Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c34910

Experiment: L-Lactate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Lactate (C)
3,662,419	+		PGA1_c34900	0.27	+1.5
3,662,419	+		PGA1_c34900	0.27	+1.2
3,662,427	-		PGA1_c34900	0.28	+0.2
3,662,427	-		PGA1_c34900	0.28	+1.1
3,662,494	+		PGA1_c34900	0.33	+1.2
3,662,502	-		PGA1_c34900	0.34	-0.3
3,662,536	+		PGA1_c34900	0.37	+0.6
3,662,544	-		PGA1_c34900	0.37	+0.2
3,662,544	-		PGA1_c34900	0.37	-0.1
3,662,560	-		PGA1_c34900	0.39	+0.8
3,662,616	-		PGA1_c34900	0.43	-1.2
3,662,622	-		PGA1_c34900	0.44	-0.3
3,662,622	-		PGA1_c34900	0.44	-1.9
3,662,650	+		PGA1_c34900	0.46	+0.1
3,662,667	+		PGA1_c34900	0.47	-0.1
3,662,669	+		PGA1_c34900	0.48	+0.4
3,662,675	-		PGA1_c34900	0.48	+1.3
3,662,787	+		PGA1_c34900	0.57	-0.9
3,662,796	+		PGA1_c34900	0.58	-0.5
3,662,797	+		PGA1_c34900	0.58	-1.5
3,662,797	+		PGA1_c34900	0.58	-0.4
3,662,797	+		PGA1_c34900	0.58	-1.7
3,662,805	-		PGA1_c34900	0.59	-0.8
3,662,805	-		PGA1_c34900	0.59	-3.3
3,662,805	-		PGA1_c34900	0.59	-2.0
3,662,817	-		PGA1_c34900	0.60	+1.5
3,662,827	-		PGA1_c34900	0.60	-1.0
3,662,898	+		PGA1_c34900	0.66	-1.8
3,662,901	-		PGA1_c34900	0.66	-0.8
3,662,906	+		PGA1_c34900	0.67	-0.5
3,662,911	+		PGA1_c34900	0.67	+0.1
3,662,919	-		PGA1_c34900	0.68	+0.3
3,662,924	+		PGA1_c34900	0.68	-0.9
3,662,932	-		PGA1_c34900	0.69	-0.3
3,662,932	-		PGA1_c34900	0.69	-0.2
3,663,009	+		PGA1_c34900	0.75	-1.0
3,663,011	+		PGA1_c34900	0.75	+0.7
3,663,019	-		PGA1_c34900	0.76	+1.1
3,663,024	+		PGA1_c34900	0.76	-1.3
3,663,054	-		PGA1_c34900	0.79	+0.9
3,663,061	+		PGA1_c34900	0.79	-2.5
3,663,068	+		PGA1_c34900	0.80	+1.2
3,663,069	-		PGA1_c34900	0.80	-1.7
3,663,149	+		PGA1_c34900	0.87	-1.1
3,663,163	+		PGA1_c34900	0.88	-0.4
3,663,175	+		PGA1_c34900	0.89	-1.0
3,663,176	-		PGA1_c34900	0.89	-0.0
3,663,183	-		PGA1_c34900	0.89	-0.4
3,663,238	+				+0.3
3,663,310	+				-0.3
3,663,320	-				+1.0
3,663,325	+				+1.5
3,663,325	+				-1.3
3,663,325	+				-0.5
3,663,333	-				-1.3
3,663,333	-				+0.1
3,663,356	+				-0.4
3,663,356	+				-0.7
3,663,356	+				+0.7
3,663,364	-				+1.9
3,663,364	-				+1.0
3,663,364	-				-1.0
3,663,364	-				-0.7
3,663,364	-				-0.3
3,663,386	-				-2.0
3,663,460	+		PGA1_c34910	0.10	+0.1
3,663,492	+		PGA1_c34910	0.14	+0.3
3,663,505	-		PGA1_c34910	0.16	+0.0
3,663,535	+		PGA1_c34910	0.20	+0.8
3,663,557	-		PGA1_c34910	0.23	-1.5
3,663,607	+		PGA1_c34910	0.30	-0.2
3,663,612	+		PGA1_c34910	0.30	-0.5
3,663,615	-		PGA1_c34910	0.31	-0.6
3,663,620	-		PGA1_c34910	0.31	-1.0
3,663,654	-		PGA1_c34910	0.36	-1.1
3,663,702	+		PGA1_c34910	0.42	+0.3
3,663,708	+		PGA1_c34910	0.43	-1.7
3,663,710	-		PGA1_c34910	0.43	+0.5
3,663,710	-		PGA1_c34910	0.43	+0.8
3,663,710	-		PGA1_c34910	0.43	-0.1
3,663,710	-		PGA1_c34910	0.43	+0.5
3,663,724	+		PGA1_c34910	0.45	-0.5
3,663,724	+		PGA1_c34910	0.45	-0.1
3,663,725	+		PGA1_c34910	0.45	-0.7
3,663,733	-		PGA1_c34910	0.46	-1.0
3,663,735	+		PGA1_c34910	0.47	-0.4
3,663,735	+		PGA1_c34910	0.47	-1.1
3,663,735	+		PGA1_c34910	0.47	+1.9
3,663,735	+		PGA1_c34910	0.47	-2.3
3,663,735	+		PGA1_c34910	0.47	-0.5
3,663,743	-		PGA1_c34910	0.48	-0.5
3,663,743	-		PGA1_c34910	0.48	-0.2
3,663,743	-		PGA1_c34910	0.48	+0.9
3,663,743	-		PGA1_c34910	0.48	+0.3
3,663,761	+		PGA1_c34910	0.50	-0.7
3,663,761	+		PGA1_c34910	0.50	-0.5
3,663,761	+		PGA1_c34910	0.50	+0.2
3,663,761	+		PGA1_c34910	0.50	+0.6
3,663,761	+		PGA1_c34910	0.50	-2.0
3,663,761	+		PGA1_c34910	0.50	-1.8
3,663,761	+		PGA1_c34910	0.50	-0.9
3,663,761	+		PGA1_c34910	0.50	+0.6
3,663,761	+		PGA1_c34910	0.50	-0.1
3,663,761	+		PGA1_c34910	0.50	+0.4
3,663,769	-		PGA1_c34910	0.51	+0.2
3,663,769	-		PGA1_c34910	0.51	-0.1
3,663,769	-		PGA1_c34910	0.51	-0.1
3,663,769	-		PGA1_c34910	0.51	-1.1
3,663,769	-		PGA1_c34910	0.51	-0.1
3,663,769	-		PGA1_c34910	0.51	-0.2
3,663,769	-		PGA1_c34910	0.51	-0.3
3,663,769	-		PGA1_c34910	0.51	-0.4
3,663,769	-		PGA1_c34910	0.51	-0.5
3,663,769	-		PGA1_c34910	0.51	-0.3
3,663,769	-		PGA1_c34910	0.51	-1.1
3,663,793	+		PGA1_c34910	0.54	-0.4
3,663,812	-		PGA1_c34910	0.57	+0.8
3,663,827	-		PGA1_c34910	0.59	-1.3
3,663,842	+		PGA1_c34910	0.61	-0.6
3,663,844	-		PGA1_c34910	0.61	-0.9
3,663,850	-		PGA1_c34910	0.62	+0.5
3,663,850	-		PGA1_c34910	0.62	-1.0
3,663,860	+		PGA1_c34910	0.63	-0.2
3,663,948	-		PGA1_c34910	0.75	-0.5
3,664,016	-		PGA1_c34910	0.84	-2.3
3,664,016	-		PGA1_c34910	0.84	-0.0
3,664,037	+		PGA1_c34910	0.87	-0.4
3,664,087	+				+0.0
3,664,087	+				-0.6
3,664,087	+				-0.1
3,664,092	+				+1.4
3,664,092	+				+0.9
3,664,092	+				-0.4
3,664,092	+				-1.1
3,664,092	+				-1.1
3,664,092	+				+1.2
3,664,092	+				+0.7
3,664,092	+				-0.3
3,664,092	+				-0.7
3,664,092	+				-1.5
3,664,095	-				+1.2
3,664,100	-				-2.4
3,664,144	+				-0.3
3,664,144	+				-0.1
3,664,144	+				+0.8
3,664,144	+				+0.6
3,664,144	+				+0.2
3,664,152	-				-0.7
3,664,152	-				-1.0
3,664,152	-				-0.4
3,664,152	-				-1.7
3,664,200	-				-0.6
3,664,209	+				-0.2
3,664,538	-		PGA1_c34920	0.22	-1.1