Strain Fitness in Shewanella amazonensis SB2B around Sama_2910

Experiment: L-Histidine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Histidine (N)
3,458,860	+		Sama_2909	0.11	-1.1
3,458,861	-		Sama_2909	0.11	-0.2
3,458,877	+		Sama_2909	0.12	+0.6
3,458,878	-		Sama_2909	0.13	-1.9
3,458,881	+		Sama_2909	0.13	-2.2
3,458,883	+		Sama_2909	0.13	-1.3
3,458,884	-		Sama_2909	0.13	-2.8
3,458,896	+		Sama_2909	0.14	+0.3
3,458,896	+		Sama_2909	0.14	-2.0
3,458,977	+		Sama_2909	0.22	-0.2
3,459,000	+		Sama_2909	0.24	-0.2
3,459,001	-		Sama_2909	0.24	-1.3
3,459,112	+		Sama_2909	0.34	-2.8
3,459,112	+		Sama_2909	0.34	-0.4
3,459,112	+		Sama_2909	0.34	+1.4
3,459,113	-		Sama_2909	0.34	+1.8
3,459,175	+		Sama_2909	0.40	+3.1
3,459,175	+		Sama_2909	0.40	+0.6
3,459,176	-		Sama_2909	0.40	-2.2
3,459,245	+		Sama_2909	0.46	-0.6
3,459,245	+		Sama_2909	0.46	+0.9
3,459,246	-		Sama_2909	0.46	+0.5
3,459,248	+		Sama_2909	0.46	-2.6
3,459,248	+		Sama_2909	0.46	-3.2
3,459,249	-		Sama_2909	0.47	-0.5
3,459,262	+		Sama_2909	0.48	-2.1
3,459,263	-		Sama_2909	0.48	+0.3
3,459,263	-		Sama_2909	0.48	+0.5
3,459,263	-		Sama_2909	0.48	-1.9
3,459,271	+		Sama_2909	0.49	+0.5
3,459,271	+		Sama_2909	0.49	+2.4
3,459,305	+		Sama_2909	0.52	-1.3
3,459,311	+		Sama_2909	0.52	+1.5
3,459,312	-		Sama_2909	0.52	-0.5
3,459,312	-		Sama_2909	0.52	-3.1
3,459,366	-		Sama_2909	0.57	-0.6
3,459,398	-		Sama_2909	0.60	+1.7
3,459,398	-		Sama_2909	0.60	+1.5
3,459,520	-		Sama_2909	0.71	+2.4
3,459,520	-		Sama_2909	0.71	-0.3
3,459,520	-		Sama_2909	0.71	-1.1
3,459,623	+		Sama_2909	0.81	-1.0
3,459,623	+		Sama_2909	0.81	-0.2
3,459,624	-		Sama_2909	0.81	+0.0
3,459,624	-		Sama_2909	0.81	-2.2
3,459,624	-		Sama_2909	0.81	-1.6
3,459,690	+		Sama_2909	0.87	+1.4
3,459,690	+		Sama_2909	0.87	-2.8
3,459,690	+		Sama_2909	0.87	+1.0
3,459,690	+		Sama_2909	0.87	+0.4
3,459,690	+		Sama_2909	0.87	+1.2
3,459,690	+		Sama_2909	0.87	-1.1
3,459,690	+		Sama_2909	0.87	-1.1
3,459,690	+		Sama_2909	0.87	-0.6
3,459,690	+		Sama_2909	0.87	-1.0
3,459,690	+		Sama_2909	0.87	-0.6
3,459,690	+		Sama_2909	0.87	-0.4
3,459,690	+		Sama_2909	0.87	-0.5
3,459,691	-		Sama_2909	0.87	+2.0
3,459,691	-		Sama_2909	0.87	-1.3
3,459,691	-		Sama_2909	0.87	-1.9
3,459,691	-		Sama_2909	0.87	+0.1
3,459,691	-		Sama_2909	0.87	-1.3
3,459,691	-		Sama_2909	0.87	-0.4
3,459,691	-		Sama_2909	0.87	-0.6
3,459,691	-		Sama_2909	0.87	-0.2
3,459,691	-		Sama_2909	0.87	-2.8
3,459,691	-		Sama_2909	0.87	+0.1
3,459,691	-		Sama_2909	0.87	+1.6
3,459,691	-		Sama_2909	0.87	-2.6
3,459,694	+		Sama_2909	0.87	+2.0
3,459,694	+		Sama_2909	0.87	-0.3
3,459,695	-		Sama_2909	0.87	+1.0
3,459,695	-		Sama_2909	0.87	+2.2
3,459,695	-		Sama_2909	0.87	+2.0
3,459,722	+		Sama_2909	0.90	+1.8
3,459,759	+				-2.5
3,459,759	+				-1.3
3,459,759	+				+2.6
3,459,759	+				-2.7
3,459,759	+				-1.6
3,459,759	+				-0.1
3,459,759	+				-0.8
3,459,760	-				+3.3
3,459,760	-				+2.0
3,459,760	-				-2.1
3,459,760	-				+0.1
3,459,760	-				+1.1
3,459,760	-				+0.6
3,459,838	+				-0.6
3,459,839	-				+0.2
3,459,887	+				+1.3
3,459,887	+				+2.2
3,459,887	+				+0.4
3,459,887	+				-0.3
3,459,887	+				-1.0
3,459,887	+				+1.1
3,459,888	-				+1.7
3,459,888	-				-0.9
3,459,888	-				+5.9
3,459,888	-				+1.0
3,459,888	-				-2.4
3,459,889	+				-2.2
3,459,889	+				+1.4
3,459,889	+				+2.7
3,459,889	+				+0.7
3,459,889	+				-1.9
3,459,889	+				-0.2
3,459,890	-				+0.1
3,460,032	-		Sama_2910	0.13	-2.3
3,460,032	-		Sama_2910	0.13	+0.2
3,460,032	-		Sama_2910	0.13	+0.1
3,460,118	-		Sama_2910	0.19	-0.3
3,460,170	-		Sama_2910	0.22	+2.1
3,460,275	-		Sama_2910	0.30	+2.9
3,460,275	-		Sama_2910	0.30	+3.4
3,460,310	+		Sama_2910	0.32	-0.0
3,460,310	+		Sama_2910	0.32	+0.9
3,460,310	+		Sama_2910	0.32	-2.3
3,460,368	+		Sama_2910	0.36	-0.3
3,460,368	+		Sama_2910	0.36	+1.3
3,460,368	+		Sama_2910	0.36	+3.1
3,460,368	+		Sama_2910	0.36	+1.4
3,460,399	+		Sama_2910	0.38	-2.7
3,460,399	+		Sama_2910	0.38	-1.8
3,460,400	-		Sama_2910	0.38	-0.2
3,460,400	-		Sama_2910	0.38	+0.5
3,460,406	+		Sama_2910	0.38	-3.2
3,460,406	+		Sama_2910	0.38	+0.2
3,460,406	+		Sama_2910	0.38	-2.1
3,460,407	-		Sama_2910	0.38	+2.3
3,460,407	-		Sama_2910	0.38	-0.3
3,460,407	-		Sama_2910	0.38	-1.9
3,460,407	-		Sama_2910	0.38	-2.2
3,460,407	-		Sama_2910	0.38	+3.1
3,460,523	+		Sama_2910	0.46	+2.8
3,460,524	-		Sama_2910	0.46	+0.3
3,460,684	+		Sama_2910	0.57	+1.9
3,460,684	+		Sama_2910	0.57	+2.4
3,460,684	+		Sama_2910	0.57	-1.5
3,460,684	+		Sama_2910	0.57	-0.9
3,460,684	+		Sama_2910	0.57	-2.0
3,460,684	+		Sama_2910	0.57	+0.1
3,460,685	-		Sama_2910	0.57	-0.8
3,460,685	-		Sama_2910	0.57	+1.5
3,460,688	+		Sama_2910	0.57	-0.8
3,460,688	+		Sama_2910	0.57	-1.0
3,460,689	-		Sama_2910	0.57	-0.5
3,460,689	-		Sama_2910	0.57	+0.9
3,460,689	-		Sama_2910	0.57	-1.3
3,460,689	-		Sama_2910	0.57	+1.2
3,460,689	-		Sama_2910	0.57	-0.5
3,460,768	+		Sama_2910	0.63	-3.1
3,460,768	+		Sama_2910	0.63	+0.7
3,460,769	-		Sama_2910	0.63	+0.0
3,460,769	-		Sama_2910	0.63	+0.9
3,460,796	+		Sama_2910	0.65	+0.3
3,460,797	-		Sama_2910	0.65	-1.7
3,460,834	+		Sama_2910	0.67	+4.7
3,460,834	+		Sama_2910	0.67	-1.1
3,460,893	-		Sama_2910	0.71	-2.1
3,460,922	-		Sama_2910	0.73	-0.8
3,460,974	-		Sama_2910	0.77	-2.3
3,461,278	+				-0.7
3,461,278	+				+2.2
3,461,279	-				-2.4
3,461,279	-				+1.0
3,461,437	-		Sama_2911	0.35	-3.2
3,461,437	-		Sama_2911	0.35	+1.6
3,461,450	-		Sama_2911	0.38	-0.9
3,461,485	+		Sama_2911	0.48	+0.5
3,461,485	+		Sama_2911	0.48	-2.2
3,461,485	+		Sama_2911	0.48	-0.7
3,461,485	+		Sama_2911	0.48	+2.4
3,461,485	+		Sama_2911	0.48	-3.1
3,461,486	-		Sama_2911	0.49	-1.6
3,461,486	-		Sama_2911	0.49	-0.4
3,461,486	-		Sama_2911	0.49	-0.8
3,461,489	+		Sama_2911	0.50	-2.3
3,461,489	+		Sama_2911	0.50	+0.8
3,461,489	+		Sama_2911	0.50	+1.7
3,461,489	+		Sama_2911	0.50	+0.7
3,461,489	+		Sama_2911	0.50	+3.5
3,461,489	+		Sama_2911	0.50	-1.7
3,461,489	+		Sama_2911	0.50	+0.6
3,461,489	+		Sama_2911	0.50	-0.9
3,461,489	+		Sama_2911	0.50	+0.8
3,461,489	+		Sama_2911	0.50	+0.1
3,461,489	+		Sama_2911	0.50	-0.2
3,461,489	+		Sama_2911	0.50	-1.1
3,461,489	+		Sama_2911	0.50	+0.9
3,461,489	+		Sama_2911	0.50	+4.2
3,461,490	-		Sama_2911	0.50	-0.2
3,461,490	-		Sama_2911	0.50	-1.6
3,461,490	-		Sama_2911	0.50	+0.5
3,461,490	-		Sama_2911	0.50	-0.8
3,461,490	-		Sama_2911	0.50	+1.3
3,461,490	-		Sama_2911	0.50	-1.6
3,461,490	-		Sama_2911	0.50	-1.8
3,461,490	-		Sama_2911	0.50	+1.6
3,461,490	-		Sama_2911	0.50	-1.9
3,461,490	-		Sama_2911	0.50	-0.2
3,461,490	-		Sama_2911	0.50	-2.8
3,461,490	-		Sama_2911	0.50	-0.8
3,461,490	-		Sama_2911	0.50	-1.3
3,461,567	-		Sama_2911	0.72	+0.1
3,461,598	+		Sama_2911	0.81	-1.6
3,461,598	+		Sama_2911	0.81	+0.5
3,461,599	-		Sama_2911	0.81	-0.3
3,461,599	-		Sama_2911	0.81	-1.2
3,461,606	-		Sama_2911	0.83	-0.3
3,461,653	+				+0.7
3,461,653	+				-1.7
3,461,654	-				+4.0
3,461,654	-				-0.2
3,461,761	+				-1.8
3,461,761	+				-2.3
3,461,761	+				-0.9
3,461,762	-				+1.1
3,461,798	+				-0.2
3,461,798	+				-3.9
3,461,798	+				+4.7
3,461,798	+				+2.0
3,461,798	+				+1.9
3,461,799	-				+2.2
3,461,799	-				+0.5
3,461,799	-				-0.0
3,461,799	-				+1.4
3,461,799	-				-1.4
3,461,799	-				+1.4
3,461,799	-				-2.6
3,461,799	-				-0.8
3,461,799	-				-0.7
3,461,799	-				+1.7
3,461,799	-				+3.2
3,461,799	-				-1.3
3,461,800	+				+2.3
3,461,800	+				-1.0
3,461,800	+				+0.6
3,461,801	-				-4.1
3,461,862	+				-1.3
3,461,862	+				-0.6
3,461,862	+				-1.6
3,461,863	-				+2.9
3,461,971	-		Sama_2912	0.25	+3.6
3,461,976	+		Sama_2912	0.26	+1.6
3,461,982	+		Sama_2912	0.27	-1.1
3,461,983	-		Sama_2912	0.27	+0.2
3,462,007	+		Sama_2912	0.31	+3.1
3,462,007	+		Sama_2912	0.31	+0.0
3,462,008	-		Sama_2912	0.32	-2.8
3,462,008	-		Sama_2912	0.32	-0.9
3,462,008	-		Sama_2912	0.32	+1.3
3,462,033	+		Sama_2912	0.36	+3.1
3,462,033	+		Sama_2912	0.36	-0.1
3,462,034	-		Sama_2912	0.37	-0.3
3,462,034	-		Sama_2912	0.37	-0.5
3,462,034	-		Sama_2912	0.37	+0.0
3,462,185	+		Sama_2912	0.65	-0.5
3,462,185	+		Sama_2912	0.65	-0.6
3,462,185	+		Sama_2912	0.65	-1.5
3,462,186	-		Sama_2912	0.65	+0.3
3,462,186	-		Sama_2912	0.65	+2.4
3,462,186	-		Sama_2912	0.65	-2.3
3,462,186	-		Sama_2912	0.65	-3.2
3,462,186	-		Sama_2912	0.65	-2.4