Strain Fitness in Shewanella amazonensis SB2B around Sama_1631

Experiment: L-Histidine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Histidine (N)
1,995,002	+		Sama_1630	0.19	-1.5
1,995,067	+		Sama_1630	0.27	-2.5
1,995,106	+		Sama_1630	0.31	-1.9
1,995,120	+		Sama_1630	0.33	-0.3
1,995,121	-		Sama_1630	0.33	-1.8
1,995,121	-		Sama_1630	0.33	-1.7
1,995,121	-		Sama_1630	0.33	-0.5
1,995,193	+		Sama_1630	0.41	-1.2
1,995,199	+		Sama_1630	0.42	-1.0
1,995,199	+		Sama_1630	0.42	-1.2
1,995,199	+		Sama_1630	0.42	-1.5
1,995,199	+		Sama_1630	0.42	-1.7
1,995,200	-		Sama_1630	0.42	-1.9
1,995,200	-		Sama_1630	0.42	-0.9
1,995,212	+		Sama_1630	0.43	-3.4
1,995,301	-		Sama_1630	0.53	-2.0
1,995,326	+		Sama_1630	0.56	-0.8
1,995,351	-		Sama_1630	0.59	-2.6
1,995,351	-		Sama_1630	0.59	+0.1
1,995,400	-		Sama_1630	0.64	-1.9
1,995,400	-		Sama_1630	0.64	-2.8
1,995,460	-		Sama_1630	0.71	-1.4
1,995,511	+		Sama_1630	0.77	-1.2
1,995,511	+		Sama_1630	0.77	-2.0
1,995,511	+		Sama_1630	0.77	-2.0
1,995,512	-		Sama_1630	0.77	-1.2
1,995,512	-		Sama_1630	0.77	-2.0
1,995,512	-		Sama_1630	0.77	-4.1
1,995,569	+		Sama_1630	0.83	-0.8
1,995,627	-		Sama_1630	0.90	-1.0
1,995,681	+				-0.9
1,995,681	+				+0.0
1,995,682	-				-0.8
1,995,682	-				-1.3
1,995,682	-				-1.1
1,995,682	-				-2.4
1,995,682	-				-1.6
1,995,721	+				-1.1
1,995,721	+				-1.1
1,995,721	+				-2.3
1,995,721	+				-3.0
1,995,722	-				-0.9
1,995,722	-				-1.2
1,995,722	-				-2.2
1,995,722	-				-1.7
1,995,745	-				-1.6
1,995,784	+				+1.2
1,995,826	-				-1.8
1,995,846	+				-2.2
1,995,846	+				-1.0
1,995,846	+				-0.9
1,995,846	+				-0.3
1,995,846	+				+0.0
1,995,846	+				-0.9
1,995,846	+				-0.6
1,995,847	-				-0.1
1,995,847	-				-0.6
1,995,847	-				-2.3
1,995,847	-				-1.5
1,995,847	-				-1.6
1,995,891	-				-2.3
1,995,932	+				-0.9
1,995,989	+				-2.7
1,996,043	+				-1.5
1,996,080	+		Sama_1631	0.10	-2.0
1,996,089	-		Sama_1631	0.11	-0.1
1,996,183	+		Sama_1631	0.17	-0.4
1,996,223	+		Sama_1631	0.20	-0.6
1,996,223	+		Sama_1631	0.20	-2.2
1,996,286	+		Sama_1631	0.24	-0.6
1,996,286	+		Sama_1631	0.24	-1.4
1,996,286	+		Sama_1631	0.24	-1.0
1,996,287	-		Sama_1631	0.24	-1.7
1,996,287	-		Sama_1631	0.24	-1.8
1,996,421	+		Sama_1631	0.33	-4.0
1,996,426	+		Sama_1631	0.34	-3.5
1,996,426	+		Sama_1631	0.34	-1.5
1,996,427	-		Sama_1631	0.34	-2.0
1,996,427	-		Sama_1631	0.34	-1.5
1,996,427	-		Sama_1631	0.34	-1.9
1,996,448	+		Sama_1631	0.35	-1.0
1,996,521	-		Sama_1631	0.40	-1.3
1,996,560	+		Sama_1631	0.43	-1.8
1,996,560	+		Sama_1631	0.43	-1.9
1,996,560	+		Sama_1631	0.43	-1.4
1,996,689	-		Sama_1631	0.51	-1.1
1,996,758	+		Sama_1631	0.56	-2.6
1,996,773	-		Sama_1631	0.57	-3.2
1,996,799	+		Sama_1631	0.59	-0.7
1,996,806	+		Sama_1631	0.59	-1.5
1,996,935	+		Sama_1631	0.68	-0.5
1,996,935	+		Sama_1631	0.68	-1.7
1,996,935	+		Sama_1631	0.68	-1.6
1,996,935	+		Sama_1631	0.68	-0.3
1,997,045	+		Sama_1631	0.75	-2.3
1,997,045	+		Sama_1631	0.75	-3.2
1,997,045	+		Sama_1631	0.75	-1.0
1,997,177	+		Sama_1631	0.84	-2.0
1,997,178	-		Sama_1631	0.84	-1.3
1,997,244	+		Sama_1631	0.88	-3.5
1,997,244	+		Sama_1631	0.88	-2.7
1,997,245	-		Sama_1631	0.88	-2.1
1,997,245	-		Sama_1631	0.88	+0.1
1,997,245	-		Sama_1631	0.88	-2.2
1,997,294	+				-1.6
1,997,295	-				-2.8
1,997,415	+				-3.5
1,997,540	-				-0.3
1,997,540	-				-1.7
1,997,577	+				-1.2
1,997,666	+		Sama_1632	0.11	-2.8
1,997,667	-		Sama_1632	0.12	-2.9
1,997,673	-		Sama_1632	0.12	-3.2
1,997,752	+		Sama_1632	0.16	-0.5
1,997,768	-		Sama_1632	0.17	-2.2
1,997,809	+		Sama_1632	0.19	-1.5
1,997,810	-		Sama_1632	0.19	-2.3
1,997,810	-		Sama_1632	0.19	-1.6
1,997,816	+		Sama_1632	0.19	-2.4
1,997,817	-		Sama_1632	0.19	-0.2
1,997,817	-		Sama_1632	0.19	-2.2
1,997,817	-		Sama_1632	0.19	-1.2
1,997,856	-		Sama_1632	0.21	-3.3
1,997,873	+		Sama_1632	0.22	-2.8
1,997,873	+		Sama_1632	0.22	-3.4
1,997,878	-		Sama_1632	0.22	-1.8
1,997,878	-		Sama_1632	0.22	-2.6
1,997,878	-		Sama_1632	0.22	-3.4
1,997,912	+		Sama_1632	0.24	-0.8
1,997,996	+		Sama_1632	0.28	-2.5
1,998,073	+		Sama_1632	0.32	-1.8
1,998,073	+		Sama_1632	0.32	-2.0
1,998,073	+		Sama_1632	0.32	-1.0
1,998,074	-		Sama_1632	0.32	+0.9
1,998,077	+		Sama_1632	0.32	-1.3
1,998,077	+		Sama_1632	0.32	-1.8
1,998,077	+		Sama_1632	0.32	+0.7
1,998,077	+		Sama_1632	0.32	-2.3
1,998,077	+		Sama_1632	0.32	-1.2
1,998,077	+		Sama_1632	0.32	-1.0
1,998,078	-		Sama_1632	0.32	-2.5
1,998,078	-		Sama_1632	0.32	-0.9
1,998,078	-		Sama_1632	0.32	-0.6
1,998,078	-		Sama_1632	0.32	-1.2
1,998,096	+		Sama_1632	0.33	-2.1
1,998,096	+		Sama_1632	0.33	-0.9
1,998,097	-		Sama_1632	0.33	-1.8
1,998,110	-		Sama_1632	0.34	-2.8
1,998,164	-		Sama_1632	0.36	-3.3
1,998,241	+		Sama_1632	0.40	-3.2
1,998,241	+		Sama_1632	0.40	-2.3
1,998,241	+		Sama_1632	0.40	-1.3
1,998,241	+		Sama_1632	0.40	-2.2
1,998,241	+		Sama_1632	0.40	-1.8
1,998,242	-		Sama_1632	0.40	-0.5
1,998,245	-		Sama_1632	0.40	-0.9
1,998,408	+		Sama_1632	0.48	-2.4