Strain Fitness in Shewanella amazonensis SB2B around Sama_0899

Experiment: L-Histidine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Histidine (N)
1,087,412	-		Sama_0898	0.65	-0.9
1,087,422	-		Sama_0898	0.66	-2.0
1,087,480	+		Sama_0898	0.69	-1.5
1,087,480	+		Sama_0898	0.69	-1.1
1,087,480	+		Sama_0898	0.69	-1.4
1,087,481	-		Sama_0898	0.69	-1.0
1,087,481	-		Sama_0898	0.69	-2.4
1,087,591	+		Sama_0898	0.74	-2.3
1,087,591	+		Sama_0898	0.74	-1.5
1,087,591	+		Sama_0898	0.74	-2.7
1,087,592	-		Sama_0898	0.74	-2.1
1,087,592	-		Sama_0898	0.74	-2.1
1,087,592	-		Sama_0898	0.74	-3.0
1,087,592	-		Sama_0898	0.74	-3.0
1,087,592	-		Sama_0898	0.74	-3.8
1,087,592	-		Sama_0898	0.74	-0.6
1,087,592	-		Sama_0898	0.74	-1.6
1,087,592	-		Sama_0898	0.74	-1.8
1,087,592	-		Sama_0898	0.74	+3.2
1,087,674	+		Sama_0898	0.78	-1.9
1,087,674	+		Sama_0898	0.78	-1.2
1,087,675	-		Sama_0898	0.78	-0.7
1,087,713	+		Sama_0898	0.80	-3.3
1,087,714	-		Sama_0898	0.80	-1.3
1,087,714	-		Sama_0898	0.80	-3.5
1,087,750	+		Sama_0898	0.82	-2.6
1,087,750	+		Sama_0898	0.82	+0.2
1,087,751	-		Sama_0898	0.82	-2.1
1,087,751	-		Sama_0898	0.82	+3.6
1,087,756	+		Sama_0898	0.82	-1.1
1,087,756	+		Sama_0898	0.82	-0.0
1,087,756	+		Sama_0898	0.82	-3.6
1,087,756	+		Sama_0898	0.82	-2.1
1,087,756	+		Sama_0898	0.82	-2.5
1,087,756	+		Sama_0898	0.82	-3.7
1,087,757	-		Sama_0898	0.83	-1.8
1,087,757	-		Sama_0898	0.83	-2.0
1,087,777	+		Sama_0898	0.84	-1.8
1,087,777	+		Sama_0898	0.84	-2.0
1,087,778	-		Sama_0898	0.84	-0.2
1,087,778	-		Sama_0898	0.84	-2.8
1,087,789	+		Sama_0898	0.84	-2.3
1,087,789	+		Sama_0898	0.84	-2.4
1,087,789	+		Sama_0898	0.84	-1.1
1,087,789	+		Sama_0898	0.84	-0.6
1,087,789	+		Sama_0898	0.84	-2.6
1,087,789	+		Sama_0898	0.84	-3.1
1,087,790	-		Sama_0898	0.84	-1.6
1,087,790	-		Sama_0898	0.84	-1.6
1,087,790	-		Sama_0898	0.84	-2.2
1,087,790	-		Sama_0898	0.84	-4.5
1,087,790	-		Sama_0898	0.84	-3.1
1,087,831	+		Sama_0898	0.86	-2.3
1,087,831	+		Sama_0898	0.86	-1.1
1,087,831	+		Sama_0898	0.86	-2.1
1,087,831	+		Sama_0898	0.86	-3.8
1,087,832	-		Sama_0898	0.86	-3.1
1,087,874	-		Sama_0898	0.88	-0.4
1,087,875	+		Sama_0898	0.88	-1.6
1,087,875	+		Sama_0898	0.88	-2.0
1,087,875	+		Sama_0898	0.88	-2.3
1,087,875	+		Sama_0898	0.88	-1.6
1,087,875	+		Sama_0898	0.88	-2.6
1,087,875	+		Sama_0898	0.88	-2.7
1,087,876	-		Sama_0898	0.89	-0.0
1,087,876	-		Sama_0898	0.89	-2.2
1,087,876	-		Sama_0898	0.89	-0.7
1,087,876	-		Sama_0898	0.89	-1.6
1,087,876	-		Sama_0898	0.89	-0.9
1,087,876	-		Sama_0898	0.89	-0.7
1,087,883	+		Sama_0898	0.89	-1.9
1,087,884	-		Sama_0898	0.89	-3.2
1,087,988	+				-2.3
1,088,118	+				-2.2
1,088,121	+				-1.3
1,088,121	+				-1.8
1,088,121	+				-1.6
1,088,121	+				-0.0
1,088,121	+				-3.8
1,088,122	-				-0.6
1,088,122	-				-0.0
1,088,134	+				-2.0
1,088,134	+				-1.7
1,088,190	-				-0.4
1,088,235	+				-1.9
1,088,235	+				-3.7
1,088,268	+				-3.9
1,088,268	+				-2.1
1,088,268	+				-3.3
1,088,269	-				+0.1
1,088,313	+				-1.4
1,088,313	+				+0.6
1,088,313	+				-0.4
1,088,313	+				+0.9
1,088,314	-				+0.5
1,088,314	-				-1.6
1,088,327	+				-0.0
1,088,381	+				-1.1
1,088,381	+				-0.3
1,088,381	+				-0.6
1,088,382	-				-1.3
1,088,382	-				+0.7
1,088,382	-				+1.8
1,088,382	-				-0.6
1,088,393	+				-0.8
1,088,393	+				+2.3
1,088,393	+				-2.2
1,088,394	-				-0.9
1,088,394	-				+0.3
1,088,520	-		Sama_0899	0.42	-2.8
1,088,549	-		Sama_0899	0.50	-1.9
1,088,549	-		Sama_0899	0.50	+0.7
1,088,616	+		Sama_0899	0.69	-1.0
1,088,616	+		Sama_0899	0.69	-2.2
1,088,616	+		Sama_0899	0.69	-3.0
1,088,616	+		Sama_0899	0.69	+0.6
1,088,617	-		Sama_0899	0.69	-0.6
1,088,617	-		Sama_0899	0.69	+1.4
1,088,617	-		Sama_0899	0.69	+2.1
1,088,617	-		Sama_0899	0.69	-1.1
1,088,617	-		Sama_0899	0.69	+0.3
1,088,617	-		Sama_0899	0.69	-1.1
1,088,617	-		Sama_0899	0.69	+1.1
1,088,617	-		Sama_0899	0.69	-1.6
1,088,617	-		Sama_0899	0.69	-0.6
1,088,686	-		Sama_0899	0.88	-3.1
1,088,691	+		Sama_0899	0.90	-1.4
1,088,691	+		Sama_0899	0.90	-0.2
1,088,692	-				-2.8
1,088,692	-				-1.8
1,088,692	-				-2.0
1,088,692	-				-1.4
1,088,696	-				-1.8
1,088,727	+				-0.2
1,088,727	+				-1.0
1,088,728	-				-2.0
1,088,806	+				-2.1
1,088,807	-				-2.5
1,088,807	-				+1.7
1,088,834	-				-0.8
1,088,906	-				-2.0
1,088,918	-				+1.3
1,088,932	+				+0.5
1,088,933	-				-1.5
1,088,933	-				-2.3
1,089,004	-				-0.0
1,089,016	+				-0.3
1,089,016	+				-1.2
1,089,016	+				+0.8
1,089,016	+				+1.3
1,089,016	+				+0.3
1,089,016	+				+1.2
1,089,016	+				+1.3
1,089,016	+				-2.6
1,089,017	-				-0.8
1,089,017	-				+2.2
1,089,017	-				-2.7
1,089,141	+		Sama_0900	0.18	-1.8
1,089,143	+		Sama_0900	0.19	-1.4
1,089,144	-		Sama_0900	0.19	-0.4
1,089,247	-		Sama_0900	0.34	+0.7
1,089,293	+		Sama_0900	0.41	+1.4
1,089,294	-		Sama_0900	0.41	+1.1
1,089,309	+		Sama_0900	0.43	-1.1
1,089,310	-		Sama_0900	0.44	-2.0
1,089,310	-		Sama_0900	0.44	+2.8
1,089,310	-		Sama_0900	0.44	+1.4
1,089,317	-		Sama_0900	0.45	+0.4
1,089,317	-		Sama_0900	0.45	-1.1
1,089,353	-		Sama_0900	0.50	-1.3
1,089,470	-		Sama_0900	0.68	-1.6
1,089,470	-		Sama_0900	0.68	-0.1
1,089,484	+		Sama_0900	0.70	+1.7
1,089,484	+		Sama_0900	0.70	+1.9
1,089,484	+		Sama_0900	0.70	+0.8
1,089,484	+		Sama_0900	0.70	-1.9
1,089,484	+		Sama_0900	0.70	-0.9
1,089,490	+		Sama_0900	0.71	-1.3
1,089,490	+		Sama_0900	0.71	-0.8
1,089,490	+		Sama_0900	0.71	+1.1
1,089,490	+		Sama_0900	0.71	-0.2
1,089,490	+		Sama_0900	0.71	+0.8
1,089,490	+		Sama_0900	0.71	-1.4
1,089,490	+		Sama_0900	0.71	-0.6
1,089,490	+		Sama_0900	0.71	+3.1
1,089,490	+		Sama_0900	0.71	+1.4
1,089,490	+		Sama_0900	0.71	-3.0
1,089,490	+		Sama_0900	0.71	+1.5
1,089,490	+		Sama_0900	0.71	+1.3
1,089,491	-		Sama_0900	0.71	-2.1
1,089,491	-		Sama_0900	0.71	-0.8
1,089,511	+		Sama_0900	0.74	-0.6
1,089,511	+		Sama_0900	0.74	-0.9
1,089,511	+		Sama_0900	0.74	-1.6
1,089,511	+		Sama_0900	0.74	+0.5
1,089,512	-		Sama_0900	0.74	-1.1
1,089,529	+		Sama_0900	0.76	+1.6
1,089,529	+		Sama_0900	0.76	+2.1
1,089,583	+		Sama_0900	0.84	-3.0
1,089,583	+		Sama_0900	0.84	+0.1
1,089,583	+		Sama_0900	0.84	-1.3
1,089,583	+		Sama_0900	0.84	+0.1
1,089,583	+		Sama_0900	0.84	-0.2
1,089,584	-		Sama_0900	0.85	-0.6
1,089,587	+		Sama_0900	0.85	-0.0
1,089,640	+				+1.6
1,089,640	+				+2.1
1,089,641	-				-0.8
1,089,641	-				+0.4
1,089,644	+				-0.3
1,089,644	+				+0.8
1,089,644	+				+0.7
1,089,644	+				+1.3
1,089,644	+				+1.7
1,089,645	-				+0.9
1,089,645	-				+1.9
1,089,651	+				+0.7
1,089,651	+				-0.2
1,089,652	-				+2.9
1,089,655	+				-3.2
1,089,655	+				+2.0
1,089,655	+				+1.2
1,089,655	+				-0.4
1,089,655	+				+0.2
1,089,656	-				-0.5
1,089,656	-				+0.1
1,089,656	-				-1.0
1,089,684	+				-0.7
1,089,685	-				+1.2
1,089,694	+				+0.8