Strain Fitness in Shewanella oneidensis MR-1 around SO4620

Experiment: L-Glutamine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Glutamine (C)
4,814,095	-				-0.0
4,814,214	+				-3.9
4,814,222	-				+0.1
4,814,225	-				-1.5
4,814,230	-				-2.6
4,814,915	+				+0.3
4,814,954	-				-0.2
4,815,012	-				-0.0
4,815,052	+				-0.1
4,815,052	+				-0.4
4,815,124	+				+0.5
4,815,124	+				+0.4
4,815,132	-				-0.1
4,815,186	+				+0.4
4,815,186	+				-1.3
4,815,194	-				+0.4
4,815,207	+				+1.9
4,815,207	+				+0.2
4,815,207	+				+0.7
4,815,207	+				-0.4
4,815,234	-	ifcA-2	SO4620	0.11	-0.1
4,815,236	+	ifcA-2	SO4620	0.11	-0.1
4,815,284	+	ifcA-2	SO4620	0.14	+0.8
4,815,288	-	ifcA-2	SO4620	0.14	-1.6
4,815,313	-	ifcA-2	SO4620	0.16	-0.1
4,815,342	+	ifcA-2	SO4620	0.17	+0.1
4,815,396	+	ifcA-2	SO4620	0.20	-0.1
4,815,396	+	ifcA-2	SO4620	0.20	+0.1
4,815,403	+	ifcA-2	SO4620	0.21	-0.1
4,815,404	-	ifcA-2	SO4620	0.21	-1.1
4,815,404	-	ifcA-2	SO4620	0.21	+0.8
4,815,468	-	ifcA-2	SO4620	0.24	+0.3
4,815,507	+	ifcA-2	SO4620	0.27	-0.3
4,815,515	-	ifcA-2	SO4620	0.27	-1.0
4,815,526	-	ifcA-2	SO4620	0.28	+0.9
4,815,532	-	ifcA-2	SO4620	0.28	-0.6
4,815,536	-	ifcA-2	SO4620	0.28	-1.1
4,815,536	-	ifcA-2	SO4620	0.28	+0.2
4,815,587	+	ifcA-2	SO4620	0.31	-0.3
4,815,588	-	ifcA-2	SO4620	0.31	-0.7
4,815,595	-	ifcA-2	SO4620	0.32	+0.7
4,815,598	+	ifcA-2	SO4620	0.32	+0.9
4,815,625	-	ifcA-2	SO4620	0.33	+0.4
4,815,653	-	ifcA-2	SO4620	0.35	-0.7
4,815,668	+	ifcA-2	SO4620	0.36	-0.4
4,815,686	-	ifcA-2	SO4620	0.37	+0.4
4,815,754	+	ifcA-2	SO4620	0.41	-0.3
4,815,758	+	ifcA-2	SO4620	0.41	+1.5
4,815,758	+	ifcA-2	SO4620	0.41	+0.7
4,815,761	+	ifcA-2	SO4620	0.41	-0.4
4,815,761	+	ifcA-2	SO4620	0.41	+0.0
4,815,766	-	ifcA-2	SO4620	0.42	-0.7
4,815,772	-	ifcA-2	SO4620	0.42	+0.7
4,815,869	+	ifcA-2	SO4620	0.47	-1.6
4,815,946	+	ifcA-2	SO4620	0.52	-1.5
4,815,980	+	ifcA-2	SO4620	0.54	-0.7
4,816,007	-	ifcA-2	SO4620	0.55	+0.3
4,816,008	+	ifcA-2	SO4620	0.55	-0.2
4,816,009	+	ifcA-2	SO4620	0.55	-0.5
4,816,009	+	ifcA-2	SO4620	0.55	-0.1
4,816,010	+	ifcA-2	SO4620	0.55	-1.1
4,816,012	-	ifcA-2	SO4620	0.56	+0.4
4,816,016	+	ifcA-2	SO4620	0.56	+0.5
4,816,018	-	ifcA-2	SO4620	0.56	-0.6
4,816,035	+	ifcA-2	SO4620	0.57	-1.1
4,816,035	+	ifcA-2	SO4620	0.57	-1.0
4,816,043	-	ifcA-2	SO4620	0.57	-0.3
4,816,048	-	ifcA-2	SO4620	0.58	-0.5
4,816,066	-	ifcA-2	SO4620	0.59	+0.3
4,816,096	+	ifcA-2	SO4620	0.60	-0.5
4,816,098	+	ifcA-2	SO4620	0.60	-1.1
4,816,098	+	ifcA-2	SO4620	0.60	-1.3
4,816,098	+	ifcA-2	SO4620	0.60	+0.9
4,816,110	+	ifcA-2	SO4620	0.61	-0.5
4,816,117	+	ifcA-2	SO4620	0.62	-0.4
4,816,176	+	ifcA-2	SO4620	0.65	+0.1
4,816,183	-	ifcA-2	SO4620	0.65	+0.4
4,816,258	-	ifcA-2	SO4620	0.70	-0.4
4,816,270	+	ifcA-2	SO4620	0.70	+0.7
4,816,331	+	ifcA-2	SO4620	0.74	+0.3
4,816,339	+	ifcA-2	SO4620	0.74	-0.9
4,816,347	-	ifcA-2	SO4620	0.75	+0.2
4,816,356	+	ifcA-2	SO4620	0.75	-0.4
4,816,358	-	ifcA-2	SO4620	0.75	+0.7
4,816,393	+	ifcA-2	SO4620	0.77	+0.2
4,816,393	+	ifcA-2	SO4620	0.77	+0.5
4,816,401	-	ifcA-2	SO4620	0.78	+0.9
4,816,401	-	ifcA-2	SO4620	0.78	-1.8
4,816,408	+	ifcA-2	SO4620	0.78	+0.4
4,816,411	-	ifcA-2	SO4620	0.78	-0.6
4,816,444	+	ifcA-2	SO4620	0.80	+0.9
4,816,449	+	ifcA-2	SO4620	0.81	+0.1
4,816,457	-	ifcA-2	SO4620	0.81	+0.2
4,816,487	+	ifcA-2	SO4620	0.83	-0.6
4,816,495	-	ifcA-2	SO4620	0.83	+0.3
4,816,497	+	ifcA-2	SO4620	0.83	+0.2
4,816,497	+	ifcA-2	SO4620	0.83	-0.4
4,816,497	+	ifcA-2	SO4620	0.83	-0.8
4,816,497	+	ifcA-2	SO4620	0.83	+0.5
4,816,497	+	ifcA-2	SO4620	0.83	-0.2
4,816,497	+	ifcA-2	SO4620	0.83	-1.5
4,816,497	+	ifcA-2	SO4620	0.83	+0.7
4,816,497	+	ifcA-2	SO4620	0.83	+0.9
4,816,497	+	ifcA-2	SO4620	0.83	+0.2
4,816,497	+	ifcA-2	SO4620	0.83	-0.1
4,816,497	+	ifcA-2	SO4620	0.83	+0.1
4,816,497	+	ifcA-2	SO4620	0.83	-1.1
4,816,497	+	ifcA-2	SO4620	0.83	-0.6
4,816,503	+	ifcA-2	SO4620	0.84	-0.5
4,816,504	+	ifcA-2	SO4620	0.84	+1.7
4,816,505	-	ifcA-2	SO4620	0.84	+0.4
4,816,505	-	ifcA-2	SO4620	0.84	+1.1
4,816,505	-	ifcA-2	SO4620	0.84	+0.0
4,816,505	-	ifcA-2	SO4620	0.84	-0.4
4,816,505	-	ifcA-2	SO4620	0.84	-0.4
4,816,505	-	ifcA-2	SO4620	0.84	+0.2
4,816,505	-	ifcA-2	SO4620	0.84	+0.8
4,816,505	-	ifcA-2	SO4620	0.84	-0.3
4,816,505	-	ifcA-2	SO4620	0.84	-0.9
4,816,505	-	ifcA-2	SO4620	0.84	-1.1
4,816,505	-	ifcA-2	SO4620	0.84	-1.1
4,816,505	-	ifcA-2	SO4620	0.84	+0.6
4,816,505	-	ifcA-2	SO4620	0.84	+2.5
4,816,505	-	ifcA-2	SO4620	0.84	-0.5
4,816,505	-	ifcA-2	SO4620	0.84	-0.4
4,816,505	-	ifcA-2	SO4620	0.84	+0.2
4,816,505	-	ifcA-2	SO4620	0.84	-0.7
4,816,505	-	ifcA-2	SO4620	0.84	-0.8
4,816,505	-	ifcA-2	SO4620	0.84	-0.7
4,816,505	-	ifcA-2	SO4620	0.84	-0.3
4,816,511	-	ifcA-2	SO4620	0.84	+0.1
4,816,511	-	ifcA-2	SO4620	0.84	-0.4
4,816,525	+	ifcA-2	SO4620	0.85	-0.5
4,816,533	+	ifcA-2	SO4620	0.85	+0.9
4,816,536	+	ifcA-2	SO4620	0.86	+0.1
4,816,536	+	ifcA-2	SO4620	0.86	+1.3
4,816,543	+	ifcA-2	SO4620	0.86	-1.0
4,816,544	-	ifcA-2	SO4620	0.86	-0.1
4,816,571	-	ifcA-2	SO4620	0.88	-0.6
4,816,571	-	ifcA-2	SO4620	0.88	+0.2
4,816,588	+	ifcA-2	SO4620	0.89	+0.1
4,816,596	-	ifcA-2	SO4620	0.89	-0.8
4,816,615	+				-1.2
4,816,615	+				+0.5
4,816,632	+				+0.3
4,816,632	+				+0.9
4,816,640	-				-1.4
4,816,640	-				+1.2
4,816,644	+				+0.1
4,816,644	-				-1.1
4,816,660	+				+0.1
4,816,662	-				+0.0
4,816,663	-				+0.9
4,816,665	+				-0.8
4,816,665	+				+0.6
4,816,665	+				+0.9
4,816,665	+				-0.5
4,816,665	+				+0.1
4,816,665	+				+0.2
4,816,665	+				-0.3
4,816,665	+				-0.1
4,816,665	+				-1.1
4,816,668	-				+0.2
4,816,668	-				-0.6
4,816,670	+				-0.4
4,816,673	-				-0.2
4,816,673	-				-0.8
4,816,676	+				+1.0
4,816,676	+				+0.4
4,816,676	+				-0.6
4,816,678	-				+0.9
4,816,678	-				+0.5
4,816,678	-				+0.0
4,816,678	-				-0.6
4,816,681	+				-0.4
4,816,681	+				-0.4
4,816,681	+				-0.1
4,816,683	-				-0.5
4,816,684	-				+0.5
4,816,684	-				+0.3
4,816,684	-				+0.1
4,816,684	-				+0.9
4,816,686	+				-0.1
4,816,689	-				-0.2
4,816,689	-				+0.8
4,816,689	-				-0.1
4,816,689	-				-1.3
4,816,689	-				+0.2
4,816,691	+				+0.2
4,816,691	+				-0.6
4,816,694	-				+0.2
4,816,699	-				-0.4
4,816,699	-				-0.3
4,816,699	-				+0.3
4,816,721	+				-0.1
4,816,722	+				+0.5
4,816,722	+				-0.3
4,816,722	+				+0.3
4,816,722	+				-0.4
4,816,722	+				+1.0
4,816,722	+				+0.9
4,816,727	-				-0.1
4,816,730	-				-0.1
4,816,730	-				-1.1
4,816,730	-				+1.4
4,816,755	-				-0.4
4,816,763	-				+0.2
4,816,763	-				-0.2
4,816,816	+				-0.3
4,816,816	+				-0.6
4,816,816	+				-1.1
4,816,832	+				-0.1
4,816,834	-				-1.6
4,816,834	-				+0.9
4,816,840	-				+0.1
4,816,841	+				-2.5
4,816,849	-				+0.6
4,816,865	-				-0.4
4,816,879	+				-2.2
4,816,879	+				-0.1
4,816,879	+				+0.1
4,816,879	+				+0.6
4,816,887	-				+0.1
4,816,887	-				+0.9
4,816,887	-				-0.6
4,816,887	-				+0.2
4,816,887	-				+1.6
4,816,887	-				-0.2
4,816,894	+				+0.3
4,816,902	-				-0.1
4,816,902	-				-0.2
4,816,944	+				-0.2
4,816,944	-				+1.5
4,816,954	-				-0.2
4,816,974	+		SO4621	0.11	+0.3
4,816,982	-		SO4621	0.11	-1.3
4,816,983	+		SO4621	0.12	-0.8
4,816,983	+		SO4621	0.12	-0.4
4,816,983	+		SO4621	0.12	+0.2
4,816,983	+		SO4621	0.12	+0.1
4,816,983	+		SO4621	0.12	-0.0
4,816,983	+		SO4621	0.12	-0.3
4,816,983	+		SO4621	0.12	+1.0
4,816,983	+		SO4621	0.12	+0.9
4,816,983	+		SO4621	0.12	+0.1
4,816,983	+		SO4621	0.12	+1.2
4,816,983	+		SO4621	0.12	-0.3
4,816,983	+		SO4621	0.12	+1.4
4,816,983	+		SO4621	0.12	+0.1
4,816,983	+		SO4621	0.12	+0.4
4,816,983	+		SO4621	0.12	+0.5
4,816,983	+		SO4621	0.12	-0.3
4,816,983	+		SO4621	0.12	+0.3
4,816,983	+		SO4621	0.12	-0.5
4,816,991	-		SO4621	0.13	+0.0
4,816,991	-		SO4621	0.13	-0.1
4,816,991	-		SO4621	0.13	-0.5
4,816,991	-		SO4621	0.13	+0.9
4,816,991	-		SO4621	0.13	+0.1
4,816,991	-		SO4621	0.13	-0.0
4,816,991	-		SO4621	0.13	-0.2
4,816,991	-		SO4621	0.13	+0.4
4,816,991	-		SO4621	0.13	+0.6
4,816,991	-		SO4621	0.13	-0.4
4,816,991	-		SO4621	0.13	-0.9
4,816,991	-		SO4621	0.13	+0.0
4,816,991	-		SO4621	0.13	+1.4
4,816,991	-		SO4621	0.13	-0.7
4,816,991	-		SO4621	0.13	+0.4
4,816,991	-		SO4621	0.13	+0.9
4,816,991	-		SO4621	0.13	-0.8
4,816,991	-		SO4621	0.13	+0.3
4,816,991	-		SO4621	0.13	+0.2
4,816,991	-		SO4621	0.13	+0.2
4,816,993	+		SO4621	0.13	+0.0
4,816,993	+		SO4621	0.13	-0.9
4,816,993	+		SO4621	0.13	-0.1
4,816,993	+		SO4621	0.13	+0.7
4,816,993	+		SO4621	0.13	+0.4
4,816,993	+		SO4621	0.13	-0.4
4,816,993	+		SO4621	0.13	-0.2
4,816,995	+		SO4621	0.13	-0.7
4,816,995	+		SO4621	0.13	+0.1
4,817,001	-		SO4621	0.14	+0.3
4,817,001	-		SO4621	0.14	+0.7
4,817,001	-		SO4621	0.14	-0.8
4,817,001	-		SO4621	0.14	+0.1
4,817,001	-		SO4621	0.14	-0.7
4,817,001	-		SO4621	0.14	+0.5
4,817,001	-		SO4621	0.14	-0.1
4,817,001	-		SO4621	0.14	-0.0
4,817,001	-		SO4621	0.14	-0.2
4,817,001	-		SO4621	0.14	-0.5
4,817,001	-		SO4621	0.14	+0.9
4,817,001	-		SO4621	0.14	-0.3
4,817,005	+		SO4621	0.14	-0.4
4,817,005	+		SO4621	0.14	-0.3
4,817,005	+		SO4621	0.14	-0.4
4,817,005	+		SO4621	0.14	+0.7
4,817,005	+		SO4621	0.14	+0.1
4,817,005	+		SO4621	0.14	+0.3
4,817,005	+		SO4621	0.14	-0.2
4,817,005	+		SO4621	0.14	-0.7
4,817,005	+		SO4621	0.14	-0.4
4,817,005	+		SO4621	0.14	+0.1
4,817,005	+		SO4621	0.14	-0.1
4,817,005	+		SO4621	0.14	+0.1
4,817,005	+		SO4621	0.14	-0.5
4,817,013	-		SO4621	0.15	+4.1
4,817,013	-		SO4621	0.15	-0.1
4,817,013	-		SO4621	0.15	+0.3
4,817,013	-		SO4621	0.15	-0.3
4,817,013	-		SO4621	0.15	+0.1
4,817,013	-		SO4621	0.15	+1.4
4,817,013	-		SO4621	0.15	+1.2
4,817,013	-		SO4621	0.15	+0.3
4,817,018	+		SO4621	0.16	-1.9
4,817,018	+		SO4621	0.16	+0.2
4,817,018	+		SO4621	0.16	+0.0
4,817,018	+		SO4621	0.16	-0.7
4,817,018	-		SO4621	0.16	+0.2
4,817,020	+		SO4621	0.16	+0.3
4,817,020	+		SO4621	0.16	-1.1
4,817,020	+		SO4621	0.16	-0.5
4,817,020	+		SO4621	0.16	+0.1
4,817,020	+		SO4621	0.16	-0.3
4,817,020	+		SO4621	0.16	+0.2
4,817,020	+		SO4621	0.16	-0.2
4,817,020	+		SO4621	0.16	-0.3
4,817,020	+		SO4621	0.16	+0.9
4,817,021	-		SO4621	0.16	-0.1
4,817,023	-		SO4621	0.16	+0.9
4,817,026	-		SO4621	0.16	-0.5
4,817,026	-		SO4621	0.16	-0.1
4,817,026	-		SO4621	0.16	+1.3
4,817,026	-		SO4621	0.16	-0.1
4,817,026	-		SO4621	0.16	+1.7
4,817,026	-		SO4621	0.16	+0.2
4,817,026	-		SO4621	0.16	+0.1
4,817,028	-		SO4621	0.17	+0.1
4,817,028	-		SO4621	0.17	+0.1
4,817,028	-		SO4621	0.17	+0.0
4,817,028	-		SO4621	0.17	+0.4
4,817,028	-		SO4621	0.17	+0.4
4,817,028	-		SO4621	0.17	-0.9
4,817,037	+		SO4621	0.18	+0.3
4,817,045	-		SO4621	0.19	-0.1
4,817,053	+		SO4621	0.20	-1.2
4,817,053	+		SO4621	0.20	-0.8
4,817,053	+		SO4621	0.20	+0.1
4,817,053	+		SO4621	0.20	+0.2
4,817,053	+		SO4621	0.20	+0.3
4,817,053	+		SO4621	0.20	-0.1
4,817,053	+		SO4621	0.20	+0.9
4,817,053	+		SO4621	0.20	-1.4
4,817,053	+		SO4621	0.20	+0.8
4,817,053	+		SO4621	0.20	+0.9
4,817,053	+		SO4621	0.20	-2.2
4,817,053	+		SO4621	0.20	+0.6
4,817,053	+		SO4621	0.20	-0.3
4,817,053	+		SO4621	0.20	-0.3
4,817,053	+		SO4621	0.20	-0.4
4,817,053	+		SO4621	0.20	+0.5
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