Experiment: L-Histidine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Sama_0381 and Sama_0382 are separated by 371 nucleotides
Sama_0381: Sama_0381 - 2-deoxyglucose-6-phosphatase (RefSeq), at 469,245 to 469,910
_0381
Sama_0382: Sama_0382 - bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase (RefSeq), at 470,282 to 472,879
_0382
Position (kb) 470
471
472
473 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4
5 at 469.456 kb on + strand, within Sama_0381 at 469.457 kb on - strand, within Sama_0381 at 469.457 kb on - strand, within Sama_0381 at 469.457 kb on - strand, within Sama_0381 at 469.457 kb on - strand, within Sama_0381 at 469.457 kb on - strand, within Sama_0381 at 469.516 kb on + strand, within Sama_0381 at 469.517 kb on - strand, within Sama_0381 at 469.589 kb on + strand, within Sama_0381 at 469.590 kb on - strand, within Sama_0381 at 469.590 kb on - strand, within Sama_0381 at 469.590 kb on - strand, within Sama_0381 at 469.609 kb on + strand, within Sama_0381 at 469.659 kb on - strand, within Sama_0381 at 469.668 kb on + strand, within Sama_0381 at 469.668 kb on + strand, within Sama_0381 at 469.669 kb on - strand, within Sama_0381 at 469.708 kb on + strand, within Sama_0381 at 469.708 kb on + strand, within Sama_0381 at 469.708 kb on + strand, within Sama_0381 at 469.708 kb on + strand, within Sama_0381 at 469.708 kb on + strand, within Sama_0381 at 469.709 kb on - strand, within Sama_0381 at 469.709 kb on - strand, within Sama_0381 at 469.709 kb on - strand, within Sama_0381 at 469.709 kb on - strand, within Sama_0381 at 469.709 kb on - strand, within Sama_0381 at 469.709 kb on - strand, within Sama_0381 at 469.709 kb on - strand, within Sama_0381 at 469.712 kb on + strand, within Sama_0381 at 469.712 kb on + strand, within Sama_0381 at 469.712 kb on + strand, within Sama_0381 at 469.712 kb on + strand, within Sama_0381 at 469.713 kb on - strand, within Sama_0381 at 469.713 kb on - strand, within Sama_0381 at 469.713 kb on - strand, within Sama_0381 at 469.733 kb on - strand, within Sama_0381 at 469.733 kb on - strand, within Sama_0381 at 469.738 kb on + strand, within Sama_0381 at 469.739 kb on - strand, within Sama_0381 at 469.739 kb on - strand, within Sama_0381 at 469.739 kb on - strand, within Sama_0381 at 469.739 kb on - strand, within Sama_0381 at 469.751 kb on + strand, within Sama_0381 at 469.751 kb on + strand, within Sama_0381 at 469.752 kb on - strand, within Sama_0381 at 469.757 kb on + strand, within Sama_0381 at 469.825 kb on + strand, within Sama_0381 at 469.825 kb on + strand, within Sama_0381 at 469.826 kb on - strand, within Sama_0381 at 469.859 kb on + strand at 469.859 kb on + strand at 469.860 kb on - strand at 469.860 kb on - strand at 469.863 kb on + strand at 469.863 kb on + strand at 469.863 kb on + strand at 469.863 kb on + strand at 469.863 kb on + strand at 469.863 kb on + strand at 469.863 kb on + strand at 469.863 kb on + strand at 469.863 kb on + strand at 469.864 kb on - strand at 469.864 kb on - strand at 469.864 kb on - strand at 469.864 kb on - strand at 469.864 kb on - strand at 469.864 kb on - strand at 469.864 kb on - strand at 469.864 kb on - strand at 469.864 kb on - strand at 469.864 kb on - strand at 469.874 kb on + strand at 469.875 kb on - strand at 469.875 kb on - strand at 469.875 kb on - strand at 469.905 kb on + strand at 469.938 kb on - strand at 469.938 kb on - strand at 469.938 kb on - strand at 470.064 kb on + strand at 470.064 kb on + strand at 470.064 kb on + strand at 470.064 kb on + strand at 470.064 kb on + strand at 470.065 kb on - strand at 470.085 kb on + strand at 470.086 kb on - strand at 470.097 kb on + strand at 470.161 kb on + strand at 470.177 kb on + strand at 472.877 kb on + strand at 472.877 kb on + strand at 472.877 kb on + strand at 472.878 kb on - strand at 472.878 kb on - strand at 472.881 kb on + strand at 472.949 kb on + strand at 472.949 kb on + strand at 472.950 kb on - strand at 472.950 kb on - strand at 472.950 kb on - strand at 472.950 kb on - strand at 472.950 kb on - strand at 473.004 kb on + strand at 473.004 kb on + strand at 473.004 kb on + strand at 473.004 kb on + strand at 473.005 kb on - strand at 473.005 kb on - strand at 473.005 kb on - strand at 473.099 kb on + strand at 473.099 kb on + strand at 473.099 kb on + strand at 473.159 kb on + strand at 473.160 kb on - strand at 473.181 kb on + strand at 473.181 kb on + strand at 473.182 kb on - strand at 473.182 kb on - strand at 473.182 kb on - strand at 473.186 kb on - strand at 473.186 kb on - strand at 473.205 kb on + strand at 473.236 kb on + strand at 473.237 kb on - strand at 473.237 kb on - strand at 473.268 kb on + strand at 473.269 kb on - strand at 473.269 kb on - strand at 473.269 kb on - strand at 473.270 kb on + strand at 473.271 kb on - strand at 473.271 kb on - strand at 473.292 kb on + strand at 473.315 kb on - strand at 473.317 kb on - strand at 473.338 kb on + strand at 473.367 kb on - strand at 473.395 kb on - strand at 473.399 kb on + strand at 473.399 kb on + strand at 473.420 kb on - strand at 473.429 kb on + strand at 473.431 kb on + strand at 473.447 kb on - strand at 473.537 kb on - strand at 473.556 kb on + strand at 473.557 kb on - strand at 473.611 kb on - strand at 473.614 kb on + strand at 473.639 kb on - strand at 473.642 kb on + strand at 473.642 kb on + strand at 473.642 kb on + strand at 473.646 kb on + strand at 473.682 kb on + strand at 473.689 kb on + strand at 473.693 kb on + strand at 473.695 kb on + strand at 473.720 kb on + strand at 473.761 kb on + strand at 473.791 kb on - strand at 473.842 kb on - strand at 473.844 kb on + strand at 473.850 kb on + strand at 473.850 kb on + strand at 473.852 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Histidine (N) remove 469,456 + Sama_0381 0.32 -1.5 469,457 - Sama_0381 0.32 +1.3 469,457 - Sama_0381 0.32 -1.5 469,457 - Sama_0381 0.32 +0.0 469,457 - Sama_0381 0.32 -0.7 469,457 - Sama_0381 0.32 -1.1 469,516 + Sama_0381 0.41 -0.5 469,517 - Sama_0381 0.41 +0.9 469,589 + Sama_0381 0.52 +0.2 469,590 - Sama_0381 0.52 +1.9 469,590 - Sama_0381 0.52 -0.6 469,590 - Sama_0381 0.52 -2.3 469,609 + Sama_0381 0.55 +0.9 469,659 - Sama_0381 0.62 -1.4 469,668 + Sama_0381 0.64 -2.7 469,668 + Sama_0381 0.64 +0.8 469,669 - Sama_0381 0.64 -1.8 469,708 + Sama_0381 0.70 -0.6 469,708 + Sama_0381 0.70 +3.0 469,708 + Sama_0381 0.70 +0.7 469,708 + Sama_0381 0.70 -0.7 469,708 + Sama_0381 0.70 -1.5 469,709 - Sama_0381 0.70 -0.0 469,709 - Sama_0381 0.70 -1.8 469,709 - Sama_0381 0.70 +2.1 469,709 - Sama_0381 0.70 +4.5 469,709 - Sama_0381 0.70 +0.3 469,709 - Sama_0381 0.70 -2.0 469,709 - Sama_0381 0.70 +3.7 469,712 + Sama_0381 0.70 -0.4 469,712 + Sama_0381 0.70 +0.9 469,712 + Sama_0381 0.70 +0.1 469,712 + Sama_0381 0.70 -0.6 469,713 - Sama_0381 0.70 -0.7 469,713 - Sama_0381 0.70 -2.4 469,713 - Sama_0381 0.70 -1.2 469,733 - Sama_0381 0.73 -0.3 469,733 - Sama_0381 0.73 +0.3 469,738 + Sama_0381 0.74 -1.0 469,739 - Sama_0381 0.74 +1.3 469,739 - Sama_0381 0.74 -0.8 469,739 - Sama_0381 0.74 -0.1 469,739 - Sama_0381 0.74 +0.9 469,751 + Sama_0381 0.76 -1.1 469,751 + Sama_0381 0.76 -0.5 469,752 - Sama_0381 0.76 -2.0 469,757 + Sama_0381 0.77 +3.1 469,825 + Sama_0381 0.87 -0.4 469,825 + Sama_0381 0.87 +3.4 469,826 - Sama_0381 0.87 +1.5 469,859 + +1.5 469,859 + -0.0 469,860 - +2.5 469,860 - +0.8 469,863 + +1.2 469,863 + +1.5 469,863 + +0.5 469,863 + +0.5 469,863 + +0.9 469,863 + +0.5 469,863 + -0.3 469,863 + +0.1 469,863 + -1.1 469,864 - +1.4 469,864 - -0.7 469,864 - -1.8 469,864 - -0.3 469,864 - -2.3 469,864 - -0.8 469,864 - -1.5 469,864 - -1.5 469,864 - -2.0 469,864 - +1.1 469,874 + +1.7 469,875 - -0.0 469,875 - +0.6 469,875 - -0.3 469,905 + -1.0 469,938 - +0.4 469,938 - -1.3 469,938 - +1.4 470,064 + +2.0 470,064 + -1.8 470,064 + -2.5 470,064 + -3.7 470,064 + +1.8 470,065 - -0.5 470,085 + -0.2 470,086 - -2.8 470,097 + -2.5 470,161 + -1.5 470,177 + -1.5 472,877 + -2.0 472,877 + -0.6 472,877 + -0.0 472,878 - -1.1 472,878 - +2.4 472,881 + -1.1 472,949 + +0.0 472,949 + +0.5 472,950 - +0.4 472,950 - -0.3 472,950 - -0.5 472,950 - -1.5 472,950 - +1.2 473,004 + -0.5 473,004 + -1.9 473,004 + +2.5 473,004 + -0.3 473,005 - +0.8 473,005 - -0.9 473,005 - -0.8 473,099 + -2.1 473,099 + -2.3 473,099 + +1.1 473,159 + -0.6 473,160 - +2.4 473,181 + -0.2 473,181 + +0.3 473,182 - -1.2 473,182 - -2.1 473,182 - -1.6 473,186 - -0.6 473,186 - -1.3 473,205 + -0.1 473,236 + -1.1 473,237 - +0.3 473,237 - -2.8 473,268 + -3.2 473,269 - +0.2 473,269 - -3.0 473,269 - -0.6 473,270 + -2.3 473,271 - -0.9 473,271 - -2.5 473,292 + -0.4 473,315 - +1.1 473,317 - -0.7 473,338 + -2.1 473,367 - +1.1 473,395 - -0.0 473,399 + -0.6 473,399 + -2.0 473,420 - +1.1 473,429 + +0.8 473,431 + -2.9 473,447 - -1.3 473,537 - +2.1 473,556 + +2.3 473,557 - -2.0 473,611 - -0.3 473,614 + -1.9 473,639 - -2.7 473,642 + +0.5 473,642 + -1.3 473,642 + +4.8 473,646 + +0.4 473,682 + +1.5 473,689 + -1.5 473,693 + +0.0 473,695 + +1.5 473,720 + -2.2 473,761 + -0.5 473,791 - -0.6 473,842 - -0.3 473,844 + -0.9 473,850 + -2.7 473,850 + -1.6 473,852 + +0.3
Or see this region's nucleotide sequence