Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c16560

Experiment: L-Lactate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Lactate (C)
1,716,830	+		PGA1_c16550	0.11	-0.1
1,716,850	-		PGA1_c16550	0.13	-0.9
1,716,860	-		PGA1_c16550	0.14	+0.2
1,716,992	+		PGA1_c16550	0.28	+0.2
1,717,016	+		PGA1_c16550	0.31	+0.3
1,717,016	+		PGA1_c16550	0.31	-0.2
1,717,016	+		PGA1_c16550	0.31	+1.3
1,717,024	-		PGA1_c16550	0.32	-3.7
1,717,024	-		PGA1_c16550	0.32	-1.4
1,717,069	-		PGA1_c16550	0.37	-0.3
1,717,081	-		PGA1_c16550	0.38	+0.2
1,717,197	+		PGA1_c16550	0.51	+0.5
1,717,228	+		PGA1_c16550	0.54	-0.0
1,717,241	-		PGA1_c16550	0.55	-1.9
1,717,255	+		PGA1_c16550	0.57	-3.9
1,717,255	+		PGA1_c16550	0.57	+0.4
1,717,309	+		PGA1_c16550	0.63	-1.0
1,717,309	+		PGA1_c16550	0.63	+0.0
1,717,309	-		PGA1_c16550	0.63	+0.8
1,717,317	-		PGA1_c16550	0.64	+1.1
1,717,344	+		PGA1_c16550	0.67	+1.4
1,717,352	-		PGA1_c16550	0.68	-0.3
1,717,352	-		PGA1_c16550	0.68	+1.3
1,717,352	-		PGA1_c16550	0.68	-0.4
1,717,352	-		PGA1_c16550	0.68	+0.2
1,717,381	+		PGA1_c16550	0.71	-0.8
1,717,389	-		PGA1_c16550	0.72	+1.0
1,717,389	-		PGA1_c16550	0.72	+0.5
1,717,530	+		PGA1_c16550	0.87	-2.0
1,717,561	+				+0.1
1,717,561	+				+0.1
1,717,566	+				-1.2
1,717,567	+				+0.5
1,717,567	+				-0.1
1,717,569	-				-2.0
1,717,575	-				+0.6
1,717,658	-				-1.2
1,717,661	+				-0.2
1,717,661	+				+1.3
1,717,661	+				-0.2
1,717,667	+				+1.0
1,717,667	+				+1.5
1,717,669	-				+0.4
1,717,737	+				+0.3
1,717,746	+				-0.5
1,717,754	-				+1.4
1,717,758	+				-0.2
1,717,776	-				-0.3
1,717,823	-				+0.8
1,717,906	+		PGA1_c16560	0.14	-0.9
1,717,914	-		PGA1_c16560	0.15	+0.6
1,717,923	+		PGA1_c16560	0.15	+0.3
1,717,931	-		PGA1_c16560	0.16	-0.2
1,717,931	-		PGA1_c16560	0.16	+1.0
1,717,950	-		PGA1_c16560	0.18	+1.5
1,717,963	+		PGA1_c16560	0.19	-1.0
1,717,965	-		PGA1_c16560	0.19	-1.6
1,717,971	-		PGA1_c16560	0.20	-0.6
1,717,971	-		PGA1_c16560	0.20	-0.6
1,717,998	+		PGA1_c16560	0.22	+1.4
1,717,998	+		PGA1_c16560	0.22	-1.0
1,717,998	+		PGA1_c16560	0.22	+0.6
1,717,998	+		PGA1_c16560	0.22	-0.4
1,718,006	-		PGA1_c16560	0.23	-1.9
1,718,006	-		PGA1_c16560	0.23	-1.0
1,718,006	-		PGA1_c16560	0.23	+0.6
1,718,011	+		PGA1_c16560	0.23	+0.5
1,718,022	-		PGA1_c16560	0.24	-1.0
1,718,073	+		PGA1_c16560	0.28	+0.3
1,718,090	-		PGA1_c16560	0.30	-1.5
1,718,090	-		PGA1_c16560	0.30	-0.6
1,718,118	+		PGA1_c16560	0.32	-0.6
1,718,126	-		PGA1_c16560	0.33	-1.8
1,718,126	-		PGA1_c16560	0.33	+1.2
1,718,126	-		PGA1_c16560	0.33	+1.2
1,718,126	-		PGA1_c16560	0.33	-0.6
1,718,156	+		PGA1_c16560	0.36	-0.4
1,718,164	-		PGA1_c16560	0.36	-1.4
1,718,189	+		PGA1_c16560	0.39	-1.1
1,718,189	+		PGA1_c16560	0.39	+0.5
1,718,189	+		PGA1_c16560	0.39	+0.3
1,718,189	+		PGA1_c16560	0.39	+1.0
1,718,260	-		PGA1_c16560	0.45	-0.5
1,718,288	-		PGA1_c16560	0.47	+0.1
1,718,312	+		PGA1_c16560	0.50	-1.4
1,718,328	+		PGA1_c16560	0.51	-0.6
1,718,375	+		PGA1_c16560	0.55	-2.8
1,718,388	-		PGA1_c16560	0.56	-0.6
1,718,400	-		PGA1_c16560	0.57	-0.0
1,718,400	-		PGA1_c16560	0.57	-1.5
1,718,442	-		PGA1_c16560	0.61	-0.3
1,718,442	-		PGA1_c16560	0.61	-0.8
1,718,561	-		PGA1_c16560	0.71	-1.9
1,718,616	+		PGA1_c16560	0.76	-1.1
1,718,623	+		PGA1_c16560	0.77	-0.4
1,718,671	-		PGA1_c16560	0.81	+0.5
1,718,677	+		PGA1_c16560	0.82	-2.4
1,718,678	-		PGA1_c16560	0.82	-1.8
1,718,732	-		PGA1_c16560	0.86	-1.4
1,718,782	+				-1.8
1,718,835	+				-1.0
1,718,851	+				+0.4
1,718,851	+				-1.0
1,718,851	+				-0.5
1,718,851	+				-0.2
1,718,851	+				-0.4
1,718,851	+				-1.7
1,718,851	+				+0.3
1,718,851	+				-0.2
1,718,851	+				-0.2
1,718,851	+				-3.0
1,718,851	+				+0.9
1,718,859	-				-0.9
1,718,859	-				+0.3
1,718,859	-				-0.8
1,718,859	-				-0.5
1,718,861	+				+0.3
1,718,900	+				+1.0
1,718,944	+				-1.4
1,718,952	-				+0.7
1,718,967	+				-0.0
1,719,020	+				-0.2
1,719,030	-				-0.2
1,719,030	-				-1.5
1,719,043	+				+0.8
1,719,100	+				+1.0
1,719,101	+				-0.0
1,719,108	-				+1.1
1,719,153	-				-0.9
1,719,153	-				+1.0
1,719,177	-				-1.5
1,719,210	+				-0.9
1,719,215	+				-1.5
1,719,220	+				+0.5
1,719,223	-				-0.2
1,719,223	-				+0.2
1,719,235	+				+0.6
1,719,245	+				-1.0
1,719,245	+				+0.4
1,719,253	-				-0.8
1,719,253	-				-0.6
1,719,253	-				+1.3
1,719,253	-				-1.8
1,719,266	+				-2.2
1,719,273	+				-0.4
1,719,274	-				-1.4
1,719,278	+				-1.4
1,719,281	-				+0.4
1,719,284	-				-0.1
1,719,286	-				+0.4
1,719,290	+				-0.4
1,719,297	+				-1.7
1,719,305	-				+0.4
1,719,312	-				-0.2
1,719,344	-				-1.4
1,719,360	+				+0.2
1,719,360	+				-1.3
1,719,360	+				-1.4
1,719,361	-				-0.2
1,719,367	+				+1.3
1,719,414	+				+0.5
1,719,414	+				-0.5
1,719,414	+				-0.0
1,719,414	+				+1.0
1,719,414	+				-0.2
1,719,414	+				+0.3
1,719,422	-				-0.0
1,719,422	-				-1.7
1,719,422	-				+0.6
1,719,422	-				-1.5
1,719,422	-				+0.4
1,719,422	-				-1.5
1,719,449	+				-0.8
1,719,465	+				+0.1
1,719,488	+				-0.1
1,719,488	+				-1.4
1,719,488	+				+0.2
1,719,488	+				+0.5
1,719,488	+				+0.7
1,719,488	+				-0.4
1,719,488	+				+0.3
1,719,488	+				+0.3
1,719,488	+				+1.7
1,719,488	+				-1.8
1,719,488	+				-0.4
1,719,488	+				+1.0
1,719,488	+				-0.4
1,719,488	+				-0.6
1,719,488	+				-2.6
1,719,488	+				+1.0
1,719,488	+				+0.8
1,719,488	+				+2.2
1,719,496	-				-1.6
1,719,496	-				+1.5
1,719,496	-				+0.8
1,719,496	-				+0.3
1,719,496	-				-0.0
1,719,496	-				+0.5
1,719,496	-				-1.4
1,719,496	-				+0.8
1,719,496	-				+2.7
1,719,496	-				+0.6
1,719,496	-				+0.4
1,719,496	-				+0.8
1,719,496	-				-0.6
1,719,496	-				-0.4
1,719,496	-				+0.9
1,719,496	-				+1.2
1,719,496	-				+0.5
1,719,496	-				+1.0
1,719,510	+		PGA1_c16570	0.10	-0.8
1,719,510	+		PGA1_c16570	0.10	+0.8
1,719,510	+		PGA1_c16570	0.10	+0.1
1,719,510	+		PGA1_c16570	0.10	+1.0
1,719,510	+		PGA1_c16570	0.10	-2.5
1,719,510	+		PGA1_c16570	0.10	+0.1
1,719,510	+		PGA1_c16570	0.10	-0.6
1,719,510	+		PGA1_c16570	0.10	+1.1
1,719,511	+		PGA1_c16570	0.10	-0.0
1,719,518	-		PGA1_c16570	0.11	-1.0
1,719,518	-		PGA1_c16570	0.11	-1.0
1,719,532	-		PGA1_c16570	0.13	+0.9
1,719,532	-		PGA1_c16570	0.13	-0.3
1,719,532	-		PGA1_c16570	0.13	+0.4
1,719,532	-		PGA1_c16570	0.13	+2.0
1,719,532	-		PGA1_c16570	0.13	-0.5
1,719,532	-		PGA1_c16570	0.13	+0.8
1,719,532	-		PGA1_c16570	0.13	-0.7
1,719,539	+		PGA1_c16570	0.14	+0.4
1,719,556	+		PGA1_c16570	0.17	-0.5
1,719,556	+		PGA1_c16570	0.17	-0.7
1,719,556	+		PGA1_c16570	0.17	-0.6
1,719,556	+		PGA1_c16570	0.17	+0.1
1,719,556	+		PGA1_c16570	0.17	-0.1
1,719,564	-		PGA1_c16570	0.18	-0.0
1,719,564	-		PGA1_c16570	0.18	+1.5
1,719,564	-		PGA1_c16570	0.18	+2.0
1,719,564	-		PGA1_c16570	0.18	-0.7
1,719,569	-		PGA1_c16570	0.19	-0.0
1,719,575	+		PGA1_c16570	0.20	-1.2
1,719,575	+		PGA1_c16570	0.20	+0.5
1,719,575	-		PGA1_c16570	0.20	+2.0
1,719,587	-		PGA1_c16570	0.21	+0.2
1,719,591	+		PGA1_c16570	0.22	+1.8
1,719,597	+		PGA1_c16570	0.23	-0.8
1,719,611	+		PGA1_c16570	0.25	-0.4
1,719,611	+		PGA1_c16570	0.25	-0.4
1,719,611	+		PGA1_c16570	0.25	-1.0
1,719,611	+		PGA1_c16570	0.25	-0.8
1,719,616	+		PGA1_c16570	0.26	-0.6
1,719,619	-		PGA1_c16570	0.26	-0.6
1,719,619	-		PGA1_c16570	0.26	+1.3
1,719,619	-		PGA1_c16570	0.26	+0.1
1,719,619	-		PGA1_c16570	0.26	-1.4
1,719,619	-		PGA1_c16570	0.26	-0.2
1,719,619	-		PGA1_c16570	0.26	+1.4
1,719,619	-		PGA1_c16570	0.26	-0.8
1,719,624	-		PGA1_c16570	0.27	-0.4
1,719,629	-		PGA1_c16570	0.28	+1.4
1,719,644	+		PGA1_c16570	0.30	+2.5
1,719,652	-		PGA1_c16570	0.31	+1.2
1,719,652	-		PGA1_c16570	0.31	+1.5
1,719,652	-		PGA1_c16570	0.31	-0.8
1,719,652	-		PGA1_c16570	0.31	-0.5
1,719,660	+		PGA1_c16570	0.32	+0.2
1,719,671	+		PGA1_c16570	0.34	-0.2
1,719,671	+		PGA1_c16570	0.34	+1.0
1,719,671	+		PGA1_c16570	0.34	+1.0
1,719,671	+		PGA1_c16570	0.34	+1.4
1,719,679	-		PGA1_c16570	0.35	-0.6
1,719,679	-		PGA1_c16570	0.35	+1.6
1,719,679	-		PGA1_c16570	0.35	-0.2
1,719,679	-		PGA1_c16570	0.35	+1.0
1,719,679	-		PGA1_c16570	0.35	-1.0
1,719,679	-		PGA1_c16570	0.35	-2.0
1,719,690	+		PGA1_c16570	0.37	+0.5
1,719,690	+		PGA1_c16570	0.37	+0.3
1,719,690	+		PGA1_c16570	0.37	-0.3
1,719,690	+		PGA1_c16570	0.37	-0.8
1,719,690	+		PGA1_c16570	0.37	+1.5
1,719,697	+		PGA1_c16570	0.38	-0.2
1,719,698	-		PGA1_c16570	0.38	-2.7
1,719,698	-		PGA1_c16570	0.38	-0.8
1,719,698	-		PGA1_c16570	0.38	-1.0
1,719,698	-		PGA1_c16570	0.38	-0.1
1,719,724	+		PGA1_c16570	0.42	+0.1
1,719,724	+		PGA1_c16570	0.42	-0.1
1,719,724	+		PGA1_c16570	0.42	-1.1
1,719,724	+		PGA1_c16570	0.42	+0.9
1,719,724	+		PGA1_c16570	0.42	+0.8
1,719,724	+		PGA1_c16570	0.42	-0.5
1,719,726	-		PGA1_c16570	0.42	+0.7
1,719,732	-		PGA1_c16570	0.43	-0.8
1,719,732	-		PGA1_c16570	0.43	-0.1
1,719,732	-		PGA1_c16570	0.43	-1.4
1,719,732	-		PGA1_c16570	0.43	-0.3
1,719,732	-		PGA1_c16570	0.43	-0.8
1,719,732	-		PGA1_c16570	0.43	+0.7
1,719,732	-		PGA1_c16570	0.43	+0.5
1,719,732	-		PGA1_c16570	0.43	+2.0
1,719,737	-		PGA1_c16570	0.44	+0.9
1,719,741	+		PGA1_c16570	0.44	-1.0
1,719,756	+		PGA1_c16570	0.46	+1.2
1,719,756	+		PGA1_c16570	0.46	-1.0
1,719,792	-		PGA1_c16570	0.52	-1.0
1,719,804	+		PGA1_c16570	0.53	-1.0
1,719,812	-		PGA1_c16570	0.55	-2.6
1,719,814	+		PGA1_c16570	0.55	-0.0
1,719,827	+		PGA1_c16570	0.57	-1.0
1,719,827	+		PGA1_c16570	0.57	-0.3
1,719,832	+		PGA1_c16570	0.58	-0.6
1,719,835	-		PGA1_c16570	0.58	-0.0
1,719,835	-		PGA1_c16570	0.58	-1.6
1,719,835	-		PGA1_c16570	0.58	+0.5
1,719,835	-		PGA1_c16570	0.58	+0.1
1,719,837	+		PGA1_c16570	0.58	-1.0
1,719,844	+		PGA1_c16570	0.59	+0.1
1,719,845	-		PGA1_c16570	0.59	+0.3
1,719,845	-		PGA1_c16570	0.59	-0.3
1,719,845	-		PGA1_c16570	0.59	+1.0
1,719,846	-		PGA1_c16570	0.60	+0.4
1,719,846	-		PGA1_c16570	0.60	+0.2
1,719,852	+		PGA1_c16570	0.60	-0.7
1,719,852	+		PGA1_c16570	0.60	+1.1
1,719,860	-		PGA1_c16570	0.62	+0.5
1,719,875	+		PGA1_c16570	0.64	+1.4
1,719,883	-		PGA1_c16570	0.65	-1.0
1,719,883	-		PGA1_c16570	0.65	+0.8