Strain Fitness in Shewanella amazonensis SB2B around Sama_2940

Experiment: L-Histidine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Histidine (N)
3,494,286	+		Sama_2939	0.64	-1.0
3,494,335	-		Sama_2939	0.68	-0.1
3,494,378	-		Sama_2939	0.72	-1.4
3,494,378	-		Sama_2939	0.72	-0.3
3,494,395	+		Sama_2939	0.73	+0.4
3,494,423	+		Sama_2939	0.75	-0.8
3,494,424	-		Sama_2939	0.75	-1.1
3,494,441	+		Sama_2939	0.77	-1.1
3,494,441	+		Sama_2939	0.77	-1.2
3,494,442	-		Sama_2939	0.77	-0.0
3,494,442	-		Sama_2939	0.77	-2.2
3,494,446	+		Sama_2939	0.77	-1.2
3,494,472	+		Sama_2939	0.79	-1.9
3,494,473	-		Sama_2939	0.80	-0.1
3,494,473	-		Sama_2939	0.80	-0.3
3,494,473	-		Sama_2939	0.80	-0.1
3,494,544	+		Sama_2939	0.86	-0.7
3,494,556	+		Sama_2939	0.87	-0.7
3,494,556	+		Sama_2939	0.87	-2.5
3,494,556	+		Sama_2939	0.87	-0.3
3,494,556	+		Sama_2939	0.87	+0.2
3,494,556	+		Sama_2939	0.87	-1.6
3,494,557	-		Sama_2939	0.87	-1.2
3,494,557	-		Sama_2939	0.87	-2.1
3,494,557	-		Sama_2939	0.87	-3.0
3,494,557	-		Sama_2939	0.87	-2.1
3,494,557	-		Sama_2939	0.87	-0.5
3,494,568	+		Sama_2939	0.88	-0.1
3,494,568	+		Sama_2939	0.88	-0.6
3,494,568	+		Sama_2939	0.88	-1.4
3,494,568	+		Sama_2939	0.88	-0.5
3,494,568	+		Sama_2939	0.88	-1.1
3,494,568	+		Sama_2939	0.88	-2.6
3,494,568	+		Sama_2939	0.88	-1.5
3,494,568	+		Sama_2939	0.88	-0.8
3,494,568	+		Sama_2939	0.88	-2.0
3,494,568	+		Sama_2939	0.88	-1.1
3,494,568	+		Sama_2939	0.88	-2.5
3,494,568	+		Sama_2939	0.88	-1.0
3,494,568	+		Sama_2939	0.88	-2.4
3,494,568	+		Sama_2939	0.88	-1.3
3,494,568	+		Sama_2939	0.88	-0.2
3,494,568	+		Sama_2939	0.88	+1.1
3,494,568	+		Sama_2939	0.88	+1.4
3,494,568	+		Sama_2939	0.88	-1.4
3,494,568	+		Sama_2939	0.88	-0.3
3,494,568	+		Sama_2939	0.88	-2.4
3,494,568	+		Sama_2939	0.88	-0.7
3,494,569	-		Sama_2939	0.88	+0.3
3,494,569	-		Sama_2939	0.88	-2.8
3,494,569	-		Sama_2939	0.88	-1.5
3,494,569	-		Sama_2939	0.88	-2.1
3,494,569	-		Sama_2939	0.88	+2.3
3,494,569	-		Sama_2939	0.88	+0.3
3,494,569	-		Sama_2939	0.88	-0.0
3,494,569	-		Sama_2939	0.88	-0.2
3,494,569	-		Sama_2939	0.88	-0.6
3,494,569	-		Sama_2939	0.88	-1.2
3,494,569	-		Sama_2939	0.88	-2.2
3,494,569	-		Sama_2939	0.88	-0.5
3,494,569	-		Sama_2939	0.88	+1.6
3,494,569	-		Sama_2939	0.88	-2.0
3,494,569	-		Sama_2939	0.88	-1.3
3,494,569	-		Sama_2939	0.88	-0.4
3,494,569	-		Sama_2939	0.88	-1.1
3,494,569	-		Sama_2939	0.88	-2.0
3,494,569	-		Sama_2939	0.88	-0.2
3,494,569	-		Sama_2939	0.88	-1.1
3,494,569	-		Sama_2939	0.88	+1.0
3,494,569	-		Sama_2939	0.88	-1.5
3,494,570	+		Sama_2939	0.88	-2.0
3,494,570	+		Sama_2939	0.88	-2.0
3,494,570	+		Sama_2939	0.88	-1.5
3,494,571	-		Sama_2939	0.88	-0.4
3,494,571	-		Sama_2939	0.88	+1.7
3,494,571	-		Sama_2939	0.88	-3.3
3,494,571	-		Sama_2939	0.88	-1.6
3,494,571	-		Sama_2939	0.88	+1.3
3,494,571	-		Sama_2939	0.88	-0.8
3,494,571	-		Sama_2939	0.88	+0.9
3,494,571	-		Sama_2939	0.88	-1.5
3,494,571	-		Sama_2939	0.88	-0.8
3,494,602	+				-1.0
3,494,602	+				+0.4
3,494,603	-				-1.4
3,494,739	+				-0.8
3,494,750	+				-1.0
3,494,750	+				-0.8
3,494,750	+				+0.9
3,494,750	+				-2.5
3,494,751	-				-0.6
3,494,751	-				-0.8
3,494,751	-				+1.9
3,494,751	-				+1.3
3,494,751	-				-3.2
3,494,754	+				-2.6
3,494,754	+				-2.1
3,494,754	+				-1.7
3,494,755	-				-4.4
3,494,755	-				-1.7
3,494,755	-				-0.5
3,494,756	+				-0.4
3,494,756	+				+0.5
3,494,756	+				-1.1
3,494,756	+				-2.0
3,494,756	+				-2.1
3,494,756	+				-4.1
3,494,756	+				-0.1
3,494,756	+				-1.8
3,494,756	+				-0.2
3,494,756	+				-0.1
3,494,757	-				-2.9
3,494,757	-				-3.0
3,494,757	-				-1.8
3,494,757	-				-1.2
3,494,757	-				-1.4
3,494,757	-				-1.8
3,494,757	-				-3.8
3,494,757	-				-2.3
3,494,757	-				-2.2
3,494,757	-				-1.7
3,494,757	-				-1.2
3,494,757	-				-0.5
3,494,760	+				-1.2
3,494,760	+				-1.7
3,494,760	+				-0.1
3,494,760	+				-0.3
3,494,760	+				-0.1
3,494,760	+				-0.4
3,494,761	-				-0.6
3,494,761	-				-2.4
3,494,761	-				-2.2
3,494,761	-				-2.6
3,494,761	-				-2.3
3,494,761	-				-2.0
3,494,838	+				-1.1
3,494,839	-				-0.4
3,494,862	+				+0.1
3,494,862	+				+0.3
3,494,863	-				-1.7
3,494,947	+				-1.6
3,494,992	+				-1.1
3,494,992	+				-1.6
3,494,993	-				+0.2
3,494,993	-				-1.5
3,494,993	-				-2.3
3,494,993	-				-0.6
3,494,993	-				-1.7
3,494,993	-				+0.5
3,494,993	-				-1.7
3,494,994	+				+0.3
3,494,994	+				-1.8
3,494,994	+				-1.4
3,494,994	+				-3.5
3,494,994	+				-1.1
3,494,995	-				-1.8
3,494,995	-				-0.4
3,494,995	-				-2.9
3,494,995	-				-2.8
3,494,995	-				-2.2
3,494,995	-				-1.3
3,494,995	-				-4.2
3,494,995	-				-2.7
3,495,020	+				-0.6
3,495,020	+				-0.6
3,495,020	+				+0.8
3,495,047	-				-2.7
3,495,047	-				+0.0
3,495,082	+				-0.2
3,495,082	+				+2.2
3,495,083	-				-1.8
3,495,123	-				-0.2
3,495,133	+				+2.0
3,495,133	+				+0.7
3,495,133	+				-1.4
3,495,133	+				+0.5
3,495,134	-				+0.9
3,495,134	-				-0.0
3,495,134	-				-1.6
3,495,134	-				-1.7
3,495,134	-				+0.9
3,495,134	-				-1.3
3,495,134	-				-1.1
3,495,140	-				-2.0
3,495,140	-				-2.4
3,495,197	+				-1.9
3,495,197	+				-2.1
3,495,197	+				-2.0
3,495,197	+				-0.3
3,495,197	+				-2.9
3,495,198	-				-2.7
3,495,198	-				-1.5
3,495,198	-				-1.7
3,495,198	-				-3.5
3,495,242	+				-1.8
3,495,242	+				-0.3
3,495,444	-		Sama_2940	0.45	-2.7
3,495,484	+		Sama_2940	0.52	-3.2
3,495,526	-		Sama_2940	0.59	-3.5
3,495,599	+		Sama_2940	0.72	-3.2
3,495,599	+		Sama_2940	0.72	-1.4
3,495,599	+		Sama_2940	0.72	-2.0
3,495,599	+		Sama_2940	0.72	-1.4
3,495,599	+		Sama_2940	0.72	-2.2
3,495,599	+		Sama_2940	0.72	-0.7
3,495,599	+		Sama_2940	0.72	-2.5
3,495,599	+		Sama_2940	0.72	-3.6
3,495,599	+		Sama_2940	0.72	-1.0
3,495,599	+		Sama_2940	0.72	-1.7
3,495,599	+		Sama_2940	0.72	-1.5
3,495,599	+		Sama_2940	0.72	-2.6
3,495,599	+		Sama_2940	0.72	-1.2
3,495,599	+		Sama_2940	0.72	-1.1
3,495,600	-		Sama_2940	0.73	-2.3
3,495,600	-		Sama_2940	0.73	-1.8
3,495,600	-		Sama_2940	0.73	-2.0
3,495,600	-		Sama_2940	0.73	-1.1
3,495,600	-		Sama_2940	0.73	-3.4
3,495,602	+		Sama_2940	0.73	-1.8
3,495,602	+		Sama_2940	0.73	-4.0
3,495,602	+		Sama_2940	0.73	-4.1
3,495,602	+		Sama_2940	0.73	-1.2
3,495,603	-		Sama_2940	0.73	-1.3
3,495,603	-		Sama_2940	0.73	-1.5
3,495,638	+		Sama_2940	0.79	-3.3
3,495,638	+		Sama_2940	0.79	-0.8
3,495,638	+		Sama_2940	0.79	-2.3
3,495,638	+		Sama_2940	0.79	-2.3
3,495,639	-		Sama_2940	0.80	-1.2
3,495,639	-		Sama_2940	0.80	+0.0
3,495,644	+		Sama_2940	0.80	-1.5
3,495,644	+		Sama_2940	0.80	-1.6
3,495,644	+		Sama_2940	0.80	-1.5
3,495,644	+		Sama_2940	0.80	-4.0
3,495,645	-		Sama_2940	0.81	-3.0
3,495,757	+				+1.5
3,495,768	+				-0.3
3,495,768	+				-2.6
3,495,768	+				-1.8
3,495,769	-				+2.1
3,495,769	-				+2.1
3,495,769	-				-2.8
3,495,843	+				+0.2
3,495,843	+				-0.3
3,495,844	-				+0.1
3,495,860	-				+2.6
3,496,014	+		Sama_2941	0.12	+1.0
3,496,014	+		Sama_2941	0.12	-1.4
3,496,014	+		Sama_2941	0.12	+1.3
3,496,014	+		Sama_2941	0.12	+0.6
3,496,015	-		Sama_2941	0.12	-1.0
3,496,078	+		Sama_2941	0.16	-0.3
3,496,078	+		Sama_2941	0.16	-0.9
3,496,125	+		Sama_2941	0.19	+3.4
3,496,126	-		Sama_2941	0.19	-0.7
3,496,126	-		Sama_2941	0.19	-0.3
3,496,126	-		Sama_2941	0.19	-0.1
3,496,126	-		Sama_2941	0.19	+2.9
3,496,266	+		Sama_2941	0.29	-1.1
3,496,266	+		Sama_2941	0.29	+1.8
3,496,266	+		Sama_2941	0.29	-1.6
3,496,302	+		Sama_2941	0.31	-1.7
3,496,302	+		Sama_2941	0.31	+2.8
3,496,303	-		Sama_2941	0.31	+1.7
3,496,346	+		Sama_2941	0.34	-3.5
3,496,346	+		Sama_2941	0.34	-2.3
3,496,401	+		Sama_2941	0.38	+0.1
3,496,402	-		Sama_2941	0.38	+2.3
3,496,414	+		Sama_2941	0.39	+2.0
3,496,414	+		Sama_2941	0.39	+1.5
3,496,414	+		Sama_2941	0.39	-0.5
3,496,415	-		Sama_2941	0.39	-0.0
3,496,415	-		Sama_2941	0.39	+0.3
3,496,430	+		Sama_2941	0.40	-2.4
3,496,469	+		Sama_2941	0.43	-0.0
3,496,469	+		Sama_2941	0.43	+0.4
3,496,470	-		Sama_2941	0.43	+3.3
3,496,470	-		Sama_2941	0.43	-1.3
3,496,474	+		Sama_2941	0.43	+1.7
3,496,475	-		Sama_2941	0.43	+0.4
3,496,475	-		Sama_2941	0.43	-3.1
3,496,475	-		Sama_2941	0.43	+1.2
3,496,475	-		Sama_2941	0.43	-0.8
3,496,483	-		Sama_2941	0.44	-2.2
3,496,500	+		Sama_2941	0.45	-3.1
3,496,500	+		Sama_2941	0.45	+2.2
3,496,501	-		Sama_2941	0.45	-0.1
3,496,501	-		Sama_2941	0.45	-0.1
3,496,501	-		Sama_2941	0.45	+1.3
3,496,558	+		Sama_2941	0.49	+1.4
3,496,559	-		Sama_2941	0.49	+1.0
3,496,559	-		Sama_2941	0.49	-1.6
3,496,559	-		Sama_2941	0.49	+0.0
3,496,607	+		Sama_2941	0.52	-2.8
3,496,607	+		Sama_2941	0.52	-1.0
3,496,607	+		Sama_2941	0.52	-0.4
3,496,608	-		Sama_2941	0.52	+4.1
3,496,608	-		Sama_2941	0.52	-0.7
3,496,608	-		Sama_2941	0.52	-1.7
3,496,608	-		Sama_2941	0.52	-1.5
3,496,608	-		Sama_2941	0.52	-1.7
3,496,640	+		Sama_2941	0.54	+1.3
3,496,641	-		Sama_2941	0.54	+0.8
3,496,641	-		Sama_2941	0.54	+2.4
3,496,641	-		Sama_2941	0.54	-1.0
3,496,641	-		Sama_2941	0.54	+0.9
3,496,649	+		Sama_2941	0.55	+0.1
3,496,650	-		Sama_2941	0.55	-0.6
3,496,650	-		Sama_2941	0.55	+1.5
3,496,732	-		Sama_2941	0.61	+1.5
3,496,732	-		Sama_2941	0.61	-0.8
3,496,750	-		Sama_2941	0.62	+1.2