Strain Fitness in Shewanella amazonensis SB2B around Sama_2637

Experiment: L-Histidine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Histidine (N)
3,158,311	+		Sama_2636	0.30	-0.8
3,158,312	-		Sama_2636	0.30	+0.7
3,158,412	-		Sama_2636	0.38	-2.0
3,158,412	-		Sama_2636	0.38	+2.2
3,158,412	-		Sama_2636	0.38	-2.3
3,158,414	+		Sama_2636	0.38	-0.9
3,158,415	-		Sama_2636	0.38	+0.6
3,158,417	+		Sama_2636	0.38	-2.5
3,158,417	+		Sama_2636	0.38	-4.1
3,158,418	-		Sama_2636	0.38	-2.7
3,158,418	-		Sama_2636	0.38	-1.5
3,158,541	-		Sama_2636	0.48	-2.8
3,158,561	-		Sama_2636	0.49	-2.4
3,158,735	+		Sama_2636	0.63	-1.0
3,158,735	+		Sama_2636	0.63	-1.5
3,158,735	+		Sama_2636	0.63	+0.1
3,158,735	+		Sama_2636	0.63	-0.9
3,158,741	-		Sama_2636	0.64	+1.3
3,158,741	-		Sama_2636	0.64	-1.0
3,158,741	-		Sama_2636	0.64	-1.6
3,158,791	+		Sama_2636	0.67	-0.9
3,158,801	+		Sama_2636	0.68	-2.8
3,158,802	-		Sama_2636	0.68	+0.3
3,158,846	+		Sama_2636	0.72	-2.2
3,158,846	+		Sama_2636	0.72	-0.5
3,158,880	-		Sama_2636	0.74	-0.3
3,158,947	+		Sama_2636	0.80	-0.8
3,158,947	+		Sama_2636	0.80	-0.0
3,158,947	+		Sama_2636	0.80	+4.1
3,158,947	+		Sama_2636	0.80	+0.9
3,158,948	-		Sama_2636	0.80	+1.4
3,158,956	+		Sama_2636	0.80	+2.5
3,158,956	+		Sama_2636	0.80	-0.5
3,158,957	-		Sama_2636	0.80	+0.1
3,158,969	+		Sama_2636	0.81	-0.9
3,158,969	+		Sama_2636	0.81	-1.9
3,158,969	+		Sama_2636	0.81	-0.4
3,158,970	-		Sama_2636	0.81	-1.5
3,158,970	-		Sama_2636	0.81	+1.1
3,158,970	-		Sama_2636	0.81	-1.7
3,158,970	-		Sama_2636	0.81	-1.3
3,158,970	-		Sama_2636	0.81	-0.1
3,159,018	+		Sama_2636	0.85	-0.5
3,159,019	-		Sama_2636	0.85	+0.1
3,159,019	-		Sama_2636	0.85	-1.5
3,159,074	+		Sama_2636	0.90	-2.4
3,159,074	+		Sama_2636	0.90	+3.6
3,159,076	+		Sama_2636	0.90	+6.1
3,159,076	+		Sama_2636	0.90	+2.0
3,159,077	-		Sama_2636	0.90	-1.9
3,159,077	-		Sama_2636	0.90	-0.4
3,159,077	-		Sama_2636	0.90	-2.5
3,159,077	-		Sama_2636	0.90	+0.7
3,159,099	+				-1.5
3,159,131	+				-0.8
3,159,206	+				-1.0
3,159,207	-				+3.0
3,159,207	-				-2.4
3,159,207	-				-1.1
3,159,207	-				-1.9
3,159,211	+				-0.9
3,159,211	+				-1.9
3,159,212	-				+1.5
3,159,212	-				-1.2
3,159,212	-				-0.9
3,159,245	+				-2.6
3,159,245	+				-2.0
3,159,245	+				-3.2
3,159,245	+				-1.7
3,159,245	+				-1.2
3,159,245	+				-2.3
3,159,246	-				-2.0
3,159,246	-				-0.7
3,159,246	-				-2.8
3,159,246	-				-2.5
3,159,246	-				-0.2
3,159,246	-				-1.4
3,159,246	-				-1.5
3,159,246	-				-0.9
3,159,246	-				-1.7
3,159,246	-				-2.5
3,159,246	-				-2.1
3,159,246	-				-2.9
3,159,246	-				-2.9
3,159,246	-				-1.4
3,159,246	-				-2.0
3,159,247	+				-2.3
3,159,247	+				-4.8
3,159,247	+				+1.2
3,159,247	+				-1.5
3,159,247	+				-1.1
3,159,247	+				-0.2
3,159,247	+				-1.7
3,159,248	-				-2.2
3,159,248	-				-1.1
3,159,248	-				-1.0
3,159,248	-				-0.0
3,159,248	-				-1.1
3,159,248	-				-0.9
3,159,248	-				-2.0
3,159,248	-				-1.7
3,159,258	+				-1.5
3,159,259	-				-3.5
3,159,262	+				-3.9
3,159,262	+				-0.9
3,159,262	+				-3.6
3,159,263	-				-0.2
3,159,263	-				-2.1
3,159,263	-				-1.1
3,159,263	-				-1.4
3,159,277	+				-2.6
3,159,277	+				-2.0
3,159,277	+				-1.7
3,159,277	+				-1.2
3,159,277	+				-3.5
3,159,278	-				-2.6
3,159,278	-				-2.8
3,159,278	-				-2.5
3,159,278	-				-2.0
3,159,278	-				-2.5
3,159,278	-				-2.5
3,159,278	-				-1.1
3,159,344	+				-2.0
3,159,344	+				-3.5
3,159,345	-				-2.6
3,159,345	-				-2.4
3,159,354	-				-0.0
3,159,374	-		Sama_2637	0.10	-0.2
3,159,401	+		Sama_2637	0.12	-2.7
3,159,421	+		Sama_2637	0.13	-0.7
3,159,421	+		Sama_2637	0.13	-0.7
3,159,421	+		Sama_2637	0.13	-1.8
3,159,421	+		Sama_2637	0.13	-1.6
3,159,422	-		Sama_2637	0.13	-2.8
3,159,422	-		Sama_2637	0.13	-1.7
3,159,427	+		Sama_2637	0.14	+0.4
3,159,427	+		Sama_2637	0.14	-3.2
3,159,428	-		Sama_2637	0.14	-1.7
3,159,651	+		Sama_2637	0.29	-2.5
3,159,652	-		Sama_2637	0.29	-4.8
3,159,677	+		Sama_2637	0.31	-1.8
3,159,722	+		Sama_2637	0.34	-2.2
3,159,723	-		Sama_2637	0.34	-3.5
3,159,723	-		Sama_2637	0.34	-2.6
3,159,766	+		Sama_2637	0.37	-2.0
3,159,766	+		Sama_2637	0.37	-2.1
3,159,766	+		Sama_2637	0.37	-1.4
3,159,766	+		Sama_2637	0.37	-2.0
3,159,766	+		Sama_2637	0.37	+1.1
3,159,767	-		Sama_2637	0.37	-0.7
3,159,767	-		Sama_2637	0.37	-1.3
3,159,767	-		Sama_2637	0.37	-2.4
3,159,767	-		Sama_2637	0.37	-3.6
3,159,767	-		Sama_2637	0.37	-1.9
3,159,767	-		Sama_2637	0.37	-2.8
3,159,767	-		Sama_2637	0.37	-1.5
3,159,767	-		Sama_2637	0.37	-3.1
3,159,784	+		Sama_2637	0.39	-3.6
3,159,784	+		Sama_2637	0.39	-1.6
3,159,784	+		Sama_2637	0.39	-1.9
3,159,784	+		Sama_2637	0.39	-1.5
3,159,785	-		Sama_2637	0.39	+1.0
3,159,785	-		Sama_2637	0.39	-1.0
3,159,785	-		Sama_2637	0.39	-2.3
3,159,785	-		Sama_2637	0.39	-2.3
3,159,785	-		Sama_2637	0.39	-0.2
3,159,785	-		Sama_2637	0.39	-2.6
3,159,785	-		Sama_2637	0.39	-3.5
3,159,956	+		Sama_2637	0.50	-2.7
3,159,956	+		Sama_2637	0.50	-3.4
3,159,957	-		Sama_2637	0.51	+0.5
3,159,957	-		Sama_2637	0.51	-2.7
3,160,056	+		Sama_2637	0.57	-2.3
3,160,057	-		Sama_2637	0.57	-1.7
3,160,138	-		Sama_2637	0.63	-2.9
3,160,138	-		Sama_2637	0.63	-1.9
3,160,138	-		Sama_2637	0.63	-0.9
3,160,225	-		Sama_2637	0.69	-3.3
3,160,241	+		Sama_2637	0.70	-2.0
3,160,241	+		Sama_2637	0.70	-0.5
3,160,242	-		Sama_2637	0.70	-0.7
3,160,291	+		Sama_2637	0.74	+0.2
3,160,291	+		Sama_2637	0.74	-1.0
3,160,291	+		Sama_2637	0.74	-0.9
3,160,291	+		Sama_2637	0.74	-1.4
3,160,293	+		Sama_2637	0.74	-3.2
3,160,293	+		Sama_2637	0.74	-1.8
3,160,293	+		Sama_2637	0.74	-2.1
3,160,293	+		Sama_2637	0.74	-0.9
3,160,293	+		Sama_2637	0.74	-0.9
3,160,294	-		Sama_2637	0.74	-1.1
3,160,294	-		Sama_2637	0.74	-0.8
3,160,294	-		Sama_2637	0.74	-1.5
3,160,294	-		Sama_2637	0.74	-1.7
3,160,294	-		Sama_2637	0.74	-2.5
3,160,294	-		Sama_2637	0.74	-2.9
3,160,294	-		Sama_2637	0.74	-3.6
3,160,339	+		Sama_2637	0.77	-0.2
3,160,339	+		Sama_2637	0.77	-2.1
3,160,339	+		Sama_2637	0.77	-1.2
3,160,340	-		Sama_2637	0.77	-1.7
3,160,469	+		Sama_2637	0.86	-0.2
3,160,628	+				-2.3
3,160,628	+				-2.1
3,160,685	+				+1.2
3,160,685	+				-0.3
3,160,685	+				-2.7
3,160,686	-				-0.6
3,160,686	-				+1.3
3,160,686	-				+0.1
3,160,710	+				-1.9
3,160,710	+				-1.9
3,160,754	+				-0.8
3,160,754	+				+0.6
3,160,755	-				+2.6
3,160,755	-				+1.0
3,160,755	-				+0.4
3,160,755	-				+0.7
3,160,758	-				+2.0
3,160,758	-				+1.9
3,160,758	-				-0.6
3,160,758	-				-1.2
3,160,860	+		Sama_2638	0.10	-0.2
3,160,861	-		Sama_2638	0.10	-0.0
3,160,898	+		Sama_2638	0.13	-0.8
3,160,898	+		Sama_2638	0.13	-0.2
3,160,898	+		Sama_2638	0.13	-1.4
3,160,898	+		Sama_2638	0.13	+1.8
3,160,899	-		Sama_2638	0.13	+2.8
3,160,899	-		Sama_2638	0.13	+0.7
3,160,899	-		Sama_2638	0.13	+1.0
3,160,899	-		Sama_2638	0.13	+2.1
3,160,903	+		Sama_2638	0.14	+0.8
3,160,903	+		Sama_2638	0.14	-2.3
3,160,903	+		Sama_2638	0.14	-0.2
3,160,903	+		Sama_2638	0.14	-1.5
3,160,903	+		Sama_2638	0.14	-0.5
3,160,904	-		Sama_2638	0.14	+0.6
3,160,904	-		Sama_2638	0.14	+1.2
3,160,932	-		Sama_2638	0.16	+2.4
3,160,934	+		Sama_2638	0.16	+2.5
3,160,934	+		Sama_2638	0.16	-0.6
3,160,934	+		Sama_2638	0.16	+0.8
3,160,934	+		Sama_2638	0.16	+0.8
3,160,934	+		Sama_2638	0.16	-1.2
3,160,934	+		Sama_2638	0.16	-1.4
3,160,934	+		Sama_2638	0.16	+1.7
3,160,934	+		Sama_2638	0.16	-0.8
3,160,934	+		Sama_2638	0.16	-1.1
3,160,934	+		Sama_2638	0.16	-0.7
3,160,934	+		Sama_2638	0.16	+2.3
3,160,934	+		Sama_2638	0.16	+1.6
3,160,934	+		Sama_2638	0.16	+0.1
3,160,934	+		Sama_2638	0.16	-0.1
3,160,935	-		Sama_2638	0.16	-1.2
3,160,935	-		Sama_2638	0.16	+3.1
3,160,935	-		Sama_2638	0.16	+2.2
3,160,935	-		Sama_2638	0.16	+1.2
3,160,935	-		Sama_2638	0.16	+1.2
3,160,935	-		Sama_2638	0.16	+0.7
3,160,935	-		Sama_2638	0.16	-1.0
3,160,935	-		Sama_2638	0.16	-0.4
3,160,935	-		Sama_2638	0.16	-0.5
3,160,935	-		Sama_2638	0.16	+2.4
3,160,935	-		Sama_2638	0.16	+0.5
3,160,950	+		Sama_2638	0.17	+0.9
3,160,993	-		Sama_2638	0.21	-0.5
3,161,007	-		Sama_2638	0.22	+1.0
3,161,007	-		Sama_2638	0.22	-1.0
3,161,007	-		Sama_2638	0.22	+0.7
3,161,007	-		Sama_2638	0.22	-0.6
3,161,013	+		Sama_2638	0.22	-1.2
3,161,025	+		Sama_2638	0.23	+1.4
3,161,025	+		Sama_2638	0.23	+0.5
3,161,096	+		Sama_2638	0.29	-2.1
3,161,096	+		Sama_2638	0.29	+0.6
3,161,096	+		Sama_2638	0.29	+1.2
3,161,097	-		Sama_2638	0.29	-3.1
3,161,097	-		Sama_2638	0.29	-0.5
3,161,097	-		Sama_2638	0.29	-2.0
3,161,097	-		Sama_2638	0.29	-0.5
3,161,147	+		Sama_2638	0.33	-1.3
3,161,159	+		Sama_2638	0.34	-0.8
3,161,159	+		Sama_2638	0.34	+2.1
3,161,160	-		Sama_2638	0.34	+1.9
3,161,160	-		Sama_2638	0.34	-1.3
3,161,160	-		Sama_2638	0.34	-1.5
3,161,163	+		Sama_2638	0.34	+0.2
3,161,164	-		Sama_2638	0.34	-1.6
3,161,164	-		Sama_2638	0.34	+1.0
3,161,164	-		Sama_2638	0.34	-0.0
3,161,164	-		Sama_2638	0.34	-1.6
3,161,164	-		Sama_2638	0.34	-0.6
3,161,164	-		Sama_2638	0.34	-0.8
3,161,180	+		Sama_2638	0.35	-2.1
3,161,181	-		Sama_2638	0.35	+0.9
3,161,181	-		Sama_2638	0.35	-0.0
3,161,181	-		Sama_2638	0.35	+0.0
3,161,199	+		Sama_2638	0.37	-0.0
3,161,199	+		Sama_2638	0.37	+0.4
3,161,200	-		Sama_2638	0.37	+0.8
3,161,200	-		Sama_2638	0.37	+0.1
3,161,200	-		Sama_2638	0.37	-2.0
3,161,232	+		Sama_2638	0.39	-2.6
3,161,233	-		Sama_2638	0.39	+1.4
3,161,294	+		Sama_2638	0.44	-2.8
3,161,294	+		Sama_2638	0.44	-0.9
3,161,295	-		Sama_2638	0.44	+1.3
3,161,295	-		Sama_2638	0.44	+0.5
3,161,295	-		Sama_2638	0.44	+1.5
3,161,355	+		Sama_2638	0.49	-0.4
3,161,355	+		Sama_2638	0.49	-1.8
3,161,356	-		Sama_2638	0.49	+2.0
3,161,356	-		Sama_2638	0.49	+0.0
3,161,374	+		Sama_2638	0.50	+0.5
3,161,375	-		Sama_2638	0.50	+1.0
3,161,375	-		Sama_2638	0.50	+0.8
3,161,488	-		Sama_2638	0.59	-1.8
3,161,509	-		Sama_2638	0.61	+1.1
3,161,521	-		Sama_2638	0.62	+0.9
3,161,559	+		Sama_2638	0.65	-0.5
3,161,560	-		Sama_2638	0.65	+0.2
3,161,560	-		Sama_2638	0.65	+3.0
3,161,661	+		Sama_2638	0.73	-0.9
3,161,665	-		Sama_2638	0.73	+1.8
3,161,665	-		Sama_2638	0.73	+1.2
3,161,666	+		Sama_2638	0.73	-1.6
3,161,666	+		Sama_2638	0.73	+0.3
3,161,667	-		Sama_2638	0.73	+2.4
3,161,667	-		Sama_2638	0.73	+3.3
3,161,667	-		Sama_2638	0.73	+0.1
3,161,667	-		Sama_2638	0.73	+2.1
3,161,667	-		Sama_2638	0.73	+2.6
3,161,667	-		Sama_2638	0.73	-1.5