Strain Fitness in Shewanella amazonensis SB2B around Sama_2381

Experiment: L-Histidine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Histidine (N)
2,858,891	+		Sama_2380	0.35	-2.7
2,858,892	-		Sama_2380	0.35	+1.5
2,858,901	-		Sama_2380	0.36	-0.7
2,858,948	+		Sama_2380	0.39	-2.0
2,858,949	-		Sama_2380	0.39	+1.9
2,858,993	+		Sama_2380	0.43	-1.4
2,858,994	-		Sama_2380	0.43	-0.5
2,859,062	-		Sama_2380	0.48	+1.5
2,859,070	+		Sama_2380	0.49	-1.4
2,859,070	+		Sama_2380	0.49	+0.2
2,859,070	+		Sama_2380	0.49	-0.5
2,859,070	+		Sama_2380	0.49	-1.3
2,859,071	-		Sama_2380	0.49	+0.1
2,859,071	-		Sama_2380	0.49	-0.3
2,859,213	+		Sama_2380	0.59	-2.7
2,859,213	+		Sama_2380	0.59	+0.1
2,859,213	+		Sama_2380	0.59	-1.6
2,859,214	-		Sama_2380	0.60	-3.4
2,859,214	-		Sama_2380	0.60	-3.2
2,859,230	+		Sama_2380	0.61	-0.3
2,859,230	+		Sama_2380	0.61	-0.3
2,859,231	-		Sama_2380	0.61	+0.0
2,859,231	-		Sama_2380	0.61	+1.5
2,859,231	-		Sama_2380	0.61	-0.1
2,859,241	+		Sama_2380	0.62	-2.1
2,859,242	-		Sama_2380	0.62	-1.5
2,859,242	-		Sama_2380	0.62	-1.9
2,859,316	+		Sama_2380	0.67	-2.0
2,859,316	+		Sama_2380	0.67	-2.0
2,859,316	+		Sama_2380	0.67	-2.8
2,859,316	+		Sama_2380	0.67	+2.6
2,859,316	+		Sama_2380	0.67	+0.1
2,859,316	+		Sama_2380	0.67	-0.3
2,859,317	-		Sama_2380	0.67	-0.1
2,859,317	-		Sama_2380	0.67	-1.2
2,859,360	+		Sama_2380	0.71	+0.1
2,859,360	+		Sama_2380	0.71	-0.8
2,859,361	-		Sama_2380	0.71	+0.1
2,859,361	-		Sama_2380	0.71	-0.9
2,859,366	+		Sama_2380	0.71	-1.0
2,859,419	+		Sama_2380	0.75	+0.7
2,859,419	+		Sama_2380	0.75	+0.8
2,859,420	-		Sama_2380	0.75	+1.5
2,859,420	-		Sama_2380	0.75	-2.9
2,859,452	-		Sama_2380	0.78	-0.6
2,859,470	+		Sama_2380	0.79	+0.9
2,859,470	+		Sama_2380	0.79	+0.1
2,859,470	+		Sama_2380	0.79	-0.6
2,859,470	+		Sama_2380	0.79	-2.1
2,859,470	+		Sama_2380	0.79	-1.5
2,859,470	+		Sama_2380	0.79	+1.0
2,859,471	-		Sama_2380	0.79	-0.5
2,859,471	-		Sama_2380	0.79	-2.9
2,859,471	-		Sama_2380	0.79	+3.4
2,859,474	+		Sama_2380	0.79	-1.7
2,859,475	-		Sama_2380	0.79	+1.9
2,859,502	+		Sama_2380	0.81	+0.7
2,859,502	+		Sama_2380	0.81	+0.1
2,859,538	+		Sama_2380	0.84	-1.8
2,859,538	+		Sama_2380	0.84	+1.0
2,859,538	+		Sama_2380	0.84	-0.3
2,859,539	-		Sama_2380	0.84	-0.7
2,859,539	-		Sama_2380	0.84	+0.8
2,859,539	-		Sama_2380	0.84	-0.8
2,859,539	-		Sama_2380	0.84	+0.6
2,859,542	+		Sama_2380	0.84	-1.2
2,859,607	-		Sama_2380	0.89	-2.0
2,859,607	-		Sama_2380	0.89	+0.2
2,859,607	-		Sama_2380	0.89	+0.4
2,859,654	+				-1.1
2,859,654	+				+0.4
2,859,654	+				+1.7
2,859,655	-				-1.0
2,859,656	+				-1.0
2,859,656	+				+0.0
2,859,656	+				+0.6
2,859,656	+				-1.9
2,859,657	-				-0.9
2,859,657	-				-2.9
2,859,657	-				-0.2
2,859,737	+				-0.8
2,859,737	+				-1.6
2,859,738	-				-0.7
2,859,738	-				+1.3
2,859,738	-				-0.1
2,859,799	-				+0.1
2,859,808	+				-0.8
2,859,809	-				+1.7
2,859,809	-				-1.1
2,860,036	+		Sama_2381	0.13	-1.1
2,860,036	+		Sama_2381	0.13	-3.0
2,860,036	+		Sama_2381	0.13	+1.7
2,860,037	-		Sama_2381	0.13	+1.3
2,860,115	+		Sama_2381	0.18	-0.7
2,860,115	+		Sama_2381	0.18	-0.1
2,860,115	+		Sama_2381	0.18	-1.7
2,860,115	+		Sama_2381	0.18	+2.6
2,860,116	-		Sama_2381	0.18	-1.2
2,860,116	-		Sama_2381	0.18	-0.0
2,860,116	-		Sama_2381	0.18	-0.0
2,860,116	-		Sama_2381	0.18	-1.4
2,860,158	-		Sama_2381	0.20	-1.7
2,860,158	-		Sama_2381	0.20	-2.9
2,860,188	+		Sama_2381	0.22	+0.1
2,860,189	-		Sama_2381	0.22	-0.7
2,860,296	+		Sama_2381	0.29	+2.4
2,860,296	+		Sama_2381	0.29	-1.4
2,860,305	+		Sama_2381	0.29	-1.0
2,860,562	-		Sama_2381	0.45	+2.3
2,860,595	+		Sama_2381	0.47	-1.6
2,860,607	+		Sama_2381	0.48	-2.3
2,860,607	+		Sama_2381	0.48	+1.1
2,860,608	-		Sama_2381	0.48	-1.8
2,860,608	-		Sama_2381	0.48	-1.7
2,860,638	+		Sama_2381	0.50	+0.0
2,860,639	-		Sama_2381	0.50	-3.1
2,860,639	-		Sama_2381	0.50	-0.1
2,860,656	-		Sama_2381	0.51	-1.1
2,860,697	-		Sama_2381	0.53	+1.0
2,860,707	+		Sama_2381	0.54	-1.0
2,860,708	-		Sama_2381	0.54	+1.0
2,860,708	-		Sama_2381	0.54	+2.0
2,860,749	+		Sama_2381	0.57	+1.1
2,860,806	+		Sama_2381	0.60	-0.3
2,860,807	-		Sama_2381	0.60	+2.3
2,860,808	+		Sama_2381	0.60	+2.0
2,860,808	+		Sama_2381	0.60	+0.1
2,860,808	+		Sama_2381	0.60	-0.4
2,860,809	-		Sama_2381	0.60	+1.6
2,860,809	-		Sama_2381	0.60	-1.0
2,860,838	-		Sama_2381	0.62	+2.3
2,860,847	+		Sama_2381	0.63	-0.9
2,860,847	+		Sama_2381	0.63	-0.4
2,860,847	+		Sama_2381	0.63	+3.4
2,860,847	+		Sama_2381	0.63	-1.3
2,860,848	-		Sama_2381	0.63	-2.2
2,860,848	-		Sama_2381	0.63	+0.5
2,860,848	-		Sama_2381	0.63	+0.0
2,860,862	+		Sama_2381	0.63	-3.5
2,860,863	-		Sama_2381	0.64	+0.3
2,860,933	+		Sama_2381	0.68	-0.5
2,860,934	-		Sama_2381	0.68	+0.1
2,860,990	-		Sama_2381	0.71	-1.9
2,860,990	-		Sama_2381	0.71	-1.0
2,861,007	+		Sama_2381	0.72	+0.5
2,861,009	+		Sama_2381	0.72	+0.5
2,861,009	+		Sama_2381	0.72	-0.8
2,861,010	-		Sama_2381	0.73	-0.0
2,861,198	-		Sama_2381	0.84	-2.6
2,861,217	+		Sama_2381	0.85	+5.3
2,861,217	+		Sama_2381	0.85	-0.9
2,861,217	+		Sama_2381	0.85	+0.9
2,861,217	+		Sama_2381	0.85	-0.8
2,861,218	-		Sama_2381	0.85	+0.5
2,861,218	-		Sama_2381	0.85	-1.9
2,861,218	-		Sama_2381	0.85	-2.2
2,861,219	-		Sama_2381	0.85	-0.5
2,861,227	+		Sama_2381	0.86	-2.2
2,861,227	+		Sama_2381	0.86	-1.0
2,861,228	-		Sama_2381	0.86	-0.8
2,861,228	-		Sama_2381	0.86	+1.3
2,861,228	-		Sama_2381	0.86	-3.1
2,861,269	-		Sama_2381	0.88	-1.6
2,861,269	-		Sama_2381	0.88	-2.1
2,861,269	-		Sama_2381	0.88	-1.1
2,861,292	+		Sama_2381	0.90	-1.6
2,861,293	-		Sama_2381	0.90	-2.2
2,861,293	-		Sama_2381	0.90	+1.3
2,861,293	-		Sama_2381	0.90	+0.3
2,861,394	+				-0.5
2,861,394	+				-1.5
2,861,394	+				+1.2
2,861,501	+				-0.3
2,861,502	-				-1.3
2,861,502	-				-2.6
2,861,718	+				-0.7
2,861,756	+				+3.7
2,861,781	-				+0.8
2,861,882	-				-2.1
2,862,122	+				-1.5
2,862,122	+				+0.3
2,862,123	-				+0.9
2,862,162	-				+0.5
2,862,165	+				-2.0
2,862,165	+				-1.6
2,862,165	+				-0.9
2,862,165	+				-3.3
2,862,165	+				+1.8
2,862,165	+				-0.9
2,862,165	+				-0.3
2,862,166	-				-1.9
2,862,166	-				-1.0
2,862,166	-				-0.1
2,862,166	-				-1.2
2,862,166	-				-0.9
2,862,190	+				+0.1
2,862,190	+				+0.9
2,862,191	-				-2.6
2,862,191	-				+0.3
2,862,197	+				-3.5
2,862,324	+				+0.4
2,862,324	+				+0.0
2,862,325	-				-1.2
2,862,342	+				+1.3
2,862,403	+				+1.2