Strain Fitness in Shewanella amazonensis SB2B around Sama_1045

Experiment: L-Histidine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Histidine (N)
1,261,724	-		Sama_1044	0.17	-1.8
1,261,724	-		Sama_1044	0.17	+2.6
1,261,774	+		Sama_1044	0.23	-1.4
1,261,816	-		Sama_1044	0.27	-1.9
1,261,826	+		Sama_1044	0.28	-1.0
1,261,826	+		Sama_1044	0.28	-1.0
1,261,826	+		Sama_1044	0.28	+1.2
1,261,826	+		Sama_1044	0.28	-1.9
1,261,826	+		Sama_1044	0.28	-0.0
1,261,899	+		Sama_1044	0.35	+1.7
1,261,975	+		Sama_1044	0.43	-2.5
1,261,975	+		Sama_1044	0.43	-1.9
1,261,975	+		Sama_1044	0.43	+0.2
1,261,975	+		Sama_1044	0.43	+1.4
1,261,976	-		Sama_1044	0.43	-0.7
1,262,074	+		Sama_1044	0.53	-1.9
1,262,075	-		Sama_1044	0.53	+2.8
1,262,104	-		Sama_1044	0.56	+0.3
1,262,175	+		Sama_1044	0.63	+4.5
1,262,175	+		Sama_1044	0.63	-2.1
1,262,176	-		Sama_1044	0.63	+0.7
1,262,236	-		Sama_1044	0.70	-2.0
1,262,252	+		Sama_1044	0.71	-1.3
1,262,252	+		Sama_1044	0.71	-2.0
1,262,252	+		Sama_1044	0.71	-0.7
1,262,252	+		Sama_1044	0.71	+1.3
1,262,253	-		Sama_1044	0.71	-0.0
1,262,253	-		Sama_1044	0.71	+0.0
1,262,253	-		Sama_1044	0.71	+4.1
1,262,255	+		Sama_1044	0.71	-0.3
1,262,256	-		Sama_1044	0.72	+0.3
1,262,284	+		Sama_1044	0.74	-0.4
1,262,284	+		Sama_1044	0.74	-0.0
1,262,284	+		Sama_1044	0.74	-1.0
1,262,284	+		Sama_1044	0.74	-1.3
1,262,284	+		Sama_1044	0.74	-2.0
1,262,284	+		Sama_1044	0.74	-2.9
1,262,285	-		Sama_1044	0.74	-0.1
1,262,285	-		Sama_1044	0.74	-1.9
1,262,285	-		Sama_1044	0.74	-0.1
1,262,285	-		Sama_1044	0.74	-1.6
1,262,285	-		Sama_1044	0.74	-1.3
1,262,286	+		Sama_1044	0.75	-0.2
1,262,286	+		Sama_1044	0.75	-2.1
1,262,286	+		Sama_1044	0.75	-1.8
1,262,286	+		Sama_1044	0.75	-1.1
1,262,286	+		Sama_1044	0.75	+1.0
1,262,286	+		Sama_1044	0.75	+0.5
1,262,286	+		Sama_1044	0.75	+0.7
1,262,286	+		Sama_1044	0.75	-2.4
1,262,286	+		Sama_1044	0.75	+2.8
1,262,286	+		Sama_1044	0.75	+1.0
1,262,287	-		Sama_1044	0.75	-0.1
1,262,287	-		Sama_1044	0.75	+1.2
1,262,287	-		Sama_1044	0.75	-1.7
1,262,287	-		Sama_1044	0.75	-1.7
1,262,287	-		Sama_1044	0.75	+0.4
1,262,287	-		Sama_1044	0.75	+0.1
1,262,291	+		Sama_1044	0.75	-1.8
1,262,291	+		Sama_1044	0.75	-1.4
1,262,291	+		Sama_1044	0.75	-1.4
1,262,291	+		Sama_1044	0.75	-1.3
1,262,292	-		Sama_1044	0.75	-2.4
1,262,292	-		Sama_1044	0.75	-1.0
1,262,292	-		Sama_1044	0.75	-0.0
1,262,292	-		Sama_1044	0.75	+0.7
1,262,306	+		Sama_1044	0.77	-0.2
1,262,306	+		Sama_1044	0.77	+0.0
1,262,306	+		Sama_1044	0.77	-1.0
1,262,307	-		Sama_1044	0.77	+0.4
1,262,307	-		Sama_1044	0.77	-0.7
1,262,307	-		Sama_1044	0.77	-1.2
1,262,307	-		Sama_1044	0.77	+1.7
1,262,307	-		Sama_1044	0.77	+2.2
1,262,307	-		Sama_1044	0.77	+0.5
1,262,310	+		Sama_1044	0.77	-0.6
1,262,310	+		Sama_1044	0.77	-1.2
1,262,310	+		Sama_1044	0.77	+1.4
1,262,311	-		Sama_1044	0.77	-1.2
1,262,343	+		Sama_1044	0.80	-1.0
1,262,343	+		Sama_1044	0.80	+0.2
1,262,389	+		Sama_1044	0.85	+0.2
1,262,390	-		Sama_1044	0.85	+0.3
1,262,447	+				+1.4
1,262,456	+				-0.7
1,262,456	+				-1.0
1,262,456	+				+2.8
1,262,462	+				-0.3
1,262,462	+				+0.9
1,262,462	+				-1.8
1,262,463	-				-1.9
1,262,533	+				-1.1
1,262,533	+				+1.0
1,262,533	+				+0.5
1,262,542	-				+0.3
1,262,584	+				-2.8
1,262,584	+				-0.2
1,262,585	-				-2.3
1,262,585	-				+0.2
1,262,617	+				+0.1
1,262,617	+				-1.3
1,262,618	-				-1.6
1,262,652	+				+0.4
1,262,653	-				+0.9
1,262,653	-				-1.3
1,262,657	+				-0.2
1,262,657	+				-0.1
1,262,658	-				+0.4
1,262,702	+				-1.3
1,262,703	-				+2.6
1,262,703	-				+2.8
1,262,703	-				-1.3
1,262,703	-				-1.1
1,262,717	+				-1.5
1,262,717	+				+0.4
1,262,717	+				-0.3
1,262,717	+				-0.6
1,262,718	-				-1.5
1,262,718	-				+1.8
1,262,718	-				+0.5
1,262,733	-				-1.9
1,262,761	+				-1.0
1,262,762	-				+0.8
1,262,762	-				+0.3
1,262,791	+				-0.2
1,262,892	+				-0.2
1,262,892	+				+4.8
1,262,893	-				-0.4
1,262,893	-				-0.0
1,262,918	+		Sama_1045	0.10	+0.2
1,262,919	-		Sama_1045	0.10	-0.9
1,262,930	-		Sama_1045	0.11	+0.6
1,262,930	-		Sama_1045	0.11	-0.7
1,262,930	-		Sama_1045	0.11	-1.6
1,262,930	-		Sama_1045	0.11	-1.6
1,262,938	+		Sama_1045	0.11	-0.4
1,262,939	-		Sama_1045	0.11	-1.1
1,263,018	+		Sama_1045	0.14	+0.4
1,263,032	+		Sama_1045	0.15	-1.7
1,263,032	+		Sama_1045	0.15	-0.7
1,263,032	+		Sama_1045	0.15	+1.1
1,263,033	-		Sama_1045	0.15	+1.2
1,263,033	-		Sama_1045	0.15	-0.8
1,263,063	+		Sama_1045	0.16	+0.3
1,263,063	+		Sama_1045	0.16	+3.6
1,263,063	+		Sama_1045	0.16	-1.8
1,263,064	-		Sama_1045	0.16	+0.1
1,263,064	-		Sama_1045	0.16	+0.6
1,263,091	+		Sama_1045	0.17	-1.4
1,263,091	+		Sama_1045	0.17	-1.3
1,263,092	-		Sama_1045	0.17	-0.0
1,263,092	-		Sama_1045	0.17	-0.9
1,263,092	-		Sama_1045	0.17	-2.9
1,263,092	-		Sama_1045	0.17	-1.7
1,263,092	-		Sama_1045	0.17	-0.0
1,263,099	+		Sama_1045	0.17	-1.3
1,263,099	+		Sama_1045	0.17	+0.4
1,263,099	+		Sama_1045	0.17	-0.2
1,263,099	+		Sama_1045	0.17	-0.0
1,263,099	+		Sama_1045	0.17	+0.8
1,263,099	+		Sama_1045	0.17	+0.7
1,263,099	+		Sama_1045	0.17	+0.8
1,263,099	+		Sama_1045	0.17	-1.2
1,263,099	+		Sama_1045	0.17	-0.9
1,263,099	+		Sama_1045	0.17	+2.4
1,263,099	+		Sama_1045	0.17	-0.2
1,263,099	+		Sama_1045	0.17	+0.5
1,263,099	+		Sama_1045	0.17	-0.5
1,263,100	-		Sama_1045	0.18	-1.4
1,263,100	-		Sama_1045	0.18	+0.9
1,263,100	-		Sama_1045	0.18	-1.1
1,263,100	-		Sama_1045	0.18	-1.4
1,263,100	-		Sama_1045	0.18	-1.5
1,263,100	-		Sama_1045	0.18	+1.0
1,263,100	-		Sama_1045	0.18	-0.6
1,263,100	-		Sama_1045	0.18	-1.6
1,263,109	+		Sama_1045	0.18	+0.1
1,263,193	+		Sama_1045	0.21	+2.2
1,263,193	+		Sama_1045	0.21	+0.3
1,263,241	+		Sama_1045	0.23	+0.4
1,263,245	+		Sama_1045	0.23	+1.8
1,263,246	-		Sama_1045	0.23	-0.6
1,263,246	-		Sama_1045	0.23	+1.3
1,263,298	+		Sama_1045	0.25	-1.1
1,263,313	+		Sama_1045	0.26	-1.8
1,263,334	+		Sama_1045	0.27	+0.9
1,263,334	+		Sama_1045	0.27	-0.3
1,263,334	+		Sama_1045	0.27	-1.3
1,263,334	+		Sama_1045	0.27	-2.5
1,263,334	+		Sama_1045	0.27	-1.0
1,263,334	+		Sama_1045	0.27	-2.8
1,263,334	+		Sama_1045	0.27	+0.2
1,263,334	+		Sama_1045	0.27	+2.1
1,263,334	+		Sama_1045	0.27	-0.6
1,263,335	-		Sama_1045	0.27	+0.4
1,263,335	-		Sama_1045	0.27	+0.4
1,263,335	-		Sama_1045	0.27	-0.1
1,263,335	-		Sama_1045	0.27	+2.0
1,263,335	-		Sama_1045	0.27	+0.2
1,263,335	-		Sama_1045	0.27	-0.6
1,263,336	+		Sama_1045	0.27	-2.2
1,263,336	+		Sama_1045	0.27	+1.5
1,263,336	+		Sama_1045	0.27	+0.1
1,263,336	+		Sama_1045	0.27	-3.6
1,263,336	+		Sama_1045	0.27	-2.8
1,263,336	+		Sama_1045	0.27	-1.4
1,263,336	+		Sama_1045	0.27	+2.1
1,263,336	+		Sama_1045	0.27	+3.2
1,263,337	-		Sama_1045	0.27	-1.0
1,263,337	-		Sama_1045	0.27	+2.0
1,263,337	-		Sama_1045	0.27	-1.9
1,263,337	-		Sama_1045	0.27	+2.4
1,263,337	-		Sama_1045	0.27	-0.7
1,263,337	-		Sama_1045	0.27	+2.2
1,263,337	-		Sama_1045	0.27	-2.0
1,263,337	-		Sama_1045	0.27	-0.1
1,263,346	+		Sama_1045	0.27	-0.9
1,263,347	-		Sama_1045	0.27	-2.3
1,263,395	+		Sama_1045	0.29	-1.5
1,263,395	+		Sama_1045	0.29	+2.0
1,263,410	-		Sama_1045	0.30	+1.3
1,263,504	+		Sama_1045	0.33	-1.0
1,263,504	+		Sama_1045	0.33	-2.4
1,263,504	+		Sama_1045	0.33	-1.9
1,263,504	+		Sama_1045	0.33	-1.3
1,263,505	-		Sama_1045	0.33	+1.4
1,263,505	-		Sama_1045	0.33	-1.9
1,263,679	-		Sama_1045	0.40	-1.3
1,263,700	+		Sama_1045	0.41	+2.5
1,263,700	+		Sama_1045	0.41	-0.8
1,263,700	+		Sama_1045	0.41	-1.5
1,263,701	-		Sama_1045	0.41	-1.0
1,263,701	-		Sama_1045	0.41	+1.3
1,263,702	+		Sama_1045	0.41	-1.8
1,263,702	+		Sama_1045	0.41	-0.7
1,263,703	-		Sama_1045	0.41	-1.1
1,263,703	-		Sama_1045	0.41	+0.2
1,263,703	-		Sama_1045	0.41	+1.2
1,263,703	-		Sama_1045	0.41	-1.6
1,263,718	+		Sama_1045	0.42	+3.4
1,263,783	+		Sama_1045	0.44	+3.3
1,263,783	+		Sama_1045	0.44	-1.1
1,263,784	-		Sama_1045	0.44	-1.2
1,263,794	+		Sama_1045	0.45	-0.9
1,263,795	-		Sama_1045	0.45	+1.2
1,263,868	-		Sama_1045	0.47	-0.6
1,263,872	+		Sama_1045	0.48	-3.1
1,263,872	+		Sama_1045	0.48	-1.3
1,263,872	+		Sama_1045	0.48	+1.2
1,263,873	-		Sama_1045	0.48	-2.2
1,263,873	-		Sama_1045	0.48	-0.7
1,263,873	-		Sama_1045	0.48	-1.8
1,263,918	+		Sama_1045	0.49	-1.0
1,263,918	+		Sama_1045	0.49	-0.3
1,263,953	+		Sama_1045	0.51	-2.7
1,263,971	+		Sama_1045	0.51	+1.0
1,263,971	+		Sama_1045	0.51	+0.3
1,263,993	+		Sama_1045	0.52	-2.0
1,263,993	+		Sama_1045	0.52	-0.3
1,263,994	-		Sama_1045	0.52	-0.2
1,263,994	-		Sama_1045	0.52	+0.3
1,263,994	-		Sama_1045	0.52	+1.7
1,264,058	+		Sama_1045	0.55	-0.2
1,264,059	-		Sama_1045	0.55	+1.8
1,264,153	+		Sama_1045	0.59	+2.9
1,264,154	-		Sama_1045	0.59	-1.1
1,264,154	-		Sama_1045	0.59	+4.2
1,264,160	+		Sama_1045	0.59	-2.1
1,264,160	+		Sama_1045	0.59	-0.9
1,264,160	+		Sama_1045	0.59	-0.0
1,264,160	+		Sama_1045	0.59	-0.7
1,264,160	+		Sama_1045	0.59	-0.9
1,264,160	+		Sama_1045	0.59	-1.9
1,264,160	+		Sama_1045	0.59	-1.2
1,264,160	+		Sama_1045	0.59	-0.6
1,264,160	+		Sama_1045	0.59	+0.7
1,264,160	+		Sama_1045	0.59	-1.0
1,264,161	-		Sama_1045	0.59	+1.3
1,264,161	-		Sama_1045	0.59	+0.4
1,264,161	-		Sama_1045	0.59	+1.4
1,264,161	-		Sama_1045	0.59	-0.9
1,264,178	-		Sama_1045	0.60	+0.3
1,264,178	-		Sama_1045	0.60	+1.1
1,264,200	+		Sama_1045	0.60	+0.4
1,264,201	-		Sama_1045	0.60	-0.4
1,264,201	-		Sama_1045	0.60	+1.9
1,264,218	-		Sama_1045	0.61	+0.5
1,264,252	+		Sama_1045	0.62	+0.3
1,264,252	+		Sama_1045	0.62	+3.2
1,264,294	+		Sama_1045	0.64	-0.6
1,264,294	+		Sama_1045	0.64	-2.2
1,264,295	-		Sama_1045	0.64	-0.8
1,264,318	+		Sama_1045	0.65	+0.8
1,264,319	-		Sama_1045	0.65	+0.6
1,264,321	+		Sama_1045	0.65	-0.7
1,264,322	-		Sama_1045	0.65	+1.6
1,264,328	+		Sama_1045	0.65	-2.8
1,264,328	+		Sama_1045	0.65	+1.9
1,264,372	+		Sama_1045	0.67	+1.3
1,264,372	+		Sama_1045	0.67	-0.5
1,264,373	-		Sama_1045	0.67	+1.8
1,264,373	-		Sama_1045	0.67	+0.9
1,264,373	-		Sama_1045	0.67	-1.6
1,264,373	-		Sama_1045	0.67	-2.1
1,264,373	-		Sama_1045	0.67	-1.0
1,264,384	+		Sama_1045	0.68	+1.0
1,264,384	+		Sama_1045	0.68	+1.8
1,264,384	+		Sama_1045	0.68	-0.6
1,264,385	-		Sama_1045	0.68	-1.4
1,264,385	-		Sama_1045	0.68	-0.1
1,264,385	-		Sama_1045	0.68	-1.8
1,264,433	+		Sama_1045	0.69	+0.6
1,264,433	+		Sama_1045	0.69	-0.7
1,264,434	-		Sama_1045	0.70	-1.2
1,264,474	-		Sama_1045	0.71	+0.8
1,264,482	+		Sama_1045	0.71	-2.1
1,264,483	-		Sama_1045	0.71	+2.4
1,264,483	-		Sama_1045	0.71	-1.8
1,264,483	-		Sama_1045	0.71	+0.8
1,264,483	-		Sama_1045	0.71	+3.1
1,264,483	-		Sama_1045	0.71	+0.1
1,264,483	-		Sama_1045	0.71	-0.8
1,264,483	-		Sama_1045	0.71	+0.2
1,264,588	+		Sama_1045	0.76	-0.0
1,264,588	+		Sama_1045	0.76	+1.2
1,264,589	-		Sama_1045	0.76	+2.3
1,264,589	-		Sama_1045	0.76	-2.2
1,264,589	-		Sama_1045	0.76	+2.3
1,264,634	-		Sama_1045	0.77	+1.7
1,264,634	-		Sama_1045	0.77	-2.0
1,264,640	-		Sama_1045	0.78	+0.4
1,264,640	-		Sama_1045	0.78	+0.3
1,264,640	-		Sama_1045	0.78	-0.3
1,264,671	+		Sama_1045	0.79	+1.4
1,264,671	+		Sama_1045	0.79	+1.6
1,264,671	+		Sama_1045	0.79	+0.6
1,264,671	+		Sama_1045	0.79	-1.6
1,264,672	-		Sama_1045	0.79	-0.4
1,264,672	-		Sama_1045	0.79	+0.2
1,264,672	-		Sama_1045	0.79	+0.8
1,264,672	-		Sama_1045	0.79	+0.2
1,264,672	-		Sama_1045	0.79	-1.3
1,264,672	-		Sama_1045	0.79	+5.1
1,264,672	-		Sama_1045	0.79	-2.0
1,264,672	-		Sama_1045	0.79	+0.2
1,264,672	-		Sama_1045	0.79	-0.4
1,264,672	-		Sama_1045	0.79	-0.7
1,264,760	+		Sama_1045	0.82	-0.1
1,264,760	+		Sama_1045	0.82	+2.0
1,264,760	+		Sama_1045	0.82	-1.9
1,264,761	-		Sama_1045	0.82	-0.8
1,264,852	+		Sama_1045	0.86	+3.0
1,264,922	+		Sama_1045	0.89	+1.8
1,264,974	+				-2.7
1,264,975	-				+1.0
1,265,089	-				+3.0
1,265,089	-				+1.0
1,265,089	-				+0.1
1,265,089	-				-3.2
1,265,100	+				+3.3
1,265,101	-				-1.1
1,265,101	-				+2.2
1,265,101	-				+1.4
1,265,118	+				-2.3
1,265,131	+				-0.4
1,265,131	+				-0.6
1,265,160	+				-3.5
1,265,161	-				+3.3
1,265,161	-				-0.6
1,265,161	-				+1.0
1,265,179	+				+1.2
1,265,180	-				-0.2
1,265,259	+				-1.3
1,265,273	-				+1.2
1,265,295	-				+0.2
1,265,375	+				+4.4
1,265,375	+				+0.2
1,265,375	+				-0.4
1,265,376	-				-1.4
1,265,405	+				+0.8
1,265,407	+				-1.6
1,265,420	+				+1.8
1,265,420	+				-0.4
1,265,430	+				-0.8
1,265,430	+				+1.9
1,265,430	+				-1.9
1,265,430	+				-2.5
1,265,430	+				+0.6
1,265,430	+				-0.4
1,265,431	-				-2.0
1,265,431	-				-1.7
1,265,457	+				-0.0
1,265,519	+				-1.0
1,265,520	-				-1.2
1,265,718	-	recA	Sama_1046	0.20	-0.6
1,265,809	+	recA	Sama_1046	0.29	-0.2
1,265,809	+	recA	Sama_1046	0.29	-0.2
1,265,809	+	recA	Sama_1046	0.29	-2.2
1,265,809	+	recA	Sama_1046	0.29	-1.1
1,265,809	+	recA	Sama_1046	0.29	+2.1
1,265,809	+	recA	Sama_1046	0.29	+0.4
1,265,809	+	recA	Sama_1046	0.29	-1.4
1,265,810	-	recA	Sama_1046	0.29	-0.8
1,265,810	-	recA	Sama_1046	0.29	+0.8
1,265,810	-	recA	Sama_1046	0.29	+2.8
1,265,811	+	recA	Sama_1046	0.29	+0.9
1,265,811	+	recA	Sama_1046	0.29	-0.5
1,265,812	-	recA	Sama_1046	0.29	-0.4
1,265,812	-	recA	Sama_1046	0.29	-1.6
1,265,830	+	recA	Sama_1046	0.31	-1.6
1,265,830	+	recA	Sama_1046	0.31	+1.6
1,265,830	+	recA	Sama_1046	0.31	-0.2
1,265,831	-	recA	Sama_1046	0.31	-0.1
1,265,841	-	recA	Sama_1046	0.32	-2.9
1,265,995	+	recA	Sama_1046	0.46	+1.5
1,266,010	+	recA	Sama_1046	0.48	-1.6
1,266,032	+	recA	Sama_1046	0.50	-1.1
1,266,032	+	recA	Sama_1046	0.50	-1.1
1,266,032	+	recA	Sama_1046	0.50	+1.4