Strain Fitness in Shewanella amazonensis SB2B around Sama_2761

Experiment: L-Histidine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Histidine (N)
3,302,373	+				+3.1
3,302,374	-				+2.6
3,302,441	-				+1.6
3,302,441	-				+0.4
3,302,441	-				-2.2
3,302,493	+				+0.1
3,302,493	+				-1.3
3,302,494	-				-1.4
3,302,494	-				+2.7
3,302,498	+				+4.7
3,302,499	-				-2.0
3,302,499	-				-1.2
3,302,499	-				+0.5
3,302,501	+				-1.8
3,302,501	+				+1.1
3,302,501	+				-1.1
3,302,501	+				-0.9
3,302,501	+				+2.7
3,302,501	+				-1.0
3,302,501	+				+0.4
3,302,502	-				-1.1
3,302,502	-				-2.0
3,302,502	-				-0.8
3,302,502	-				+4.4
3,302,502	-				+2.2
3,302,502	-				-0.7
3,302,533	+		Sama_2761	0.11	-0.4
3,302,533	+		Sama_2761	0.11	-0.4
3,302,533	+		Sama_2761	0.11	-1.0
3,302,534	-		Sama_2761	0.12	+1.0
3,302,534	-		Sama_2761	0.12	+2.9
3,302,572	+		Sama_2761	0.24	-0.9
3,302,573	-		Sama_2761	0.24	+5.6
3,302,634	+		Sama_2761	0.43	+0.1
3,302,634	+		Sama_2761	0.43	+1.3
3,302,634	+		Sama_2761	0.43	-1.2
3,302,635	-		Sama_2761	0.43	-0.3
3,302,635	-		Sama_2761	0.43	-2.4
3,302,651	+		Sama_2761	0.48	+2.4
3,302,651	+		Sama_2761	0.48	-0.2
3,302,651	+		Sama_2761	0.48	-0.4
3,302,651	+		Sama_2761	0.48	+0.5
3,302,652	-		Sama_2761	0.49	+3.1
3,302,652	-		Sama_2761	0.49	-0.7
3,302,652	-		Sama_2761	0.49	+4.0
3,302,675	+		Sama_2761	0.56	+0.9
3,302,675	+		Sama_2761	0.56	+3.8
3,302,676	-		Sama_2761	0.56	+2.9
3,302,676	-		Sama_2761	0.56	+0.4
3,302,706	+		Sama_2761	0.66	-1.0
3,302,725	+		Sama_2761	0.72	-0.7
3,302,725	+		Sama_2761	0.72	-2.3
3,302,725	+		Sama_2761	0.72	-0.5
3,302,725	+		Sama_2761	0.72	-1.6
3,302,726	-		Sama_2761	0.72	-1.2
3,302,726	-		Sama_2761	0.72	+1.5
3,302,726	-		Sama_2761	0.72	-1.9
3,302,726	-		Sama_2761	0.72	+0.2
3,302,726	-		Sama_2761	0.72	-1.0
3,302,738	+		Sama_2761	0.76	-0.2
3,302,738	+		Sama_2761	0.76	-2.2
3,302,738	+		Sama_2761	0.76	+2.7
3,302,750	-		Sama_2761	0.80	-1.5
3,302,750	-		Sama_2761	0.80	+0.4
3,302,783	+				+0.6
3,302,783	+				-0.2
3,302,791	+				+4.5
3,302,791	+				+0.4
3,302,792	-				-0.1
3,302,805	+				-0.4
3,302,805	+				-0.8
3,302,806	-				+2.1
3,302,806	-				-2.1
3,302,806	-				-0.6
3,302,807	+				-0.7
3,302,807	+				-0.4
3,302,807	+				+2.1
3,302,807	+				+2.7
3,302,808	-				-2.8
3,302,808	-				-1.4
3,302,808	-				-1.0
3,302,808	-				+1.1
3,302,808	-				+0.6
3,302,808	-				-0.8
3,302,808	-				-1.4
3,302,808	-				-1.0
3,302,808	-				-1.3
3,302,808	-				-0.1
3,302,808	-				-2.0
3,302,814	+				+0.1
3,302,814	+				+0.2
3,302,814	+				+0.2
3,302,814	+				+2.2
3,302,814	+				-1.8
3,302,815	-				+2.3
3,302,815	-				-1.4
3,302,815	-				+1.3
3,302,815	-				-3.2
3,302,815	-				+0.2
3,302,815	-				-0.9
3,302,847	-				+1.8
3,302,860	+				-0.7
3,302,868	+				-2.3
3,302,868	+				-1.0
3,302,868	+				-1.1
3,302,869	-				-1.6
3,302,869	-				+0.5
3,302,869	-				-1.9
3,302,869	-				+2.1
3,302,904	+				-0.9
3,302,904	+				-1.4
3,302,904	+				+0.8
3,302,904	+				-1.8
3,302,904	+				-0.5
3,302,905	-				-0.5
3,302,905	-				-2.0
3,302,905	-				-0.7
3,302,905	-				+2.0
3,302,905	-				-0.2
3,302,905	-				+0.8
3,302,922	+				-0.8
3,302,923	-				-2.4
3,303,067	+		Sama_2762	0.12	+0.9
3,303,097	+		Sama_2762	0.14	-0.8
3,303,098	-		Sama_2762	0.14	+0.0
3,303,098	-		Sama_2762	0.14	+1.5
3,303,098	-		Sama_2762	0.14	+0.8
3,303,193	+		Sama_2762	0.18	+0.7
3,303,214	+		Sama_2762	0.19	-1.8
3,303,214	+		Sama_2762	0.19	-0.0
3,303,215	-		Sama_2762	0.19	+3.1
3,303,215	-		Sama_2762	0.19	+1.3
3,303,215	-		Sama_2762	0.19	-0.5
3,303,215	-		Sama_2762	0.19	-1.4
3,303,215	-		Sama_2762	0.19	+0.5
3,303,215	-		Sama_2762	0.19	+1.1
3,303,215	-		Sama_2762	0.19	+1.5
3,303,215	-		Sama_2762	0.19	+0.7
3,303,215	-		Sama_2762	0.19	-1.8
3,303,289	+		Sama_2762	0.23	-2.1
3,303,289	+		Sama_2762	0.23	-0.8
3,303,289	+		Sama_2762	0.23	-1.4
3,303,289	+		Sama_2762	0.23	+1.0
3,303,290	-		Sama_2762	0.23	+4.7
3,303,290	-		Sama_2762	0.23	+0.1
3,303,290	-		Sama_2762	0.23	+2.2
3,303,290	-		Sama_2762	0.23	-0.4
3,303,290	-		Sama_2762	0.23	+0.1
3,303,290	-		Sama_2762	0.23	-1.7
3,303,290	-		Sama_2762	0.23	+0.5
3,303,303	-		Sama_2762	0.24	-0.4
3,303,325	+		Sama_2762	0.25	+1.4
3,303,325	+		Sama_2762	0.25	+0.7
3,303,382	+		Sama_2762	0.28	+2.1
3,303,383	-		Sama_2762	0.28	+1.5
3,303,383	-		Sama_2762	0.28	-0.4
3,303,383	-		Sama_2762	0.28	-1.4
3,303,383	-		Sama_2762	0.28	-0.2
3,303,383	-		Sama_2762	0.28	-0.1
3,303,386	-		Sama_2762	0.28	+1.8
3,303,386	-		Sama_2762	0.28	-0.4
3,303,386	-		Sama_2762	0.28	-1.7
3,303,386	-		Sama_2762	0.28	-3.1
3,303,402	-		Sama_2762	0.29	-0.1
3,303,402	-		Sama_2762	0.29	-2.8
3,303,440	-		Sama_2762	0.30	+1.5
3,303,455	+		Sama_2762	0.31	-0.4
3,303,455	+		Sama_2762	0.31	+0.2
3,303,455	+		Sama_2762	0.31	-0.8
3,303,456	-		Sama_2762	0.31	+1.0
3,303,456	-		Sama_2762	0.31	-0.9
3,303,458	-		Sama_2762	0.31	+1.4
3,303,563	+		Sama_2762	0.37	-2.1
3,303,563	+		Sama_2762	0.37	+1.0
3,303,564	-		Sama_2762	0.37	+0.1
3,303,564	-		Sama_2762	0.37	+1.7
3,303,564	-		Sama_2762	0.37	+0.2
3,303,578	-		Sama_2762	0.37	+1.1
3,303,643	+		Sama_2762	0.40	-0.8
3,303,652	+		Sama_2762	0.41	+3.2
3,303,652	+		Sama_2762	0.41	-2.2
3,303,694	-		Sama_2762	0.43	-1.6
3,303,720	+		Sama_2762	0.44	-2.3
3,303,720	+		Sama_2762	0.44	-1.1
3,303,720	+		Sama_2762	0.44	-1.0
3,303,721	-		Sama_2762	0.44	+0.1
3,303,721	-		Sama_2762	0.44	-3.1
3,303,721	-		Sama_2762	0.44	+2.0
3,303,721	-		Sama_2762	0.44	-2.7
3,303,721	-		Sama_2762	0.44	-1.8
3,303,721	-		Sama_2762	0.44	-2.0
3,303,724	+		Sama_2762	0.44	+0.4
3,303,724	+		Sama_2762	0.44	+0.2
3,303,731	-		Sama_2762	0.45	+0.6
3,303,745	+		Sama_2762	0.45	+0.6
3,303,745	+		Sama_2762	0.45	-1.0
3,303,745	+		Sama_2762	0.45	+0.1
3,303,745	+		Sama_2762	0.45	-1.3
3,303,745	+		Sama_2762	0.45	-0.7
3,303,746	-		Sama_2762	0.46	-0.4
3,303,746	-		Sama_2762	0.46	+0.2
3,303,750	-		Sama_2762	0.46	-0.9
3,303,762	-		Sama_2762	0.46	+1.5
3,303,791	-		Sama_2762	0.48	+2.0
3,303,791	-		Sama_2762	0.48	+0.3