Strain Fitness in Shewanella amazonensis SB2B around Sama_2939

Experiment: L-Histidine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Histidine (N)
3,492,544	+		Sama_2938	0.62	-1.2
3,492,626	-		Sama_2938	0.66	+2.7
3,492,660	+		Sama_2938	0.67	-0.8
3,492,660	+		Sama_2938	0.67	-2.1
3,492,660	+		Sama_2938	0.67	+1.1
3,492,660	+		Sama_2938	0.67	+2.7
3,492,660	+		Sama_2938	0.67	-0.4
3,492,661	-		Sama_2938	0.67	-1.3
3,492,669	+		Sama_2938	0.68	+2.4
3,492,678	+		Sama_2938	0.68	+2.4
3,492,679	-		Sama_2938	0.68	-0.1
3,492,679	-		Sama_2938	0.68	-0.6
3,492,726	+		Sama_2938	0.70	-0.7
3,492,727	-		Sama_2938	0.70	-2.7
3,492,727	-		Sama_2938	0.70	-0.1
3,492,730	+		Sama_2938	0.70	+0.9
3,492,730	+		Sama_2938	0.70	+1.3
3,492,731	-		Sama_2938	0.70	-1.3
3,492,731	-		Sama_2938	0.70	-1.7
3,492,751	+		Sama_2938	0.71	+0.4
3,492,751	+		Sama_2938	0.71	-0.6
3,492,777	+		Sama_2938	0.72	-1.6
3,492,795	+		Sama_2938	0.73	-0.1
3,492,795	+		Sama_2938	0.73	+1.5
3,492,795	+		Sama_2938	0.73	+1.3
3,492,795	+		Sama_2938	0.73	-1.2
3,492,795	+		Sama_2938	0.73	+0.5
3,492,795	+		Sama_2938	0.73	+0.0
3,492,795	+		Sama_2938	0.73	-1.1
3,492,795	+		Sama_2938	0.73	-0.2
3,492,795	+		Sama_2938	0.73	-0.0
3,492,795	+		Sama_2938	0.73	+0.0
3,492,795	+		Sama_2938	0.73	-1.9
3,492,795	+		Sama_2938	0.73	-0.3
3,492,795	+		Sama_2938	0.73	-0.2
3,492,796	-		Sama_2938	0.73	-0.2
3,492,796	-		Sama_2938	0.73	-0.4
3,492,796	-		Sama_2938	0.73	-2.5
3,492,796	-		Sama_2938	0.73	+0.0
3,492,796	-		Sama_2938	0.73	-0.8
3,492,796	-		Sama_2938	0.73	-1.0
3,492,798	+		Sama_2938	0.73	+1.2
3,492,798	+		Sama_2938	0.73	+0.7
3,492,798	+		Sama_2938	0.73	-1.7
3,492,799	-		Sama_2938	0.73	-0.5
3,492,799	-		Sama_2938	0.73	-0.7
3,492,822	+		Sama_2938	0.74	-1.1
3,492,822	+		Sama_2938	0.74	-1.1
3,492,822	+		Sama_2938	0.74	-0.5
3,492,824	+		Sama_2938	0.75	-1.2
3,492,824	+		Sama_2938	0.75	+0.7
3,492,824	+		Sama_2938	0.75	+0.1
3,492,824	+		Sama_2938	0.75	-0.8
3,492,824	+		Sama_2938	0.75	-0.5
3,492,824	+		Sama_2938	0.75	-0.3
3,492,825	-		Sama_2938	0.75	-2.4
3,492,825	-		Sama_2938	0.75	-1.3
3,492,825	-		Sama_2938	0.75	+0.3
3,492,837	+		Sama_2938	0.75	+0.7
3,492,888	-		Sama_2938	0.77	+4.3
3,492,888	-		Sama_2938	0.77	+2.9
3,492,888	-		Sama_2938	0.77	+1.4
3,492,888	-		Sama_2938	0.77	-1.4
3,492,897	+		Sama_2938	0.78	-1.3
3,492,898	-		Sama_2938	0.78	-0.9
3,492,972	+		Sama_2938	0.81	-0.4
3,492,972	+		Sama_2938	0.81	-0.6
3,492,972	+		Sama_2938	0.81	+1.9
3,492,972	+		Sama_2938	0.81	-0.3
3,492,972	+		Sama_2938	0.81	-0.5
3,492,972	+		Sama_2938	0.81	-1.5
3,492,973	-		Sama_2938	0.81	+0.5
3,492,973	-		Sama_2938	0.81	-0.3
3,492,973	-		Sama_2938	0.81	+0.6
3,492,973	-		Sama_2938	0.81	+1.7
3,492,973	-		Sama_2938	0.81	-0.3
3,492,973	-		Sama_2938	0.81	-0.4
3,492,973	-		Sama_2938	0.81	-0.8
3,492,973	-		Sama_2938	0.81	+1.4
3,492,974	+		Sama_2938	0.81	+4.0
3,492,974	+		Sama_2938	0.81	-1.2
3,492,975	-		Sama_2938	0.81	-0.2
3,492,975	-		Sama_2938	0.81	+1.0
3,493,065	+		Sama_2938	0.85	+0.6
3,493,065	+		Sama_2938	0.85	-0.7
3,493,066	-		Sama_2938	0.85	+1.9
3,493,066	-		Sama_2938	0.85	-0.3
3,493,080	+		Sama_2938	0.86	+1.3
3,493,081	-		Sama_2938	0.86	-1.5
3,493,081	-		Sama_2938	0.86	+4.3
3,493,081	-		Sama_2938	0.86	-2.2
3,493,189	+				+0.8
3,493,189	+				-0.6
3,493,264	+				-0.3
3,493,264	+				+1.3
3,493,264	+				-0.1
3,493,264	+				+1.7
3,493,264	+				+0.1
3,493,265	-				-1.0
3,493,265	-				-1.5
3,493,265	-				+0.5
3,493,265	-				+1.8
3,493,265	-				+3.3
3,493,265	-				-1.2
3,493,265	-				-0.5
3,493,265	-				+1.6
3,493,265	-				+0.0
3,493,333	+				+1.6
3,493,334	-				-0.1
3,493,334	-				-1.6
3,493,334	-				+0.0
3,493,334	-				+0.0
3,493,346	-				-0.4
3,493,381	+				-1.1
3,493,382	-				-1.4
3,493,382	-				-0.6
3,493,389	+				-3.1
3,493,389	+				+0.3
3,493,389	+				+1.1
3,493,389	+				+0.1
3,493,390	-				-0.3
3,493,390	-				+1.6
3,493,390	-				+1.6
3,493,413	+				-1.6
3,493,413	+				-1.7
3,493,414	-				+1.1
3,493,414	-				+0.0
3,493,473	-				+2.0
3,493,484	-				+0.3
3,493,484	-				-2.0
3,493,484	-				-0.7
3,493,484	-				+0.4
3,493,484	-				+1.7
3,493,484	-				+0.4
3,493,529	+				-1.6
3,493,557	+				-1.1
3,493,558	-				-2.3
3,493,677	+		Sama_2939	0.13	-2.6
3,493,678	-		Sama_2939	0.13	-1.7
3,493,678	-		Sama_2939	0.13	-2.2
3,493,757	-		Sama_2939	0.19	-1.3
3,493,757	-		Sama_2939	0.19	-0.8
3,493,767	+		Sama_2939	0.20	-1.0
3,493,767	+		Sama_2939	0.20	-0.2
3,493,768	-		Sama_2939	0.20	-0.8
3,493,768	-		Sama_2939	0.20	-2.1
3,493,847	-		Sama_2939	0.27	-2.7
3,493,847	-		Sama_2939	0.27	-1.0
3,493,941	+		Sama_2939	0.35	-1.0
3,493,942	-		Sama_2939	0.35	-2.8
3,493,942	-		Sama_2939	0.35	-0.7
3,493,942	-		Sama_2939	0.35	-2.9
3,494,021	+		Sama_2939	0.41	-1.8
3,494,021	+		Sama_2939	0.41	-1.7
3,494,021	+		Sama_2939	0.41	-0.7
3,494,022	-		Sama_2939	0.42	-1.3
3,494,022	-		Sama_2939	0.42	-0.9
3,494,022	-		Sama_2939	0.42	-0.5
3,494,022	-		Sama_2939	0.42	-2.1
3,494,022	-		Sama_2939	0.42	-0.9
3,494,022	-		Sama_2939	0.42	-1.2
3,494,022	-		Sama_2939	0.42	-0.8
3,494,022	-		Sama_2939	0.42	+0.4
3,494,022	-		Sama_2939	0.42	+0.8
3,494,091	-		Sama_2939	0.47	-0.8
3,494,109	+		Sama_2939	0.49	-0.3
3,494,109	+		Sama_2939	0.49	-1.7
3,494,109	+		Sama_2939	0.49	+0.3
3,494,110	-		Sama_2939	0.49	-1.5
3,494,110	-		Sama_2939	0.49	-1.1
3,494,134	-		Sama_2939	0.51	-0.7
3,494,134	-		Sama_2939	0.51	-1.5
3,494,134	-		Sama_2939	0.51	-0.7
3,494,137	+		Sama_2939	0.51	+0.0
3,494,137	+		Sama_2939	0.51	-1.8
3,494,137	+		Sama_2939	0.51	-1.3
3,494,148	+		Sama_2939	0.52	-0.7
3,494,148	+		Sama_2939	0.52	+0.6
3,494,149	-		Sama_2939	0.52	-1.4
3,494,149	-		Sama_2939	0.52	-2.5
3,494,286	+		Sama_2939	0.64	-1.0
3,494,335	-		Sama_2939	0.68	-0.1
3,494,378	-		Sama_2939	0.72	-1.4
3,494,378	-		Sama_2939	0.72	-0.3
3,494,395	+		Sama_2939	0.73	+0.4
3,494,423	+		Sama_2939	0.75	-0.8
3,494,424	-		Sama_2939	0.75	-1.1
3,494,441	+		Sama_2939	0.77	-1.1
3,494,441	+		Sama_2939	0.77	-1.2
3,494,442	-		Sama_2939	0.77	-0.0
3,494,442	-		Sama_2939	0.77	-2.2
3,494,446	+		Sama_2939	0.77	-1.2
3,494,472	+		Sama_2939	0.79	-1.9
3,494,473	-		Sama_2939	0.80	-0.1
3,494,473	-		Sama_2939	0.80	-0.3
3,494,473	-		Sama_2939	0.80	-0.1
3,494,544	+		Sama_2939	0.86	-0.7
3,494,556	+		Sama_2939	0.87	-0.7
3,494,556	+		Sama_2939	0.87	-2.5
3,494,556	+		Sama_2939	0.87	-0.3
3,494,556	+		Sama_2939	0.87	+0.2
3,494,556	+		Sama_2939	0.87	-1.6
3,494,557	-		Sama_2939	0.87	-1.2
3,494,557	-		Sama_2939	0.87	-2.1
3,494,557	-		Sama_2939	0.87	-3.0
3,494,557	-		Sama_2939	0.87	-2.1
3,494,557	-		Sama_2939	0.87	-0.5
3,494,568	+		Sama_2939	0.88	-0.1
3,494,568	+		Sama_2939	0.88	-0.6
3,494,568	+		Sama_2939	0.88	-1.4
3,494,568	+		Sama_2939	0.88	-0.5
3,494,568	+		Sama_2939	0.88	-1.1
3,494,568	+		Sama_2939	0.88	-2.6
3,494,568	+		Sama_2939	0.88	-1.5
3,494,568	+		Sama_2939	0.88	-0.8
3,494,568	+		Sama_2939	0.88	-2.0
3,494,568	+		Sama_2939	0.88	-1.1
3,494,568	+		Sama_2939	0.88	-2.5
3,494,568	+		Sama_2939	0.88	-1.0
3,494,568	+		Sama_2939	0.88	-2.4
3,494,568	+		Sama_2939	0.88	-1.3
3,494,568	+		Sama_2939	0.88	-0.2
3,494,568	+		Sama_2939	0.88	+1.1
3,494,568	+		Sama_2939	0.88	+1.4
3,494,568	+		Sama_2939	0.88	-1.4
3,494,568	+		Sama_2939	0.88	-0.3
3,494,568	+		Sama_2939	0.88	-2.4
3,494,568	+		Sama_2939	0.88	-0.7
3,494,569	-		Sama_2939	0.88	+0.3
3,494,569	-		Sama_2939	0.88	-2.8
3,494,569	-		Sama_2939	0.88	-1.5
3,494,569	-		Sama_2939	0.88	-2.1
3,494,569	-		Sama_2939	0.88	+2.3
3,494,569	-		Sama_2939	0.88	+0.3
3,494,569	-		Sama_2939	0.88	-0.0
3,494,569	-		Sama_2939	0.88	-0.2
3,494,569	-		Sama_2939	0.88	-0.6
3,494,569	-		Sama_2939	0.88	-1.2
3,494,569	-		Sama_2939	0.88	-2.2
3,494,569	-		Sama_2939	0.88	-0.5
3,494,569	-		Sama_2939	0.88	+1.6
3,494,569	-		Sama_2939	0.88	-2.0
3,494,569	-		Sama_2939	0.88	-1.3
3,494,569	-		Sama_2939	0.88	-0.4
3,494,569	-		Sama_2939	0.88	-1.1
3,494,569	-		Sama_2939	0.88	-2.0
3,494,569	-		Sama_2939	0.88	-0.2
3,494,569	-		Sama_2939	0.88	-1.1
3,494,569	-		Sama_2939	0.88	+1.0
3,494,569	-		Sama_2939	0.88	-1.5
3,494,570	+		Sama_2939	0.88	-2.0
3,494,570	+		Sama_2939	0.88	-2.0
3,494,570	+		Sama_2939	0.88	-1.5
3,494,571	-		Sama_2939	0.88	-0.4
3,494,571	-		Sama_2939	0.88	+1.7
3,494,571	-		Sama_2939	0.88	-3.3
3,494,571	-		Sama_2939	0.88	-1.6
3,494,571	-		Sama_2939	0.88	+1.3
3,494,571	-		Sama_2939	0.88	-0.8
3,494,571	-		Sama_2939	0.88	+0.9
3,494,571	-		Sama_2939	0.88	-1.5
3,494,571	-		Sama_2939	0.88	-0.8
3,494,602	+				-1.0
3,494,602	+				+0.4
3,494,603	-				-1.4
3,494,739	+				-0.8
3,494,750	+				-1.0
3,494,750	+				-0.8
3,494,750	+				+0.9
3,494,750	+				-2.5
3,494,751	-				-0.6
3,494,751	-				-0.8
3,494,751	-				+1.9
3,494,751	-				+1.3
3,494,751	-				-3.2
3,494,754	+				-2.6
3,494,754	+				-2.1
3,494,754	+				-1.7
3,494,755	-				-4.4
3,494,755	-				-1.7
3,494,755	-				-0.5
3,494,756	+				-0.4
3,494,756	+				+0.5
3,494,756	+				-1.1
3,494,756	+				-2.0
3,494,756	+				-2.1
3,494,756	+				-4.1
3,494,756	+				-0.1
3,494,756	+				-1.8
3,494,756	+				-0.2
3,494,756	+				-0.1
3,494,757	-				-2.9
3,494,757	-				-3.0
3,494,757	-				-1.8
3,494,757	-				-1.2
3,494,757	-				-1.4
3,494,757	-				-1.8
3,494,757	-				-3.8
3,494,757	-				-2.3
3,494,757	-				-2.2
3,494,757	-				-1.7
3,494,757	-				-1.2
3,494,757	-				-0.5
3,494,760	+				-1.2
3,494,760	+				-1.7
3,494,760	+				-0.1
3,494,760	+				-0.3
3,494,760	+				-0.1
3,494,760	+				-0.4
3,494,761	-				-0.6
3,494,761	-				-2.4
3,494,761	-				-2.2
3,494,761	-				-2.6
3,494,761	-				-2.3
3,494,761	-				-2.0
3,494,838	+				-1.1
3,494,839	-				-0.4
3,494,862	+				+0.1
3,494,862	+				+0.3
3,494,863	-				-1.7
3,494,947	+				-1.6
3,494,992	+				-1.1
3,494,992	+				-1.6
3,494,993	-				+0.2
3,494,993	-				-1.5
3,494,993	-				-2.3
3,494,993	-				-0.6
3,494,993	-				-1.7
3,494,993	-				+0.5
3,494,993	-				-1.7
3,494,994	+				+0.3
3,494,994	+				-1.8
3,494,994	+				-1.4
3,494,994	+				-3.5
3,494,994	+				-1.1
3,494,995	-				-1.8
3,494,995	-				-0.4
3,494,995	-				-2.9
3,494,995	-				-2.8
3,494,995	-				-2.2
3,494,995	-				-1.3
3,494,995	-				-4.2
3,494,995	-				-2.7
3,495,020	+				-0.6
3,495,020	+				-0.6
3,495,020	+				+0.8
3,495,047	-				-2.7
3,495,047	-				+0.0
3,495,082	+				-0.2
3,495,082	+				+2.2
3,495,083	-				-1.8
3,495,123	-				-0.2
3,495,133	+				+2.0
3,495,133	+				+0.7
3,495,133	+				-1.4
3,495,133	+				+0.5
3,495,134	-				+0.9
3,495,134	-				-0.0
3,495,134	-				-1.6
3,495,134	-				-1.7
3,495,134	-				+0.9
3,495,134	-				-1.3
3,495,134	-				-1.1
3,495,140	-				-2.0
3,495,140	-				-2.4
3,495,197	+				-1.9
3,495,197	+				-2.1
3,495,197	+				-2.0
3,495,197	+				-0.3
3,495,197	+				-2.9
3,495,198	-				-2.7
3,495,198	-				-1.5
3,495,198	-				-1.7
3,495,198	-				-3.5
3,495,242	+				-1.8
3,495,242	+				-0.3
3,495,444	-		Sama_2940	0.45	-2.7
3,495,484	+		Sama_2940	0.52	-3.2
3,495,526	-		Sama_2940	0.59	-3.5
3,495,599	+		Sama_2940	0.72	-3.2
3,495,599	+		Sama_2940	0.72	-1.4
3,495,599	+		Sama_2940	0.72	-2.0
3,495,599	+		Sama_2940	0.72	-1.4
3,495,599	+		Sama_2940	0.72	-2.2
3,495,599	+		Sama_2940	0.72	-0.7
3,495,599	+		Sama_2940	0.72	-2.5
3,495,599	+		Sama_2940	0.72	-3.6
3,495,599	+		Sama_2940	0.72	-1.0
3,495,599	+		Sama_2940	0.72	-1.7
3,495,599	+		Sama_2940	0.72	-1.5
3,495,599	+		Sama_2940	0.72	-2.6
3,495,599	+		Sama_2940	0.72	-1.2
3,495,599	+		Sama_2940	0.72	-1.1
3,495,600	-		Sama_2940	0.73	-2.3
3,495,600	-		Sama_2940	0.73	-1.8
3,495,600	-		Sama_2940	0.73	-2.0
3,495,600	-		Sama_2940	0.73	-1.1
3,495,600	-		Sama_2940	0.73	-3.4
3,495,602	+		Sama_2940	0.73	-1.8
3,495,602	+		Sama_2940	0.73	-4.0
3,495,602	+		Sama_2940	0.73	-4.1
3,495,602	+		Sama_2940	0.73	-1.2
3,495,603	-		Sama_2940	0.73	-1.3
3,495,603	-		Sama_2940	0.73	-1.5
3,495,638	+		Sama_2940	0.79	-3.3
3,495,638	+		Sama_2940	0.79	-0.8
3,495,638	+		Sama_2940	0.79	-2.3
3,495,638	+		Sama_2940	0.79	-2.3
3,495,639	-		Sama_2940	0.80	-1.2
3,495,639	-		Sama_2940	0.80	+0.0
3,495,644	+		Sama_2940	0.80	-1.5
3,495,644	+		Sama_2940	0.80	-1.6
3,495,644	+		Sama_2940	0.80	-1.5
3,495,644	+		Sama_2940	0.80	-4.0
3,495,645	-		Sama_2940	0.81	-3.0