Strain Fitness in Shewanella amazonensis SB2B around Sama_1118

Experiment: L-Histidine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Histidine (N)
1,367,423	+		Sama_1116	0.71	+2.0
1,367,424	-		Sama_1116	0.71	-0.1
1,367,424	-		Sama_1116	0.71	+1.0
1,367,424	-		Sama_1116	0.71	+0.6
1,367,424	-		Sama_1116	0.71	+2.5
1,367,526	+		Sama_1116	0.84	-0.0
1,367,526	+		Sama_1116	0.84	+1.9
1,367,527	-		Sama_1116	0.84	+1.3
1,367,527	-		Sama_1116	0.84	-1.8
1,367,646	+				-0.9
1,367,681	+				+0.2
1,367,682	-				+0.7
1,367,682	-				-1.1
1,367,706	-				+0.1
1,367,783	-				+1.0
1,367,850	-				+1.1
1,367,869	+				-0.4
1,367,869	+				+0.7
1,367,869	+				-0.0
1,367,900	-				+1.8
1,367,916	-				-0.5
1,367,948	+				-0.9
1,367,948	+				-1.6
1,367,949	-				-1.0
1,367,956	+				-2.7
1,367,956	+				-0.6
1,367,978	+				-1.3
1,368,001	+		Sama_1117	0.14	-0.5
1,368,002	-		Sama_1117	0.15	-3.4
1,368,014	+		Sama_1117	0.18	-2.2
1,368,015	-		Sama_1117	0.18	-1.5
1,368,162	+		Sama_1117	0.59	+0.1
1,368,215	+		Sama_1117	0.74	+1.6
1,368,215	+		Sama_1117	0.74	-0.5
1,368,215	+		Sama_1117	0.74	-0.9
1,368,215	+		Sama_1117	0.74	-1.5
1,368,216	-		Sama_1117	0.74	-1.3
1,368,216	-		Sama_1117	0.74	+3.3
1,368,216	-		Sama_1117	0.74	+2.0
1,368,218	+		Sama_1117	0.75	-2.3
1,368,224	+		Sama_1117	0.76	-0.7
1,368,225	-		Sama_1117	0.77	-3.0
1,368,225	-		Sama_1117	0.77	-0.8
1,368,261	+		Sama_1117	0.87	+0.8
1,368,261	+		Sama_1117	0.87	+1.9
1,368,261	+		Sama_1117	0.87	-0.1
1,368,261	+		Sama_1117	0.87	-1.1
1,368,261	+		Sama_1117	0.87	-0.4
1,368,262	-		Sama_1117	0.87	+1.9
1,368,262	-		Sama_1117	0.87	+0.5
1,368,285	-				+2.6
1,368,306	+				-1.2
1,368,306	+				+0.5
1,368,307	-				-0.9
1,368,307	-				-0.0
1,368,314	+				+0.9
1,368,315	-				+1.1
1,368,377	+				+0.3
1,368,377	+				+1.7
1,368,377	+				+4.1
1,368,378	-				-0.7
1,368,378	-				+0.8
1,368,378	-				+0.9
1,368,380	-				+3.6
1,368,398	+				+0.0
1,368,398	+				-2.0
1,368,399	-				-0.0
1,368,399	-				+1.9
1,368,399	-				+0.1
1,368,486	-				+0.4
1,368,529	+				-0.6
1,368,529	+				+1.0
1,368,530	-				+0.6
1,368,530	-				-2.6
1,368,602	+				-1.0
1,368,602	+				-2.0
1,368,602	+				-3.6
1,368,603	-				-0.2
1,368,603	-				+3.9
1,368,603	-				-1.6
1,368,603	-				+0.1
1,368,603	-				+3.8
1,368,603	-				-0.6
1,368,603	-				+1.1
1,368,603	-				-0.9
1,368,629	-		Sama_1118	0.10	+0.3
1,368,629	-		Sama_1118	0.10	-0.7
1,368,656	+		Sama_1118	0.11	-2.0
1,368,662	+		Sama_1118	0.12	-0.1
1,368,663	-		Sama_1118	0.12	-0.5
1,368,700	+		Sama_1118	0.14	-0.2
1,368,700	+		Sama_1118	0.14	+1.4
1,368,701	-		Sama_1118	0.14	+1.5
1,368,715	+		Sama_1118	0.14	-1.3
1,368,725	-		Sama_1118	0.15	-0.5
1,368,755	-		Sama_1118	0.16	+0.1
1,368,765	-		Sama_1118	0.17	-0.8
1,368,812	+		Sama_1118	0.19	-0.0
1,368,812	+		Sama_1118	0.19	+3.4
1,368,812	+		Sama_1118	0.19	+1.6
1,368,812	+		Sama_1118	0.19	+0.5
1,368,812	+		Sama_1118	0.19	+3.3
1,368,812	+		Sama_1118	0.19	-1.0
1,368,812	+		Sama_1118	0.19	+0.3
1,368,812	+		Sama_1118	0.19	+3.1
1,368,813	-		Sama_1118	0.19	-0.9
1,368,813	-		Sama_1118	0.19	+0.9
1,368,813	-		Sama_1118	0.19	-1.7
1,368,813	-		Sama_1118	0.19	+0.1
1,368,846	-		Sama_1118	0.21	-1.7
1,368,860	+		Sama_1118	0.21	+0.3
1,368,861	-		Sama_1118	0.21	-0.6
1,368,945	+		Sama_1118	0.25	-0.9
1,368,945	+		Sama_1118	0.25	-0.8
1,368,946	-		Sama_1118	0.26	-1.6
1,368,946	-		Sama_1118	0.26	+1.2
1,369,054	-		Sama_1118	0.31	-0.1
1,369,136	+		Sama_1118	0.35	+0.9
1,369,136	+		Sama_1118	0.35	-1.9
1,369,136	+		Sama_1118	0.35	-0.1
1,369,136	+		Sama_1118	0.35	-0.7
1,369,136	+		Sama_1118	0.35	+1.3
1,369,145	+		Sama_1118	0.35	-0.5
1,369,196	+		Sama_1118	0.38	+0.3
1,369,196	+		Sama_1118	0.38	-0.8
1,369,197	-		Sama_1118	0.38	-1.9
1,369,197	-		Sama_1118	0.38	-2.3
1,369,238	+		Sama_1118	0.40	+0.9
1,369,238	+		Sama_1118	0.40	-2.0
1,369,327	+		Sama_1118	0.44	-0.5
1,369,327	+		Sama_1118	0.44	-1.7
1,369,327	+		Sama_1118	0.44	-0.5
1,369,327	+		Sama_1118	0.44	-0.0
1,369,327	+		Sama_1118	0.44	+0.1
1,369,328	-		Sama_1118	0.44	-2.0
1,369,328	-		Sama_1118	0.44	+0.0
1,369,328	-		Sama_1118	0.44	+1.3
1,369,328	-		Sama_1118	0.44	+0.9
1,369,328	-		Sama_1118	0.44	-1.5
1,369,328	-		Sama_1118	0.44	-1.5
1,369,335	+		Sama_1118	0.45	-2.7
1,369,335	+		Sama_1118	0.45	-0.2
1,369,336	-		Sama_1118	0.45	+0.6
1,369,400	+		Sama_1118	0.48	-1.9
1,369,439	+		Sama_1118	0.50	+0.6
1,369,439	+		Sama_1118	0.50	+0.4
1,369,440	-		Sama_1118	0.50	+0.9
1,369,471	+		Sama_1118	0.51	+0.6
1,369,471	+		Sama_1118	0.51	-1.2
1,369,472	-		Sama_1118	0.51	-1.5
1,369,824	+		Sama_1118	0.68	-0.7
1,369,841	+		Sama_1118	0.69	-2.1
1,369,841	+		Sama_1118	0.69	+0.1
1,369,842	-		Sama_1118	0.69	-2.0
1,369,963	+		Sama_1118	0.75	-0.8
1,369,963	+		Sama_1118	0.75	-1.7
1,369,963	+		Sama_1118	0.75	+1.8
1,369,963	+		Sama_1118	0.75	-1.3
1,369,963	+		Sama_1118	0.75	+1.6
1,369,964	-		Sama_1118	0.75	-2.5
1,369,991	+		Sama_1118	0.77	-2.1
1,369,992	-		Sama_1118	0.77	-2.0
1,370,088	-		Sama_1118	0.81	+1.3
1,370,148	+		Sama_1118	0.84	+0.5
1,370,148	+		Sama_1118	0.84	+0.2
1,370,148	+		Sama_1118	0.84	-1.0
1,370,148	+		Sama_1118	0.84	-1.0
1,370,149	-		Sama_1118	0.84	-0.2
1,370,149	-		Sama_1118	0.84	+3.0
1,370,149	-		Sama_1118	0.84	+0.3
1,370,149	-		Sama_1118	0.84	-1.3
1,370,234	+		Sama_1118	0.88	-2.1
1,370,234	+		Sama_1118	0.88	-1.6
1,370,235	-		Sama_1118	0.88	+0.3
1,370,235	-		Sama_1118	0.88	-2.9
1,370,235	-		Sama_1118	0.88	+3.5
1,370,236	+		Sama_1118	0.88	+1.4
1,370,302	+				-2.1
1,370,303	-				+2.7
1,370,308	+				+0.8
1,370,309	-				-0.9
1,370,357	+				-0.7
1,370,357	+				+0.3
1,370,392	+				-0.7
1,370,447	+				-1.1
1,370,452	+				-1.3
1,370,452	+				-1.1
1,370,453	-				+0.2
1,370,453	-				-0.2
1,370,453	-				+0.3
1,370,469	+				-0.2
1,370,469	+				+4.6
1,370,470	-				-2.1
1,370,496	-				-0.9
1,370,556	-				-1.1
1,370,573	-				-0.2
1,370,632	+				+2.2
1,370,644	+				-1.2
1,370,645	-				-2.0
1,370,684	+				-1.9
1,370,684	+				+2.5
1,370,684	+				-1.5
1,370,685	-				+0.3
1,370,685	-				-1.2
1,370,685	-				+0.0
1,370,685	-				+0.3
1,370,701	+				+0.8
1,370,727	+				-1.3
1,370,762	-				-1.7
1,370,921	+		Sama_1119	0.22	+0.9
1,370,922	-		Sama_1119	0.22	+0.5
1,371,057	-		Sama_1119	0.38	+1.8
1,371,086	+		Sama_1119	0.41	+1.7
1,371,112	-		Sama_1119	0.44	+1.2
1,371,113	+		Sama_1119	0.44	+4.0
1,371,113	+		Sama_1119	0.44	-0.4
1,371,113	+		Sama_1119	0.44	-0.2
1,371,127	-		Sama_1119	0.46	+1.8
1,371,142	+		Sama_1119	0.48	-0.7
1,371,142	+		Sama_1119	0.48	-0.5
1,371,142	+		Sama_1119	0.48	-2.2
1,371,150	-		Sama_1119	0.49	+1.4
1,371,189	+		Sama_1119	0.53	-0.4
1,371,213	+		Sama_1119	0.56	-1.3
1,371,213	+		Sama_1119	0.56	-0.2
1,371,214	-		Sama_1119	0.56	+1.8
1,371,282	+		Sama_1119	0.64	-0.1
1,371,282	+		Sama_1119	0.64	+3.3
1,371,282	+		Sama_1119	0.64	+1.2
1,371,282	+		Sama_1119	0.64	+1.1
1,371,282	+		Sama_1119	0.64	-2.7
1,371,283	-		Sama_1119	0.64	+0.3
1,371,283	-		Sama_1119	0.64	-1.4
1,371,283	-		Sama_1119	0.64	-1.2
1,371,283	-		Sama_1119	0.64	+0.5
1,371,284	+		Sama_1119	0.64	+2.5
1,371,285	-		Sama_1119	0.65	+0.6
1,371,374	+		Sama_1119	0.75	-0.8
1,371,374	+		Sama_1119	0.75	+3.2
1,371,385	-		Sama_1119	0.76	+0.9
1,371,455	+		Sama_1119	0.84	-2.0
1,371,457	+		Sama_1119	0.85	-0.4
1,371,457	+		Sama_1119	0.85	-1.2
1,371,457	+		Sama_1119	0.85	+1.8
1,371,458	-		Sama_1119	0.85	+4.3