Strain Fitness in Shewanella amazonensis SB2B around Sama_2525

Experiment: L-Histidine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Histidine (N)
3,033,505	+		Sama_2524	0.36	-2.3
3,033,689	+		Sama_2524	0.49	-2.6
3,033,689	+		Sama_2524	0.49	-1.1
3,033,690	-		Sama_2524	0.49	-2.1
3,033,802	+		Sama_2524	0.57	-0.4
3,033,802	+		Sama_2524	0.57	+2.0
3,033,810	+		Sama_2524	0.57	+3.3
3,033,810	+		Sama_2524	0.57	+2.6
3,033,811	-		Sama_2524	0.57	-1.6
3,033,852	+		Sama_2524	0.60	+1.7
3,033,904	+		Sama_2524	0.64	+1.7
3,033,905	-		Sama_2524	0.64	+2.6
3,033,905	-		Sama_2524	0.64	+1.0
3,033,971	-		Sama_2524	0.68	+0.1
3,034,015	+		Sama_2524	0.72	+2.1
3,034,016	-		Sama_2524	0.72	+2.7
3,034,044	+		Sama_2524	0.74	-1.2
3,034,045	-		Sama_2524	0.74	-0.9
3,034,088	-		Sama_2524	0.77	-0.0
3,034,119	+		Sama_2524	0.79	+3.0
3,034,119	+		Sama_2524	0.79	-1.1
3,034,120	-		Sama_2524	0.79	+0.0
3,034,120	-		Sama_2524	0.79	+1.2
3,034,120	-		Sama_2524	0.79	-1.1
3,034,123	+		Sama_2524	0.79	+3.4
3,034,123	+		Sama_2524	0.79	+1.2
3,034,123	+		Sama_2524	0.79	-0.6
3,034,123	+		Sama_2524	0.79	-3.4
3,034,123	+		Sama_2524	0.79	+1.6
3,034,124	-		Sama_2524	0.79	+0.8
3,034,124	-		Sama_2524	0.79	-0.4
3,034,124	-		Sama_2524	0.79	+1.1
3,034,124	-		Sama_2524	0.79	-2.3
3,034,124	-		Sama_2524	0.79	+0.6
3,034,124	-		Sama_2524	0.79	+3.7
3,034,124	-		Sama_2524	0.79	-0.3
3,034,208	+		Sama_2524	0.85	-0.5
3,034,209	-		Sama_2524	0.85	+0.8
3,034,440	-				+0.9
3,034,454	-				-0.4
3,034,473	+				-2.4
3,034,474	-				+1.8
3,034,474	-				-0.7
3,034,474	-				+1.8
3,034,485	+				-1.6
3,034,485	+				-0.0
3,034,492	+				+1.0
3,034,493	-				-0.3
3,034,493	-				+1.9
3,034,505	+				-0.9
3,034,506	-				+0.1
3,034,513	-				-2.1
3,034,593	+		Sama_2525	0.22	-1.1
3,034,593	+		Sama_2525	0.22	-1.0
3,034,593	+		Sama_2525	0.22	+1.4
3,034,594	-		Sama_2525	0.23	-0.4
3,034,636	+		Sama_2525	0.33	+1.0
3,034,734	+		Sama_2525	0.56	-0.4
3,034,735	-		Sama_2525	0.56	-3.1
3,034,744	+		Sama_2525	0.59	-0.7
3,034,745	-		Sama_2525	0.59	-1.5
3,034,750	+		Sama_2525	0.60	-0.8
3,034,751	-		Sama_2525	0.60	-1.6
3,034,781	+		Sama_2525	0.67	+1.1
3,034,781	+		Sama_2525	0.67	+1.6
3,034,782	-		Sama_2525	0.68	-3.1
3,034,783	+		Sama_2525	0.68	-0.4
3,034,783	+		Sama_2525	0.68	-0.5
3,034,783	+		Sama_2525	0.68	-2.7
3,034,783	+		Sama_2525	0.68	+0.1
3,034,783	+		Sama_2525	0.68	-0.6
3,034,784	-		Sama_2525	0.68	+1.7
3,034,849	+		Sama_2525	0.84	-2.6
3,034,872	+		Sama_2525	0.89	-0.9
3,034,909	+				+0.4
3,034,909	+				+0.5
3,034,909	+				-1.6
3,034,909	+				+2.7
3,034,910	-				+0.5
3,034,927	+				+0.6
3,034,927	+				-3.3
3,034,949	+				+0.3
3,034,950	-				-0.1
3,034,950	-				-0.4
3,034,954	+				-2.4
3,034,954	+				+1.6
3,034,954	+				+2.2
3,034,955	-				-0.6
3,034,955	-				-2.0
3,034,957	+				+1.3
3,034,958	-				-2.5
3,034,958	-				+0.5
3,034,958	-				-2.4
3,035,080	+				-1.3
3,035,081	-				+0.2
3,035,172	+		Sama_2526	0.18	+0.3
3,035,172	+		Sama_2526	0.18	-1.0
3,035,173	-		Sama_2526	0.18	+3.7
3,035,180	+		Sama_2526	0.18	+0.3
3,035,182	+		Sama_2526	0.19	+0.6
3,035,182	+		Sama_2526	0.19	+0.1
3,035,182	+		Sama_2526	0.19	-0.2
3,035,182	+		Sama_2526	0.19	+0.6
3,035,182	+		Sama_2526	0.19	+0.1
3,035,182	+		Sama_2526	0.19	-1.5
3,035,182	+		Sama_2526	0.19	-0.4
3,035,183	-		Sama_2526	0.19	-0.4
3,035,183	-		Sama_2526	0.19	+2.7
3,035,183	-		Sama_2526	0.19	-1.9
3,035,211	+		Sama_2526	0.21	-0.8
3,035,212	-		Sama_2526	0.22	+0.8
3,035,212	-		Sama_2526	0.22	+0.6
3,035,212	-		Sama_2526	0.22	-1.3
3,035,212	-		Sama_2526	0.22	+0.1
3,035,212	-		Sama_2526	0.22	+0.6
3,035,222	+		Sama_2526	0.23	+0.8
3,035,239	+		Sama_2526	0.24	+0.6
3,035,239	+		Sama_2526	0.24	-2.9
3,035,353	+		Sama_2526	0.36	+2.6
3,035,353	+		Sama_2526	0.36	-0.9
3,035,434	+		Sama_2526	0.44	+2.4
3,035,435	-		Sama_2526	0.44	+0.2
3,035,435	-		Sama_2526	0.44	+0.8
3,035,452	-		Sama_2526	0.46	+1.3
3,035,471	+		Sama_2526	0.47	+0.9
3,035,472	-		Sama_2526	0.48	-0.5
3,035,479	+		Sama_2526	0.48	+0.5
3,035,479	+		Sama_2526	0.48	+1.8
3,035,479	+		Sama_2526	0.48	-0.4
3,035,479	+		Sama_2526	0.48	+1.9
3,035,479	+		Sama_2526	0.48	-1.9
3,035,479	+		Sama_2526	0.48	+2.5
3,035,480	-		Sama_2526	0.48	-0.5
3,035,480	-		Sama_2526	0.48	-0.2
3,035,480	-		Sama_2526	0.48	+1.6
3,035,480	-		Sama_2526	0.48	-0.7
3,035,480	-		Sama_2526	0.48	-1.5
3,035,480	-		Sama_2526	0.48	-0.5
3,035,480	-		Sama_2526	0.48	+1.9
3,035,496	+		Sama_2526	0.50	-0.5
3,035,506	+		Sama_2526	0.51	+1.2
3,035,506	+		Sama_2526	0.51	-0.0
3,035,507	-		Sama_2526	0.51	+0.1
3,035,507	-		Sama_2526	0.51	+0.0
3,035,507	-		Sama_2526	0.51	-0.2
3,035,576	+		Sama_2526	0.58	+1.7
3,035,576	+		Sama_2526	0.58	-0.0
3,035,576	+		Sama_2526	0.58	-1.2
3,035,576	+		Sama_2526	0.58	+4.4
3,035,577	-		Sama_2526	0.58	+2.8
3,035,577	-		Sama_2526	0.58	-0.7
3,035,577	-		Sama_2526	0.58	+2.0
3,035,577	-		Sama_2526	0.58	-2.3
3,035,577	-		Sama_2526	0.58	-0.5
3,035,577	-		Sama_2526	0.58	-1.2
3,035,601	-		Sama_2526	0.60	-1.5
3,035,601	-		Sama_2526	0.60	-0.1
3,035,601	-		Sama_2526	0.60	-1.5
3,035,645	+		Sama_2526	0.65	-1.5
3,035,645	+		Sama_2526	0.65	+0.3
3,035,646	-		Sama_2526	0.65	-2.8
3,035,646	-		Sama_2526	0.65	-0.4
3,035,652	+		Sama_2526	0.65	+0.6
3,035,653	-		Sama_2526	0.66	+4.1
3,035,653	-		Sama_2526	0.66	+0.4
3,035,653	-		Sama_2526	0.66	+0.8
3,035,653	-		Sama_2526	0.66	-0.9
3,035,697	+		Sama_2526	0.70	+0.8
3,035,697	+		Sama_2526	0.70	+0.0
3,035,697	+		Sama_2526	0.70	+1.0
3,035,698	-		Sama_2526	0.70	+2.4
3,035,698	-		Sama_2526	0.70	+3.1
3,035,698	-		Sama_2526	0.70	-0.8
3,035,705	+		Sama_2526	0.71	+2.7
3,035,706	-		Sama_2526	0.71	-2.1
3,035,807	+		Sama_2526	0.81	+1.4
3,035,807	+		Sama_2526	0.81	+1.5
3,035,807	+		Sama_2526	0.81	-0.5
3,035,808	-		Sama_2526	0.81	+0.5