Strain Fitness in Shewanella amazonensis SB2B around Sama_1451

Experiment: L-Histidine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Histidine (N)
1,760,398	-				+0.1
1,760,429	+				+0.7
1,760,446	-				+1.2
1,760,468	+				+1.0
1,760,469	-				-0.3
1,760,498	-				+1.0
1,760,498	-				-1.2
1,760,525	+				+2.3
1,760,530	+				-0.7
1,760,530	+				+1.4
1,760,530	+				-0.9
1,760,530	+				+0.6
1,760,530	+				+0.9
1,760,531	-				-0.9
1,760,531	-				+3.6
1,760,563	-				+2.6
1,760,605	+				+0.0
1,760,605	+				+0.5
1,760,643	+		Sama_1450	0.15	+2.1
1,760,712	+		Sama_1450	0.31	+0.7
1,760,712	+		Sama_1450	0.31	-1.1
1,760,712	+		Sama_1450	0.31	-0.7
1,760,713	-		Sama_1450	0.31	-0.9
1,760,716	+		Sama_1450	0.32	+1.4
1,760,716	+		Sama_1450	0.32	-0.9
1,760,716	+		Sama_1450	0.32	-0.9
1,760,722	+		Sama_1450	0.33	+0.8
1,760,722	+		Sama_1450	0.33	+0.5
1,760,722	+		Sama_1450	0.33	-2.1
1,760,722	+		Sama_1450	0.33	+1.5
1,760,723	-		Sama_1450	0.34	-1.2
1,760,723	-		Sama_1450	0.34	-2.1
1,760,842	+		Sama_1450	0.62	-0.1
1,760,902	+		Sama_1450	0.76	+2.6
1,760,914	+		Sama_1450	0.79	-0.5
1,760,915	-		Sama_1450	0.79	-0.3
1,760,975	+				-2.1
1,760,975	+				-1.2
1,760,976	-				-0.8
1,760,999	+				+1.5
1,760,999	+				+0.1
1,760,999	+				-0.5
1,760,999	+				+1.5
1,760,999	+				-2.5
1,761,000	-				-2.0
1,761,022	+				-1.9
1,761,054	+				+0.0
1,761,054	+				-1.4
1,761,055	-				+1.7
1,761,055	-				+1.0
1,761,068	+				-0.2
1,761,068	+				+1.5
1,761,076	-				+4.9
1,761,076	-				+0.0
1,761,081	-				-0.9
1,761,081	-				-1.6
1,761,113	+				+1.0
1,761,114	-				-0.6
1,761,126	+				+0.5
1,761,127	-				-0.6
1,761,183	-				+1.1
1,761,198	+				-1.3
1,761,208	+				-1.4
1,761,208	+				-1.1
1,761,208	+				+2.3
1,761,208	+				-0.6
1,761,208	+				-0.4
1,761,209	-				-2.8
1,761,311	-				+1.4
1,761,322	-				+2.5
1,761,427	+				-1.5
1,761,428	-				+1.0
1,761,464	+				-1.7
1,761,490	+				+2.2
1,761,490	+				+3.1
1,761,490	+				-1.1
1,761,571	+				+2.9
1,761,602	+		Sama_1451	0.10	+0.8
1,761,602	+		Sama_1451	0.10	-0.2
1,761,693	+		Sama_1451	0.15	-1.4
1,761,694	-		Sama_1451	0.15	+1.2
1,761,694	-		Sama_1451	0.15	+0.1
1,761,774	+		Sama_1451	0.18	+3.0
1,761,774	+		Sama_1451	0.18	+1.9
1,761,774	+		Sama_1451	0.18	+0.1
1,761,774	+		Sama_1451	0.18	+0.7
1,761,774	+		Sama_1451	0.18	-0.6
1,761,774	+		Sama_1451	0.18	+1.6
1,761,852	+		Sama_1451	0.22	-1.3
1,761,923	+		Sama_1451	0.25	-2.0
1,762,092	+		Sama_1451	0.33	-0.7
1,762,093	-		Sama_1451	0.33	-1.6
1,762,093	-		Sama_1451	0.33	-0.4
1,762,093	-		Sama_1451	0.33	+0.2
1,762,106	+		Sama_1451	0.33	-0.6
1,762,106	+		Sama_1451	0.33	+0.7
1,762,251	+		Sama_1451	0.40	+1.4
1,762,251	+		Sama_1451	0.40	-1.5
1,762,251	+		Sama_1451	0.40	+3.0
1,762,252	-		Sama_1451	0.40	-1.6
1,762,377	+		Sama_1451	0.46	-1.9
1,762,377	+		Sama_1451	0.46	+2.0
1,762,378	-		Sama_1451	0.46	+2.6
1,762,401	+		Sama_1451	0.47	+0.4
1,762,402	-		Sama_1451	0.47	-0.7
1,762,414	+		Sama_1451	0.48	-2.0
1,762,414	+		Sama_1451	0.48	+4.1
1,762,414	+		Sama_1451	0.48	+0.5
1,762,425	+		Sama_1451	0.48	-3.3
1,762,431	+		Sama_1451	0.48	-0.1
1,762,432	-		Sama_1451	0.48	+1.7
1,762,432	-		Sama_1451	0.48	-1.0
1,762,547	+		Sama_1451	0.54	+1.8
1,762,547	+		Sama_1451	0.54	+1.2
1,762,548	-		Sama_1451	0.54	-1.1
1,762,557	-		Sama_1451	0.54	+1.7
1,762,584	+		Sama_1451	0.55	-1.1
1,762,621	-		Sama_1451	0.57	+1.0
1,762,678	+		Sama_1451	0.60	+0.4
1,762,679	-		Sama_1451	0.60	-0.3
1,762,679	-		Sama_1451	0.60	+1.1
1,762,723	-		Sama_1451	0.62	-1.0
1,762,778	+		Sama_1451	0.64	-3.0
1,762,811	+		Sama_1451	0.66	-1.8
1,762,811	+		Sama_1451	0.66	-0.9
1,762,811	+		Sama_1451	0.66	-0.5
1,762,812	-		Sama_1451	0.66	+2.1
1,762,812	-		Sama_1451	0.66	-0.7
1,762,857	-		Sama_1451	0.68	-0.7
1,762,914	+		Sama_1451	0.70	+0.4
1,762,914	+		Sama_1451	0.70	-3.1
1,762,914	+		Sama_1451	0.70	+3.0
1,762,934	+		Sama_1451	0.71	-1.7
1,762,935	-		Sama_1451	0.71	+0.7
1,762,935	-		Sama_1451	0.71	+2.5
1,762,935	-		Sama_1451	0.71	-0.9
1,763,086	-		Sama_1451	0.78	+0.9
1,763,152	-		Sama_1451	0.81	-0.3
1,763,175	+		Sama_1451	0.82	-2.1
1,763,175	+		Sama_1451	0.82	-0.9
1,763,175	+		Sama_1451	0.82	+1.1
1,763,182	-		Sama_1451	0.83	-2.2
1,763,189	+		Sama_1451	0.83	+0.5
1,763,194	-		Sama_1451	0.83	+1.0
1,763,325	+		Sama_1451	0.89	-0.3
1,763,326	-		Sama_1451	0.89	-2.3
1,763,328	+		Sama_1451	0.89	-3.2
1,763,328	+		Sama_1451	0.89	+1.8
1,763,329	-		Sama_1451	0.89	-2.0
1,763,329	-		Sama_1451	0.89	-1.7
1,763,361	+				-3.1
1,763,361	+				+0.8
1,763,361	+				-0.6
1,763,361	+				-1.7
1,763,362	-				-0.5
1,763,399	+				+0.5
1,763,412	+				-1.0
1,763,412	+				-0.0
1,763,412	+				-0.9
1,763,412	+				-1.9
1,763,412	+				+1.1
1,763,412	+				-2.1
1,763,413	-				+1.0
1,763,445	+				+0.5
1,763,505	+				+0.8
1,763,505	+				-2.0
1,763,505	+				+1.1
1,763,505	+				-2.5
1,763,505	+				+3.0
1,763,505	+				+2.0
1,763,505	+				-2.2
1,763,507	+				-0.8
1,763,507	+				+1.9
1,763,563	-				-2.1
1,763,624	+				+1.9
1,763,624	+				-3.4
1,763,624	+				-1.5
1,763,624	+				-1.7
1,763,624	+				-1.9
1,763,624	+				+0.4
1,763,624	+				-1.0
1,763,625	-				+3.9
1,763,625	-				+2.7
1,763,625	-				-0.7
1,763,625	-				-0.9
1,763,656	+		Sama_1452	0.11	+0.9
1,763,656	+		Sama_1452	0.11	-0.1
1,763,656	+		Sama_1452	0.11	-0.9
1,763,657	-		Sama_1452	0.12	+1.5
1,763,657	-		Sama_1452	0.12	-1.5
1,763,657	-		Sama_1452	0.12	+1.5
1,763,671	-		Sama_1452	0.17	+0.4
1,763,671	-		Sama_1452	0.17	+0.1
1,763,674	+		Sama_1452	0.18	+0.9
1,763,674	+		Sama_1452	0.18	-2.4
1,763,674	+		Sama_1452	0.18	-0.0
1,763,675	-		Sama_1452	0.19	+3.0
1,763,675	-		Sama_1452	0.19	+0.9
1,763,697	+		Sama_1452	0.27	+2.0
1,763,759	+		Sama_1452	0.50	-1.7
1,763,759	+		Sama_1452	0.50	+0.1
1,763,770	+		Sama_1452	0.55	-1.0
1,763,770	+		Sama_1452	0.55	-2.3
1,763,771	-		Sama_1452	0.55	+1.4
1,763,868	+				+0.1
1,763,887	+				+3.4
1,764,001	+		Sama_1453	0.17	+6.1
1,764,005	+		Sama_1453	0.17	+2.7
1,764,005	+		Sama_1453	0.17	+1.6
1,764,006	-		Sama_1453	0.17	+2.9
1,764,006	-		Sama_1453	0.17	+0.6
1,764,067	+		Sama_1453	0.27	-1.7
1,764,067	+		Sama_1453	0.27	-0.5
1,764,067	+		Sama_1453	0.27	-0.5
1,764,068	-		Sama_1453	0.27	+1.4
1,764,068	-		Sama_1453	0.27	+2.9
1,764,121	+		Sama_1453	0.35	-1.1
1,764,121	+		Sama_1453	0.35	-0.9
1,764,121	+		Sama_1453	0.35	+2.5
1,764,122	-		Sama_1453	0.35	+3.9
1,764,124	+		Sama_1453	0.36	+0.8
1,764,124	+		Sama_1453	0.36	-0.9
1,764,124	+		Sama_1453	0.36	+0.4
1,764,125	-		Sama_1453	0.36	+1.9
1,764,125	-		Sama_1453	0.36	-1.3
1,764,142	+		Sama_1453	0.38	-1.1
1,764,142	+		Sama_1453	0.38	-0.9
1,764,143	-		Sama_1453	0.39	+4.1
1,764,183	+		Sama_1453	0.45	+1.4
1,764,183	+		Sama_1453	0.45	+2.6
1,764,183	+		Sama_1453	0.45	+1.1
1,764,183	+		Sama_1453	0.45	-1.5
1,764,183	+		Sama_1453	0.45	-0.4
1,764,184	-		Sama_1453	0.45	-0.3
1,764,204	+		Sama_1453	0.48	+3.5
1,764,225	+		Sama_1453	0.51	+1.4
1,764,226	-		Sama_1453	0.51	+0.4
1,764,276	+		Sama_1453	0.59	+3.9
1,764,373	+		Sama_1453	0.74	-0.5
1,764,373	+		Sama_1453	0.74	-0.1
1,764,374	-		Sama_1453	0.74	-0.3
1,764,386	+		Sama_1453	0.76	-1.1
1,764,386	+		Sama_1453	0.76	+0.4
1,764,386	+		Sama_1453	0.76	+1.2
1,764,386	+		Sama_1453	0.76	+3.0
1,764,386	+		Sama_1453	0.76	+1.2
1,764,386	+		Sama_1453	0.76	-1.3
1,764,386	+		Sama_1453	0.76	+0.3
1,764,386	+		Sama_1453	0.76	-0.0
1,764,387	-		Sama_1453	0.76	+2.0
1,764,387	-		Sama_1453	0.76	+3.2
1,764,403	+		Sama_1453	0.79	-1.1
1,764,403	+		Sama_1453	0.79	-1.4
1,764,404	-		Sama_1453	0.79	+1.0
1,764,404	-		Sama_1453	0.79	-0.1
1,764,409	+		Sama_1453	0.80	+1.5
1,764,455	-		Sama_1453	0.87	+1.2
1,764,486	-				+0.4
1,764,531	+				-0.7