Strain Fitness in Shewanella amazonensis SB2B around Sama_2517

Experiment: L-Histidine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Histidine (N)
3,022,161	+		Sama_2516	0.35	-3.4
3,022,162	-		Sama_2516	0.35	-1.0
3,022,248	+		Sama_2516	0.43	-3.8
3,022,248	+		Sama_2516	0.43	-1.8
3,022,249	-		Sama_2516	0.43	-0.8
3,022,367	-		Sama_2516	0.53	-1.7
3,022,367	-		Sama_2516	0.53	-1.8
3,022,451	-		Sama_2516	0.61	-0.8
3,022,451	-		Sama_2516	0.61	-1.6
3,022,456	-		Sama_2516	0.61	-1.2
3,022,547	+		Sama_2516	0.69	-2.8
3,022,607	+		Sama_2516	0.74	-1.7
3,022,607	+		Sama_2516	0.74	-1.3
3,022,608	-		Sama_2516	0.74	-2.5
3,022,611	+		Sama_2516	0.75	-0.2
3,022,612	-		Sama_2516	0.75	-2.1
3,022,612	-		Sama_2516	0.75	-2.4
3,022,751	-		Sama_2516	0.87	-2.1
3,022,751	-		Sama_2516	0.87	-2.4
3,022,806	+				-2.0
3,022,806	+				-3.7
3,022,806	+				-2.7
3,022,806	+				-1.9
3,022,806	+				-2.8
3,022,806	+				-0.0
3,022,806	+				-3.1
3,022,806	+				-2.6
3,022,806	+				+0.5
3,022,806	+				-2.4
3,022,806	+				-3.9
3,022,806	+				-2.1
3,022,807	-				-2.5
3,022,807	-				-2.2
3,022,807	-				-2.2
3,022,807	-				-1.6
3,022,807	-				-2.7
3,022,807	-				-1.1
3,022,807	-				-3.2
3,022,807	-				-1.9
3,022,807	-				-2.0
3,022,807	-				+2.0
3,022,807	-				-3.2
3,022,815	+				-1.4
3,022,912	-				+0.6
3,022,931	+				-1.7
3,022,931	+				-0.4
3,022,931	+				-2.8
3,022,931	+				-2.6
3,022,932	-				+3.5
3,022,932	-				-0.3
3,022,934	-				-0.2
3,022,972	+				-2.4
3,022,972	+				-1.4
3,022,973	-				+0.8
3,022,973	-				+0.1
3,023,023	+				-1.2
3,023,023	+				-1.8
3,023,023	+				+3.2
3,023,023	+				+1.3
3,023,023	+				+0.4
3,023,024	-				-1.2
3,023,024	-				-0.7
3,023,024	-				+2.8
3,023,024	-				-0.6
3,023,024	-				+0.5
3,023,024	-				-0.6
3,023,024	-				-1.1
3,023,024	-				+0.6
3,023,024	-				+2.2
3,023,024	-				-0.5
3,023,024	-				-1.6
3,023,024	-				-0.0
3,023,024	-				+0.6
3,023,030	+				-0.0
3,023,030	+				-0.6
3,023,030	+				-1.3
3,023,030	+				-0.9
3,023,030	+				-1.6
3,023,031	-				+0.2
3,023,031	-				-0.8
3,023,031	-				-0.0
3,023,031	-				-0.4
3,023,039	+				-0.2
3,023,047	+				+1.8
3,023,048	-				+3.1
3,023,227	+		Sama_2517	0.13	-0.8
3,023,227	+		Sama_2517	0.13	-0.0
3,023,227	+		Sama_2517	0.13	-1.4
3,023,228	-		Sama_2517	0.13	-3.0
3,023,228	-		Sama_2517	0.13	+0.3
3,023,228	-		Sama_2517	0.13	-1.1
3,023,266	+		Sama_2517	0.16	+1.5
3,023,266	+		Sama_2517	0.16	+2.5
3,023,266	+		Sama_2517	0.16	-2.1
3,023,267	-		Sama_2517	0.16	+0.3
3,023,267	-		Sama_2517	0.16	+0.3
3,023,303	+		Sama_2517	0.18	-0.9
3,023,303	+		Sama_2517	0.18	-2.2
3,023,303	+		Sama_2517	0.18	-0.5
3,023,304	-		Sama_2517	0.19	-1.5
3,023,304	-		Sama_2517	0.19	+0.4
3,023,304	-		Sama_2517	0.19	+0.3
3,023,304	-		Sama_2517	0.19	+0.4
3,023,304	-		Sama_2517	0.19	-1.0
3,023,304	-		Sama_2517	0.19	-2.2
3,023,304	-		Sama_2517	0.19	+0.7
3,023,304	-		Sama_2517	0.19	-2.4
3,023,304	-		Sama_2517	0.19	-0.5
3,023,304	-		Sama_2517	0.19	-0.9
3,023,327	+		Sama_2517	0.20	-1.7
3,023,327	+		Sama_2517	0.20	-0.7
3,023,328	-		Sama_2517	0.20	+2.0
3,023,328	-		Sama_2517	0.20	+1.6
3,023,358	+		Sama_2517	0.23	+0.6
3,023,387	-		Sama_2517	0.25	+1.8
3,023,436	+		Sama_2517	0.29	-0.8
3,023,436	+		Sama_2517	0.29	-0.9
3,023,437	-		Sama_2517	0.29	-0.5
3,023,447	+		Sama_2517	0.30	-0.6
3,023,447	+		Sama_2517	0.30	+0.0
3,023,447	+		Sama_2517	0.30	-0.5
3,023,447	+		Sama_2517	0.30	-2.2
3,023,448	-		Sama_2517	0.30	-1.2
3,023,448	-		Sama_2517	0.30	-1.8
3,023,467	-		Sama_2517	0.31	-1.0
3,023,467	-		Sama_2517	0.31	-2.0
3,023,467	-		Sama_2517	0.31	-0.2
3,023,467	-		Sama_2517	0.31	+1.4
3,023,623	+		Sama_2517	0.43	-2.0
3,023,673	+		Sama_2517	0.47	+1.5
3,023,673	+		Sama_2517	0.47	-2.9
3,023,674	-		Sama_2517	0.47	-0.1
3,023,680	-		Sama_2517	0.48	-0.9
3,023,717	+		Sama_2517	0.51	-2.2
3,023,718	-		Sama_2517	0.51	+0.1
3,023,718	-		Sama_2517	0.51	-1.4
3,023,767	+		Sama_2517	0.54	-0.7
3,023,767	+		Sama_2517	0.54	-2.3
3,023,768	-		Sama_2517	0.54	-0.4
3,023,768	-		Sama_2517	0.54	-2.4
3,023,768	-		Sama_2517	0.54	-0.5
3,023,768	-		Sama_2517	0.54	-1.9
3,023,773	+		Sama_2517	0.55	-2.0
3,023,774	-		Sama_2517	0.55	-1.0
3,023,797	+		Sama_2517	0.57	-0.7
3,023,797	+		Sama_2517	0.57	-2.3
3,023,809	-		Sama_2517	0.58	-0.5
3,023,857	-		Sama_2517	0.61	-0.9
3,023,899	-		Sama_2517	0.65	+0.2
3,023,910	+		Sama_2517	0.66	-1.8
3,023,910	+		Sama_2517	0.66	-1.0
3,023,910	+		Sama_2517	0.66	+0.2
3,024,000	+		Sama_2517	0.72	-1.6
3,024,039	+		Sama_2517	0.76	+2.4
3,024,039	+		Sama_2517	0.76	-2.4
3,024,039	+		Sama_2517	0.76	+0.2
3,024,039	+		Sama_2517	0.76	+0.1
3,024,039	+		Sama_2517	0.76	-1.0
3,024,039	+		Sama_2517	0.76	+0.0
3,024,040	-		Sama_2517	0.76	-1.0
3,024,040	-		Sama_2517	0.76	+1.5
3,024,040	-		Sama_2517	0.76	-3.1
3,024,040	-		Sama_2517	0.76	+2.9
3,024,040	-		Sama_2517	0.76	-0.4
3,024,040	-		Sama_2517	0.76	-1.9
3,024,043	+		Sama_2517	0.76	-0.1
3,024,043	+		Sama_2517	0.76	-2.2
3,024,044	-		Sama_2517	0.76	-1.2
3,024,044	-		Sama_2517	0.76	-2.0
3,024,071	+		Sama_2517	0.78	-1.3
3,024,071	+		Sama_2517	0.78	-2.6
3,024,095	+		Sama_2517	0.80	-2.6
3,024,095	+		Sama_2517	0.80	+1.1
3,024,096	-		Sama_2517	0.80	-2.7
3,024,096	-		Sama_2517	0.80	+0.3
3,024,096	-		Sama_2517	0.80	-1.5
3,024,096	-		Sama_2517	0.80	-1.8
3,024,096	-		Sama_2517	0.80	-1.9
3,024,096	-		Sama_2517	0.80	-2.9
3,024,112	-		Sama_2517	0.81	-0.1
3,024,143	+		Sama_2517	0.84	+1.9
3,024,143	+		Sama_2517	0.84	-2.2
3,024,143	+		Sama_2517	0.84	-1.8
3,024,143	+		Sama_2517	0.84	-1.5
3,024,143	+		Sama_2517	0.84	+1.7
3,024,144	-		Sama_2517	0.84	-2.7
3,024,176	-		Sama_2517	0.86	-2.0
3,024,176	-		Sama_2517	0.86	-1.2
3,024,258	+				-0.5
3,024,258	+				-2.3
3,024,258	+				-2.4
3,024,259	-				+1.2
3,024,263	+				-1.6
3,024,263	+				+0.4
3,024,263	+				-0.2
3,024,264	-				+1.0
3,024,264	-				+0.2
3,024,349	+				-1.1
3,024,350	-				-1.1
3,024,380	+				-1.1
3,024,381	-				-1.0
3,024,381	-				-0.9
3,024,384	-				+0.5
3,024,384	-				+2.6
3,024,384	-				-2.2
3,024,407	-				-1.3
3,024,407	-				+0.7
3,024,442	-				-2.7
3,024,442	-				+1.6
3,024,442	-				-1.8
3,024,444	-				-0.4
3,024,633	-				-0.2
3,024,633	-				+0.8
3,024,657	-				+1.0
3,024,657	-				-0.8
3,024,657	-				-2.9
3,024,657	-				-0.7
3,024,660	-				+0.3
3,024,660	-				-1.1
3,024,660	-				-3.7
3,024,660	-				+4.2
3,024,660	-				-1.1
3,024,718	-				-1.0
3,024,733	-				-1.0
3,024,733	-				-2.4
3,024,736	+				+1.3
3,024,737	-				-0.2
3,024,737	-				+0.0
3,024,737	-				-1.7
3,024,737	-				+0.6
3,024,737	-				-0.2
3,024,754	+				-1.0
3,024,768	-				+0.2
3,024,789	-				+0.5
3,024,789	-				-3.3
3,024,840	-				-1.2
3,024,840	-				+1.8
3,024,840	-				+1.9
3,024,840	-				-1.4
3,024,850	-				+2.1
3,024,850	-				-2.4
3,024,857	+				-0.2
3,024,858	-				+0.5
3,024,858	-				-1.7
3,024,858	-				+0.3
3,024,858	-				-2.6
3,024,858	-				-1.2
3,024,858	-				-3.0
3,024,858	-				-0.2
3,024,858	-				-2.7
3,024,858	-				-0.4
3,024,864	+				+1.0
3,024,865	-				-0.6
3,024,871	-				-0.6
3,024,871	-				+0.2
3,024,871	-				-2.5
3,024,871	-				+0.4
3,024,871	-				+3.1
3,024,871	-				-0.6
3,024,883	-				-0.3
3,024,883	-				-2.1
3,024,898	-				-1.4
3,024,898	-				+1.1
3,024,903	-				-1.6
3,024,903	-				+0.1
3,024,903	-				-2.4
3,024,932	-				-2.2
3,024,984	-				-1.1
3,024,984	-				-0.9
3,024,984	-				+0.1
3,025,002	-				-1.9
3,025,070	+				+1.3
3,025,070	+				-2.0
3,025,113	+				+0.1
3,025,132	+				+1.2
3,025,149	+				+1.1
3,025,150	-				+0.5
3,025,152	+				-1.7
3,025,235	+				-0.9
3,025,262	-				-0.5
3,025,266	+				-1.7
3,025,267	-				-0.0
3,025,267	-				+3.4
3,025,314	+				-1.3
3,025,314	+				+1.7
3,025,314	+				-1.6
3,025,314	+				+1.1
3,025,315	-				-0.7
3,025,315	-				-2.2
3,025,327	+				+0.3
3,025,327	+				-0.5
3,025,327	+				+1.0
3,025,327	+				+2.1
3,025,327	+				-0.8
3,025,328	-				-0.5
3,025,339	+				-1.1
3,025,339	+				-2.5
3,025,340	-				+0.4
3,025,340	-				-0.4