3242	0.59	-2.4
3,837,707	-		Sama_3242	0.59	+1.3
3,837,707	-		Sama_3242	0.59	-0.6
3,837,707	-		Sama_3242	0.59	+0.5
3,837,707	-		Sama_3242	0.59	-0.4
3,837,707	-		Sama_3242	0.59	-0.6
3,837,707	-		Sama_3242	0.59	+0.8
3,837,707	-		Sama_3242	0.59	+1.9
3,837,809	+		Sama_3242	0.63	+0.7
3,837,810	-		Sama_3242	0.63	-2.1
3,837,818	+		Sama_3242	0.64	-1.7
3,837,819	-		Sama_3242	0.64	-1.0
3,837,900	-		Sama_3242	0.67	+0.7
3,837,931	+		Sama_3242	0.69	-1.9
3,838,028	+		Sama_3242	0.73	+0.3
3,838,029	-		Sama_3242	0.73	-1.5
3,838,029	-		Sama_3242	0.73	-1.0
3,838,029	-		Sama_3242	0.73	-2.6
3,838,061	+		Sama_3242	0.74	-1.3
3,838,077	+		Sama_3242	0.75	+0.3
3,838,077	+		Sama_3242	0.75	+1.1
3,838,077	+		Sama_3242	0.75	-1.2
3,838,077	+		Sama_3242	0.75	-0.3
3,838,088	+		Sama_3242	0.75	-3.2
3,838,088	+		Sama_3242	0.75	-1.0
3,838,109	+		Sama_3242	0.76	-1.3
3,838,122	-		Sama_3242	0.77	-1.3
3,838,139	+		Sama_3242	0.77	-2.9
3,838,139	+		Sama_3242	0.77	-2.0
3,838,140	-		Sama_3242	0.77	-2.4
3,838,140	-		Sama_3242	0.77	+2.5
3,838,140	-		Sama_3242	0.77	+0.5
3,838,140	-		Sama_3242	0.77	+1.9
3,838,140	-		Sama_3242	0.77	+0.3
3,838,141	+		Sama_3242	0.77	-0.5
3,838,141	+		Sama_3242	0.77	+0.4
3,838,141	+		Sama_3242	0.77	-0.5
3,838,142	-		Sama_3242	0.77	+2.7
3,838,142	-		Sama_3242	0.77	+0.1
3,838,142	-		Sama_3242	0.77	+1.4
3,838,142	-		Sama_3242	0.77	-2.3
3,838,142	-		Sama_3242	0.77	-1.7
3,838,142	-		Sama_3242	0.77	+0.9
3,838,155	-		Sama_3242	0.78	-0.5
3,838,282	+		Sama_3242	0.83	-0.4
3,838,303	+		Sama_3242	0.84	-1.0
3,838,303	+		Sama_3242	0.84	+2.6
3,838,303	+		Sama_3242	0.84	-2.4
3,838,303	+		Sama_3242	0.84	+0.1
3,838,304	-		Sama_3242	0.84	+2.7
3,838,304	-		Sama_3242	0.84	-3.1
3,838,354	+		Sama_3242	0.86	+0.9
3,838,354	+		Sama_3242	0.86	+1.4
3,838,354	+		Sama_3242	0.86	+0.1
3,838,354	+		Sama_3242	0.86	-0.2
3,838,354	+		Sama_3242	0.86	+0.8
3,838,354	+		Sama_3242	0.86	+1.8
3,838,355	-		Sama_3242	0.87	-0.5
3,838,355	-		Sama_3242	0.87	+1.3
3,838,427	+		Sama_3242	0.90	-0.0
3,838,427	+		Sama_3242	0.90	-0.7
3,838,427	+		Sama_3242	0.90	-3.0
3,838,427	+		Sama_3242	0.90	+0.1
3,838,427	+		Sama_3242	0.90	-1.9
3,838,428	-		Sama_3242	0.90	+1.2
3,838,428	-		Sama_3242	0.90	+0.6
3,838,429	+		Sama_3242	0.90	-2.8
3,838,429	+		Sama_3242	0.90	-0.1
3,838,429	+		Sama_3242	0.90	+1.5
3,838,429	+		Sama_3242	0.90	+1.7
3,838,429	+		Sama_3242	0.90	+0.1
3,838,430	-		Sama_3242	0.90	-0.7
3,838,430	-		Sama_3242	0.90	+0.9
3,838,430	-		Sama_3242	0.90	-0.8
3,838,430	-		Sama_3242	0.90	+0.9
3,838,463	-				+0.6
3,838,463	-				+1.2
3,838,463	-				+2.1
3,838,529	+				+0.1
3,838,530	-				+0.1
3,838,653	-				+0.1
3,838,653	-				-0.7
3,838,672	-				-0.3
3,838,683	+				-0.5
3,838,683	+				-0.8
3,838,695	+				+0.4
3,838,695	+				-2.5
3,838,695	+				+0.5
3,838,696	-				-2.0
3,838,696	-				+0.4
3,838,696	-				+1.3
3,838,697	+				-1.4
3,838,697	+				-1.1
3,838,697	+				+3.1
3,838,715	+				-2.0
3,838,716	-				-1.4
3,838,716	-				-1.4
3,838,740	+				-1.9
3,838,740	+				+1.3
3,838,741	-				-0.3
3,838,741	-				-1.0
3,838,741	-				+2.9
3,838,746	-				+0.3
3,838,753	+				+0.1
3,838,837	+		Sama_3243	0.14	-1.0
3,838,837	+		Sama_3243	0.14	+0.2
3,838,837	+		Sama_3243	0.14	+4.3
3,838,837	+		Sama_3243	0.14	+0.9
3,838,837	+		Sama_3243	0.14	-0.6
3,838,837	+		Sama_3243	0.14	-1.5
3,838,837	+		Sama_3243	0.14	-0.3
3,838,837	+		Sama_3243	0.14	+1.9
3,838,837	+		Sama_3243	0.14	-1.7
3,838,837	+		Sama_3243	0.14	+2.1
3,838,837	+		Sama_3243	0.14	+0.4
3,838,837	+		Sama_3243	0.14	+2.3
3,838,837	+		Sama_3243	0.14	+2.4
3,838,837	+		Sama_3243	0.14	-1.5
3,838,837	+		Sama_3243	0.14	+0.4
3,838,838	-		Sama_3243	0.14	+0.5
3,838,838	-		Sama_3243	0.14	-0.8
3,838,838	-		Sama_3243	0.14	+1.4
3,838,838	-		Sama_3243	0.14	+0.3
3,838,838	-		Sama_3243	0.14	-0.3
3,838,838	-		Sama_3243	0.14	+1.9
3,838,838	-		Sama_3243	0.14	-0.3
3,838,838	-		Sama_3243	0.14	-0.7
3,838,838	-		Sama_3243	0.14	-0.1
3,838,838	-		Sama_3243	0.14	+0.2
3,838,838	-		Sama_3243	0.14	-1.6
3,838,838	-		Sama_3243	0.14	-1.5
3,838,838	-		Sama_3243	0.14	+1.3
3,838,838	-		Sama_3243	0.14	+2.9
3,838,838	-		Sama_3243	0.14	+0.6
3,838,838	-		Sama_3243	0.14	-0.7
3,838,838	-		Sama_3243	0.14	+0.8
3,838,838	-		Sama_3243	0.14	-1.5
3,838,838	-		Sama_3243	0.14	-1.7
3,838,838	-		Sama_3243	0.14	-2.5
3,838,838	-		Sama_3243	0.14	-1.2
3,838,838	-		Sama_3243	0.14	-3.4
3,838,838	-		Sama_3243	0.14	-1.0
3,838,838	-		Sama_3243	0.14	+0.0
3,838,838	-		Sama_3243	0.14	+1.8
3,838,838	-		Sama_3243	0.14	-0.5
3,838,839	+		Sama_3243	0.14	+1.8
3,838,840	-		Sama_3243	0.14	-2.6
3,838,840	-		Sama_3243	0.14	+0.9
3,838,884	+		Sama_3243	0.18	+2.9
3,838,885	-		Sama_3243	0.18	+3.4
3,838,885	-		Sama_3243	0.18	+0.3
3,838,885	-		Sama_3243	0.18	+1.3
3,838,952	+		Sama_3243	0.23	-1.6
3,838,953	-		Sama_3243	0.23	+0.9
3,839,016	-		Sama_3243	0.28	+0.1
3,839,148	-		Sama_3243	0.38	+0.9
3,839,197	-		Sama_3243	0.42	+0.1
3,839,349	-		Sama_3243	0.54	+0.5
3,839,459	+		Sama_3243	0.62	+0.3
3,839,460	-		Sama_3243	0.62	-2.3
3,839,460	-		Sama_3243	0.62	+0.1
3,839,491	+		Sama_3243	0.65	-0.9
3,839,491	+		Sama_3243	0.65	-1.2
3,839,492	-		Sama_3243	0.65	+1.2
3,839,492	-		Sama_3243	0.65	+1.9
3,839,492	-		Sama_3243	0.65	-2.3
3,839,494	-		Sama_3243	0.65	+0.3
3,839,547	+		Sama_3243	0.69	+0.0
3,839,547	+		Sama_3243	0.69	-1.5
3,839,548	-		Sama_3243	0.69	-1.4
3,839,549	+		Sama_3243	0.69	-0.3
3,839,549	+		Sama_3243	0.69	-1.1
3,839,549	+		Sama_3243	0.69	+1.5
3,839,549	+		Sama_3243	0.69	-1.4
3,839,549	+		Sama_3243	0.69	+0.9
3,839,549	+		Sama_3243	0.69	-0.6
3,839,549	+		Sama_3243	0.69	+1.0
3,839,550	-		Sama_3243	0.69	+1.7
3,839,550	-		Sama_3243	0.69	-2.4
3,839,550	-		Sama_3243	0.69	-1.4
3,839,550	-		Sama_3243	0.69	+3.7
3,839,550	-		Sama_3243	0.69	-0.9
3,839,550	-		Sama_3243	0.69	+0.2
3,839,550	-		Sama_3243	0.69	+0.6
3,839,550	-		Sama_3243	0.69	-2.1
3,839,601	+		Sama_3243	0.73	-0.1
3,839,601	+		Sama_3243	0.73	+0.1
3,839,695	+		Sama_3243	0.80	-2.0
3,839,696	-		Sama_3243	0.81	-1.0
3,839,696	-		Sama_3243	0.81	+2.1
3,839,696	-		Sama_3243	0.81	-0.6
3,839,696	-		Sama_3243	0.81	+0.2
3,839,753	+		Sama_3243	0.85	+3.0
3,839,754	-		Sama_3243	0.85	+1.1
3,839,754	-		Sama_3243	0.85	+1.8
3,839,785	+		Sama_3243	0.87	-1.8
3,839,786	-		Sama_3243	0.88	-0.5
3,839,786	-		Sama_3243	0.88	+0.7
3,839,801	+		Sama_3243	0.89	-1.3
3,839,802	-		Sama_3243	0.89	+0.7
3,839,852	-				+2.4
3,839,852	-				+2.3
3,839,852	-				+0.1
3,839,869	-				+4.3
3,839,879	-				+0.9
3,839,882	+				-0.1
3,839,882	+				+0.1
3,839,882	+				-1.5
3,839,883	-				-0.8
3,839,883	-				-0.9
3,839,944	+				+0.9
3,839,945	-				-1.3
3,839,977	+				-0.6
3,839,977	+				-1.3
3,839,977	+				-0.0
3,839,977	+				-0.4
3,839,977	+				-0.6
3,839,978	-				+3.3
3,839,978	-				+0.9
3,839,978	-				+0.6
3,839,978	-				-3.6
3,839,979	+				-1.5
3,839,980	-				+1.3
3,839,980	-				-1.3
3,839,980	-				+0.2
3,839,980	-				+1.2
3,839,980	-				-0.4
3,839,980	-				-1.4
3,839,980	-				-0.7
3,839,980	-				+0.9
3,839,980	-				-0.3
3,840,034	+				-1.9
3,840,034	+				-1.2
3,840,070	+		Sama_3244	0.12	-1.2
3,840,070	+		Sama_3244	0.12	+1.2
3,840,070	+		Sama_3244	0.12	+0.9
3,840,128	+		Sama_3244	0.24	+0.0
3,840,128	+		Sama_3244	0.24	+0.1
3,840,128	+		Sama_3244	0.24	-2.5
3,840,128	+		Sama_3244	0.24	+0.4
3,840,129	-		Sama_3244	0.24	+0.4
3,840,129	-		Sama_3244	0.24	-0.7
3,840,129	-		Sama_3244	0.24	-0.6
3,840,129	-		Sama_3244	0.24	+0.1
3,840,130	+		Sama_3244	0.24	+1.9
3,840,130	+		Sama_3244	0.24	+0.6
3,840,131	-		Sama_3244	0.24	+1.4
3,840,131	-		Sama_3244	0.24	+2.2
3,840,210	+		Sama_3244	0.40	-1.0
3,840,282	+		Sama_3244	0.55	+2.6
3,840,282	+		Sama_3244	0.55	+1.0
3,840,282	+		Sama_3244	0.55	+2.6
3,840,283	-		Sama_3244	0.55	+0.6
3,840,283	-		Sama_3244	0.55	+1.4
3,840,283	-		Sama_3244	0.55	+1.3
3,840,283	-		Sama_3244	0.55	-1.5
3,840,283	-		Sama_3244	0.55	-0.6
3,840,283	-		Sama_3244	0.55	+0.0
3,840,395	+		Sama_3244	0.78	+1.1
3,840,396	-		Sama_3244	0.78	+0.8
3,840,396	-		Sama_3244	0.78	-0.7
3,840,413	-		Sama_3244	0.82	-2.1
3,840,500	+				-0.8
3,840,500	+				-1.5
3,840,500	+				+2.0
3,840,501	-				+1.4
3,840,515	+				-0.5
3,840,516	-				-0.0
3,840,516	-				+1.5
3,840,516	-				+1.5
3,840,577	+				+0.5
3,840,595	+		Sama_3245	0.13	+0.9
3,840,604	+		Sama_3245	0.14	+0.7
3,840,604	+		Sama_3245	0.14	-0.6
3,840,605	-		Sama_3245	0.14	-0.6
3,840,605	-		Sama_3245	0.14	+4.1
3,840,605	-		Sama_3245	0.14	-1.9
3,840,605	-		Sama_3245	0.14	+2.9
3,840,608	+		Sama_3245	0.15	+0.7
3,840,608	+		Sama_3245	0.15	+3.2
3,840,608	+		Sama_3245	0.15	+0.8
3,840,608	+		Sama_3245	0.15	+0.6
3,840,609	-		Sama_3245	0.15	-1.7
3,840,609	-		Sama_3245	0.15	+1.4
3,840,616	+		Sama_3245	0.16	-1.6
3,840,616	+		Sama_3245	0.16	-0.1
3,840,631	+		Sama_3245	0.19	+0.1
3,840,632	-		Sama_3245	0.19	+0.5
3,840,659	-		Sama_3245	0.24	+1.4
3,840,672	-		Sama_3245	0.26	+2.5
3,840,702	-		Sama_3245	0.31	-0.0
3,840,770	-		Sama_3245	0.43	+0.1
3,840,770	-		Sama_3245	0.43	+3.1
3,840,820	+		Sama_3245	0.51	-1.0
3,840,820	+		Sama_3245	0.51	+3.4
3,840,820	+		Sama_3245	0.51	-0.6
3,840,821	-		Sama_3245	0.51	+1.4
3,840,879	+		Sama_3245	0.61	+0.1
3,840,890	-		Sama_3245	0.63	-0.6
3,840,890	-		Sama_3245	0.63	+0.8
3,840,940	+		Sama_3245	0.71	+1.5
3,840,940	+		Sama_3245	0.71	+0.3
3,840,940	+		Sama_3245	0.71	+3.6
3,840,940	+		Sama_3245	0.71	+1.0
3,840,941	-		Sama_3245	0.72	+1.3
3,840,941	-		Sama_3245	0.72	+1.7
3,840,941	-		Sama_3245	0.72	+1.2