Strain Fitness in Shewanella amazonensis SB2B around Sama_1275

Experiment: L-Histidine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Histidine (N)
1,562,765	+		Sama_1274	0.24	-2.6
1,562,765	+		Sama_1274	0.24	-1.2
1,562,765	+		Sama_1274	0.24	+1.8
1,562,765	+		Sama_1274	0.24	+1.0
1,562,766	-		Sama_1274	0.24	-3.0
1,562,766	-		Sama_1274	0.24	-0.4
1,562,813	+		Sama_1274	0.29	-1.7
1,562,813	+		Sama_1274	0.29	-0.8
1,562,865	+		Sama_1274	0.35	-2.2
1,562,887	+		Sama_1274	0.37	-0.2
1,562,887	+		Sama_1274	0.37	+0.0
1,562,887	+		Sama_1274	0.37	-1.7
1,562,887	+		Sama_1274	0.37	+6.2
1,562,887	+		Sama_1274	0.37	-2.3
1,562,888	-		Sama_1274	0.37	-1.6
1,562,888	-		Sama_1274	0.37	-0.3
1,562,888	-		Sama_1274	0.37	-1.4
1,562,963	+		Sama_1274	0.45	+1.4
1,562,964	-		Sama_1274	0.45	-1.5
1,563,000	-		Sama_1274	0.49	-2.3
1,563,011	+		Sama_1274	0.50	-2.3
1,563,012	-		Sama_1274	0.51	+1.8
1,563,012	-		Sama_1274	0.51	-0.4
1,563,015	+		Sama_1274	0.51	+0.1
1,563,015	+		Sama_1274	0.51	-2.0
1,563,015	+		Sama_1274	0.51	+0.2
1,563,015	+		Sama_1274	0.51	-0.3
1,563,016	-		Sama_1274	0.51	+0.4
1,563,016	-		Sama_1274	0.51	-1.6
1,563,023	+		Sama_1274	0.52	+0.7
1,563,023	+		Sama_1274	0.52	-0.3
1,563,023	+		Sama_1274	0.52	+3.7
1,563,100	-		Sama_1274	0.60	-0.6
1,563,214	+		Sama_1274	0.72	-1.8
1,563,215	-		Sama_1274	0.72	+0.4
1,563,216	+		Sama_1274	0.72	-0.9
1,563,216	+		Sama_1274	0.72	+1.9
1,563,217	-		Sama_1274	0.72	-1.5
1,563,300	-		Sama_1274	0.81	+0.4
1,563,300	-		Sama_1274	0.81	+0.8
1,563,315	+		Sama_1274	0.83	-0.7
1,563,315	+		Sama_1274	0.83	-0.4
1,563,315	+		Sama_1274	0.83	+2.6
1,563,315	+		Sama_1274	0.83	-1.0
1,563,315	+		Sama_1274	0.83	+0.9
1,563,315	+		Sama_1274	0.83	+1.4
1,563,316	-		Sama_1274	0.83	-1.1
1,563,316	-		Sama_1274	0.83	-1.3
1,563,316	-		Sama_1274	0.83	-0.7
1,563,377	+		Sama_1274	0.90	+1.2
1,563,377	+		Sama_1274	0.90	+2.5
1,563,377	+		Sama_1274	0.90	+2.2
1,563,377	+		Sama_1274	0.90	+1.8
1,563,378	-		Sama_1274	0.90	-1.8
1,563,413	+				+1.3
1,563,413	+				-0.4
1,563,413	+				+0.2
1,563,413	+				+0.3
1,563,414	-				-0.1
1,563,414	-				-2.1
1,563,414	-				+1.5
1,563,414	-				+1.4
1,563,414	-				-2.0
1,563,414	-				-1.4
1,563,424	+				+0.4
1,563,424	+				-2.4
1,563,425	-				+0.3
1,563,491	+				-1.4
1,563,492	-				-1.9
1,563,570	+				+0.0
1,563,570	+				+1.8
1,563,643	-				-0.7
1,563,662	-				-2.1
1,563,672	+				+1.7
1,563,673	-				-0.5
1,563,673	-				+0.4
1,563,675	+				-1.5
1,563,675	+				-1.2
1,563,715	+				-0.7
1,563,716	-				+3.4
1,563,716	-				+1.4
1,563,717	+				-0.2
1,563,718	-				+0.9
1,563,718	-				+0.3
1,563,718	-				-1.7
1,563,718	-				-0.7
1,563,745	+				-2.3
1,563,745	+				+0.6
1,563,745	+				+0.7
1,563,745	+				+0.8
1,563,745	+				+1.6
1,563,745	+				+0.5
1,563,745	+				+1.2
1,563,745	+				-1.3
1,563,745	+				+0.1
1,563,745	+				-1.2
1,563,745	+				-0.5
1,563,746	-				+0.3
1,563,746	-				-1.4
1,563,746	-				-1.4
1,563,746	-				+1.1
1,563,746	-				-1.3
1,563,746	-				+0.2
1,563,746	-				-1.7
1,563,746	-				+0.2
1,563,746	-				-1.7
1,563,746	-				-1.2
1,563,746	-				+0.1
1,563,747	+				-2.9
1,563,747	+				-2.1
1,563,747	+				+0.9
1,563,747	+				+0.7
1,563,816	+				-1.5
1,563,816	+				+1.7
1,563,856	+				-0.7
1,563,856	+				-1.2
1,563,964	+		Sama_1275	0.10	-1.7
1,563,966	+		Sama_1275	0.10	+0.7
1,563,967	-		Sama_1275	0.10	-1.5
1,563,967	-		Sama_1275	0.10	+1.2
1,563,985	+		Sama_1275	0.11	-0.8
1,563,985	+		Sama_1275	0.11	-0.0
1,563,986	-		Sama_1275	0.11	+2.0
1,563,986	-		Sama_1275	0.11	+1.4
1,563,986	-		Sama_1275	0.11	+0.7
1,563,986	-		Sama_1275	0.11	-2.0
1,563,986	-		Sama_1275	0.11	-0.7
1,563,987	+		Sama_1275	0.11	-3.0
1,563,988	-		Sama_1275	0.11	-0.5
1,564,013	+		Sama_1275	0.13	-1.1
1,564,013	+		Sama_1275	0.13	-3.0
1,564,013	+		Sama_1275	0.13	-1.2
1,564,014	-		Sama_1275	0.13	+4.0
1,564,014	-		Sama_1275	0.13	+1.7
1,564,014	-		Sama_1275	0.13	-0.6
1,564,014	-		Sama_1275	0.13	+2.6
1,564,102	-		Sama_1275	0.17	+0.4
1,564,162	+		Sama_1275	0.20	-1.3
1,564,162	+		Sama_1275	0.20	-1.0
1,564,162	+		Sama_1275	0.20	-0.4
1,564,162	+		Sama_1275	0.20	-1.3
1,564,163	-		Sama_1275	0.20	+2.8
1,564,163	-		Sama_1275	0.20	+3.9
1,564,220	+		Sama_1275	0.22	-0.8
1,564,220	+		Sama_1275	0.22	-0.2
1,564,220	+		Sama_1275	0.22	+1.4
1,564,220	+		Sama_1275	0.22	-1.6
1,564,220	+		Sama_1275	0.22	+0.2
1,564,220	+		Sama_1275	0.22	+0.3
1,564,221	-		Sama_1275	0.22	-0.4
1,564,221	-		Sama_1275	0.22	-1.6
1,564,221	-		Sama_1275	0.22	-0.1
1,564,221	-		Sama_1275	0.22	+0.0
1,564,225	+		Sama_1275	0.23	-2.0
1,564,241	-		Sama_1275	0.23	+0.9
1,564,308	+		Sama_1275	0.26	-0.1
1,564,309	-		Sama_1275	0.26	-0.2
1,564,344	+		Sama_1275	0.28	+1.0
1,564,402	+		Sama_1275	0.31	-0.8
1,564,402	+		Sama_1275	0.31	-0.9
1,564,402	+		Sama_1275	0.31	-0.9
1,564,403	-		Sama_1275	0.31	-1.5
1,564,447	+		Sama_1275	0.33	+0.2
1,564,447	+		Sama_1275	0.33	+1.8
1,564,447	+		Sama_1275	0.33	+0.2
1,564,447	+		Sama_1275	0.33	+0.2
1,564,447	+		Sama_1275	0.33	+0.4
1,564,448	-		Sama_1275	0.33	+2.3
1,564,448	-		Sama_1275	0.33	-0.7
1,564,448	-		Sama_1275	0.33	+1.5
1,564,448	-		Sama_1275	0.33	-1.0
1,564,448	-		Sama_1275	0.33	-0.8
1,564,448	-		Sama_1275	0.33	-0.4
1,564,448	-		Sama_1275	0.33	-1.3
1,564,448	-		Sama_1275	0.33	-0.3
1,564,462	+		Sama_1275	0.34	+0.6
1,564,462	+		Sama_1275	0.34	-2.3
1,564,463	-		Sama_1275	0.34	+0.9
1,564,463	-		Sama_1275	0.34	+0.8
1,564,516	+		Sama_1275	0.36	-1.9
1,564,516	+		Sama_1275	0.36	-1.6
1,564,516	+		Sama_1275	0.36	-1.8
1,564,516	+		Sama_1275	0.36	+1.9
1,564,517	-		Sama_1275	0.36	-1.1
1,564,517	-		Sama_1275	0.36	-1.3
1,564,571	-		Sama_1275	0.39	-2.5
1,564,591	-		Sama_1275	0.40	+7.5
1,564,591	-		Sama_1275	0.40	-2.6
1,564,591	-		Sama_1275	0.40	+1.2
1,564,677	+		Sama_1275	0.44	-1.8
1,564,678	-		Sama_1275	0.44	-0.3
1,564,678	-		Sama_1275	0.44	+0.8
1,564,701	+		Sama_1275	0.45	-1.9
1,564,701	+		Sama_1275	0.45	-0.8
1,564,722	-		Sama_1275	0.46	-2.4
1,564,783	+		Sama_1275	0.49	-0.7
1,564,783	+		Sama_1275	0.49	+1.4
1,564,783	+		Sama_1275	0.49	-2.0
1,564,783	+		Sama_1275	0.49	-0.8
1,564,784	-		Sama_1275	0.49	-0.3
1,564,788	+		Sama_1275	0.49	+1.0
1,564,788	+		Sama_1275	0.49	+2.9
1,564,846	+		Sama_1275	0.52	+1.8
1,564,847	-		Sama_1275	0.52	-1.9
1,564,847	-		Sama_1275	0.52	-1.5
1,564,847	-		Sama_1275	0.52	-2.1
1,564,847	-		Sama_1275	0.52	-3.4
1,564,951	-		Sama_1275	0.57	+0.6
1,564,953	+		Sama_1275	0.57	+0.7
1,564,953	+		Sama_1275	0.57	+1.7
1,564,954	-		Sama_1275	0.57	-1.2
1,564,954	-		Sama_1275	0.57	+1.6
1,564,974	+		Sama_1275	0.58	+2.8
1,564,975	-		Sama_1275	0.58	+1.1
1,564,986	+		Sama_1275	0.58	-0.4
1,565,023	+		Sama_1275	0.60	+1.1
1,565,024	-		Sama_1275	0.60	+1.5
1,565,122	+		Sama_1275	0.65	-2.1
1,565,212	+		Sama_1275	0.69	+0.6
1,565,212	+		Sama_1275	0.69	-0.7
1,565,213	-		Sama_1275	0.69	-1.6
1,565,216	+		Sama_1275	0.69	+1.2
1,565,216	+		Sama_1275	0.69	+0.2
1,565,216	+		Sama_1275	0.69	+1.7
1,565,216	+		Sama_1275	0.69	-1.1
1,565,217	-		Sama_1275	0.69	-1.9
1,565,217	-		Sama_1275	0.69	-0.8
1,565,217	-		Sama_1275	0.69	-0.8
1,565,245	+		Sama_1275	0.71	-2.4
1,565,245	+		Sama_1275	0.71	+0.3
1,565,246	-		Sama_1275	0.71	-1.8
1,565,246	-		Sama_1275	0.71	+0.9
1,565,246	-		Sama_1275	0.71	-0.8
1,565,246	-		Sama_1275	0.71	+1.0
1,565,250	+		Sama_1275	0.71	+0.0
1,565,266	+		Sama_1275	0.72	-0.6
1,565,266	+		Sama_1275	0.72	-0.3
1,565,267	-		Sama_1275	0.72	+0.7
1,565,267	-		Sama_1275	0.72	+1.2
1,565,267	-		Sama_1275	0.72	-0.5
1,565,267	-		Sama_1275	0.72	-2.1
1,565,368	+		Sama_1275	0.76	+1.1
1,565,368	+		Sama_1275	0.76	-2.8
1,565,368	+		Sama_1275	0.76	+2.2
1,565,369	-		Sama_1275	0.77	+2.6
1,565,373	+		Sama_1275	0.77	+0.7
1,565,374	-		Sama_1275	0.77	+1.2
1,565,374	-		Sama_1275	0.77	-0.1
1,565,374	-		Sama_1275	0.77	+2.0
1,565,374	-		Sama_1275	0.77	+0.7
1,565,374	-		Sama_1275	0.77	+0.0
1,565,436	-		Sama_1275	0.80	+2.9
1,565,436	-		Sama_1275	0.80	+1.4
1,565,436	-		Sama_1275	0.80	+0.2
1,565,458	+		Sama_1275	0.81	-2.7
1,565,461	+		Sama_1275	0.81	-1.4
1,565,461	+		Sama_1275	0.81	+0.2
1,565,462	-		Sama_1275	0.81	-2.2
1,565,462	-		Sama_1275	0.81	+0.7
1,565,462	-		Sama_1275	0.81	-0.5
1,565,559	+		Sama_1275	0.86	-1.1
1,565,576	-		Sama_1275	0.86	-0.3
1,565,595	+		Sama_1275	0.87	-0.4
1,565,595	+		Sama_1275	0.87	+2.5
1,565,596	-		Sama_1275	0.87	-1.6
1,565,623	+		Sama_1275	0.89	-0.7
1,565,623	+		Sama_1275	0.89	+1.6
1,565,624	-		Sama_1275	0.89	-1.5
1,565,624	-		Sama_1275	0.89	+1.0
1,565,629	+		Sama_1275	0.89	-1.2
1,565,629	+		Sama_1275	0.89	-1.7
1,565,629	+		Sama_1275	0.89	+1.8
1,565,629	+		Sama_1275	0.89	-0.3
1,565,629	+		Sama_1275	0.89	+0.8
1,565,629	+		Sama_1275	0.89	-0.8
1,565,630	-		Sama_1275	0.89	-1.0
1,565,630	-		Sama_1275	0.89	+0.4
1,565,644	+		Sama_1275	0.90	+0.6
1,565,644	+		Sama_1275	0.90	-0.8
1,565,645	-		Sama_1275	0.90	-2.1
1,565,645	-		Sama_1275	0.90	+0.6
1,565,645	-		Sama_1275	0.90	-0.6
1,565,645	-		Sama_1275	0.90	-1.3
1,565,647	+		Sama_1275	0.90	-0.3
1,565,647	+		Sama_1275	0.90	-0.3
1,565,647	+		Sama_1275	0.90	-2.1
1,565,647	+		Sama_1275	0.90	-0.3
1,565,647	+		Sama_1275	0.90	+1.6
1,565,647	+		Sama_1275	0.90	-1.0
1,565,648	-		Sama_1275	0.90	-3.0
1,565,648	-		Sama_1275	0.90	-0.7
1,565,648	-		Sama_1275	0.90	+1.2
1,565,648	-		Sama_1275	0.90	+0.7
1,565,658	+				-0.1
1,565,677	+				+0.4
1,565,678	-				-0.7
1,565,678	-				-2.0
1,565,678	-				+0.1
1,565,726	+				-3.8
1,565,727	-				-2.4
1,565,727	-				+1.8
1,565,788	+				-0.8
1,565,789	-				+1.4
1,565,817	+				-2.5
1,565,877	+				+0.4
1,565,877	+				+3.1
1,565,912	+				-0.4
1,565,912	+				-0.3
1,565,912	+				-0.9
1,565,912	+				+1.0
1,565,913	-				+0.2
1,565,913	-				+3.3
1,565,921	+				+1.1
1,565,921	+				+0.5
1,565,922	-				+2.9
1,565,922	-				+0.6
1,565,922	-				-0.8
1,565,962	+	nrdG	Sama_1276	0.11	+1.1
1,565,963	-	nrdG	Sama_1276	0.11	-1.7
1,565,963	-	nrdG	Sama_1276	0.11	-0.3
1,565,963	-	nrdG	Sama_1276	0.11	-0.5
1,566,006	-	nrdG	Sama_1276	0.20	+0.3
1,566,070	-	nrdG	Sama_1276	0.33	-1.0
1,566,112	+	nrdG	Sama_1276	0.41	+1.2
1,566,112	+	nrdG	Sama_1276	0.41	-1.3
1,566,206	-	nrdG	Sama_1276	0.60	-2.2
1,566,225	-	nrdG	Sama_1276	0.64	+1.7
1,566,325	+	nrdG	Sama_1276	0.84	-2.3
1,566,326	-	nrdG	Sama_1276	0.84	+0.2
1,566,352	+	nrdG	Sama_1276	0.90	-1.0
1,566,352	+	nrdG	Sama_1276	0.90	-3.1
1,566,353	-	nrdG	Sama_1276	0.90	+1.3
1,566,353	-	nrdG	Sama_1276	0.90	-0.7
1,566,381	+				-1.8
1,566,493	+				-0.1
1,566,494	-				-0.1
1,566,498	+				-0.3
1,566,498	+				-1.3
1,566,498	+				-2.0
1,566,498	+				-2.3
1,566,498	+				+2.3
1,566,498	+				-0.4
1,566,499	-				+0.3
1,566,499	-				+0.9
1,566,512	+				-2.7
1,566,558	+				+1.3
1,566,558	+				-0.7
1,566,563	+				-1.5
1,566,581	+				+0.2
1,566,581	+				-2.1
1,566,586	+				-2.0
1,566,644	+				-1.2