Strain Fitness in Shewanella amazonensis SB2B around Sama_3618

Experiment: Ammonium chloride (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ammonium chloride (N)
4,257,627	-		Sama_3616	0.84	+0.5
4,257,627	-		Sama_3616	0.84	+0.2
4,257,627	-		Sama_3616	0.84	-0.3
4,257,710	+		Sama_3616	0.88	+0.2
4,257,710	+		Sama_3616	0.88	-0.1
4,257,711	-		Sama_3616	0.88	-0.8
4,257,711	-		Sama_3616	0.88	+0.1
4,257,711	-		Sama_3616	0.88	-2.4
4,257,711	-		Sama_3616	0.88	-0.1
4,257,711	-		Sama_3616	0.88	+0.0
4,257,711	-		Sama_3616	0.88	+1.9
4,257,733	+		Sama_3616	0.90	+0.4
4,257,733	+		Sama_3616	0.90	+1.2
4,257,733	+		Sama_3616	0.90	+0.1
4,257,734	-		Sama_3616	0.90	-0.6
4,257,783	+				-0.5
4,257,784	-				+2.0
4,257,784	-				+0.1
4,257,828	+				+0.4
4,257,828	+				+0.6
4,257,828	+				+0.7
4,257,829	-				-0.8
4,257,829	-				-0.0
4,257,829	-				-0.8
4,257,829	-				-1.4
4,257,878	+				-1.8
4,257,878	+				-1.8
4,257,878	+				-1.1
4,257,878	+				+0.6
4,257,878	+				+0.8
4,257,879	-				+1.1
4,257,879	-				-1.7
4,257,879	-				+0.6
4,257,879	-				+0.1
4,257,879	-				+0.5
4,257,900	+				+0.9
4,257,901	-				-0.4
4,257,932	+				-2.1
4,257,932	+				+0.1
4,257,933	-				-1.2
4,257,933	-				-0.5
4,257,936	+				+0.5
4,257,936	+				-2.9
4,257,936	+				+0.7
4,257,936	+				-0.2
4,257,950	+				+0.6
4,257,959	+				-0.2
4,257,960	-				+0.4
4,257,968	+				+1.4
4,257,969	-				+0.2
4,258,014	+				-0.1
4,258,014	+				+0.2
4,258,218	-		Sama_3617	0.39	+0.6
4,258,229	+		Sama_3617	0.41	-0.1
4,258,229	+		Sama_3617	0.41	-0.8
4,258,229	+		Sama_3617	0.41	-1.1
4,258,229	+		Sama_3617	0.41	+1.1
4,258,230	-		Sama_3617	0.41	-0.6
4,258,230	-		Sama_3617	0.41	+0.0
4,258,230	-		Sama_3617	0.41	+0.3
4,258,248	+		Sama_3617	0.44	+0.7
4,258,249	-		Sama_3617	0.44	+0.4
4,258,249	-		Sama_3617	0.44	-0.1
4,258,256	+		Sama_3617	0.45	+0.9
4,258,256	+		Sama_3617	0.45	+0.4
4,258,256	+		Sama_3617	0.45	+0.0
4,258,256	+		Sama_3617	0.45	-0.3
4,258,257	-		Sama_3617	0.45	+0.5
4,258,257	-		Sama_3617	0.45	+1.3
4,258,257	-		Sama_3617	0.45	+0.3
4,258,257	-		Sama_3617	0.45	-0.2
4,258,323	+		Sama_3617	0.55	-0.1
4,258,323	+		Sama_3617	0.55	-0.1
4,258,323	+		Sama_3617	0.55	+1.0
4,258,323	+		Sama_3617	0.55	+0.1
4,258,324	-		Sama_3617	0.55	+0.8
4,258,324	-		Sama_3617	0.55	+0.1
4,258,324	-		Sama_3617	0.55	+0.1
4,258,324	-		Sama_3617	0.55	+1.3
4,258,420	+		Sama_3617	0.70	-0.2
4,258,420	+		Sama_3617	0.70	-0.8
4,258,421	-		Sama_3617	0.70	+1.4
4,258,434	+		Sama_3617	0.72	+0.7
4,258,497	+		Sama_3617	0.82	-1.1
4,258,497	+		Sama_3617	0.82	+1.0
4,258,498	-		Sama_3617	0.82	-0.1
4,258,512	+		Sama_3617	0.84	-0.1
4,258,512	+		Sama_3617	0.84	+0.3
4,258,513	-		Sama_3617	0.85	+0.7
4,258,602	+				+0.9
4,258,602	+				-0.4
4,258,602	+				-0.9
4,258,602	+				-0.0
4,258,603	-				+0.9
4,258,603	-				-0.5
4,258,603	-				+1.2
4,258,646	+				-0.4
4,258,706	+		Sama_3618	0.21	-0.0
4,258,707	-		Sama_3618	0.21	-0.5
4,258,707	-		Sama_3618	0.21	-0.7
4,258,808	+		Sama_3618	0.43	+0.0
4,258,808	+		Sama_3618	0.43	+0.2
4,258,808	+		Sama_3618	0.43	+0.1
4,258,809	-		Sama_3618	0.43	+0.8
4,258,809	-		Sama_3618	0.43	-0.6
4,258,826	+		Sama_3618	0.47	-2.3
4,258,827	-		Sama_3618	0.47	-1.0
4,258,855	+		Sama_3618	0.53	+0.6
4,258,855	+		Sama_3618	0.53	-0.5
4,258,855	+		Sama_3618	0.53	-0.8
4,258,855	+		Sama_3618	0.53	-0.9
4,258,855	+		Sama_3618	0.53	-0.7
4,258,855	+		Sama_3618	0.53	-0.8
4,258,855	+		Sama_3618	0.53	-0.5
4,258,856	-		Sama_3618	0.53	-0.8
4,258,856	-		Sama_3618	0.53	-0.6
4,258,856	-		Sama_3618	0.53	-0.0
4,258,856	-		Sama_3618	0.53	+0.2
4,258,856	-		Sama_3618	0.53	+1.5
4,258,856	-		Sama_3618	0.53	-1.7
4,258,868	+		Sama_3618	0.56	+0.1
4,258,869	-		Sama_3618	0.56	+1.0
4,258,874	+		Sama_3618	0.57	-0.2
4,258,874	+		Sama_3618	0.57	-0.1
4,258,875	-		Sama_3618	0.58	-2.0
4,258,875	-		Sama_3618	0.58	+0.1
4,258,912	+		Sama_3618	0.66	-1.0
4,258,912	+		Sama_3618	0.66	-0.1
4,258,912	+		Sama_3618	0.66	-0.1
4,258,912	+		Sama_3618	0.66	-0.9
4,258,913	-		Sama_3618	0.66	-0.5
4,258,913	-		Sama_3618	0.66	-0.9
4,258,913	-		Sama_3618	0.66	+0.4
4,258,913	-		Sama_3618	0.66	-0.8
4,259,038	+				+0.2
4,259,038	+				-1.5
4,259,038	+				+0.1
4,259,038	+				-0.6
4,259,038	+				+0.7
4,259,038	+				+0.3
4,259,038	+				+1.5
4,259,038	+				-0.1
4,259,038	+				-0.5
4,259,038	+				-0.4
4,259,038	+				-0.3
4,259,038	+				+0.1
4,259,038	+				+0.4
4,259,038	+				-0.9
4,259,038	+				+0.3
4,259,038	+				+0.4
4,259,038	+				+0.4
4,259,038	+				+0.5
4,259,038	+				+0.1
4,259,038	+				+0.8
4,259,038	+				-0.5
4,259,038	+				+0.2
4,259,038	+				-0.2
4,259,038	+				-1.1
4,259,038	+				+1.3
4,259,038	+				+1.0
4,259,039	-				+0.3
4,259,039	-				+0.4
4,259,039	-				+0.4
4,259,039	-				-0.4
4,259,039	-				+0.3
4,259,039	-				+0.5
4,259,039	-				+0.8
4,259,039	-				-0.4
4,259,039	-				+0.8
4,259,039	-				+0.4
4,259,039	-				-3.0
4,259,039	-				+1.1
4,259,039	-				+1.7
4,259,039	-				-0.3
4,259,039	-				-0.4
4,259,039	-				-0.5
4,259,039	-				-0.7
4,259,039	-				-1.2
4,259,039	-				-0.4
4,259,039	-				+1.4
4,259,039	-				+1.1
4,259,039	-				+0.1
4,259,039	-				+1.4
4,259,039	-				+0.7
4,259,039	-				+1.5
4,259,039	-				+0.2
4,259,039	-				+0.0
4,259,039	-				+1.7
4,259,039	-				+0.2
4,259,190	+				+0.5
4,259,190	+				+0.5
4,259,190	+				+0.4
4,259,191	-				+0.3
4,259,194	+				-1.2
4,259,195	-				-0.0
4,259,234	+				+0.2
4,259,234	+				-0.5
4,259,234	+				-0.2
4,259,234	+				-0.3
4,259,234	+				-0.6
4,259,234	+				-0.3
4,259,234	+				-0.1
4,259,235	-				+1.2
4,259,235	-				+1.1
4,259,235	-				+0.9
4,259,235	-				-1.3
4,259,235	-				+0.2
4,259,235	-				-0.3
4,259,299	+				+0.8
4,259,299	+				+0.1
4,259,299	+				-0.4
4,259,300	-				-0.5
4,259,300	-				-1.3
4,259,300	-				-1.0
4,259,300	-				+1.1
4,259,304	+				-1.2
4,259,304	+				-0.7
4,259,305	-				-0.6
4,259,305	-				-0.3
4,259,305	-				+0.3
4,259,311	+				+0.3
4,259,323	+				+0.3
4,259,323	+				+0.4
4,259,323	+				+0.2
4,259,324	-				+0.4
4,259,324	-				+0.8
4,259,324	-				+0.3
4,259,328	+				-0.2
4,259,329	-				-1.3
4,259,402	+				-1.0
4,259,482	+		Sama_3619	0.16	-0.8
4,259,482	+		Sama_3619	0.16	-0.1
4,259,482	+		Sama_3619	0.16	-0.5
4,259,483	-		Sama_3619	0.16	+0.6
4,259,487	+		Sama_3619	0.16	+1.3
4,259,487	+		Sama_3619	0.16	-0.2
4,259,487	+		Sama_3619	0.16	+0.0
4,259,488	-		Sama_3619	0.17	+0.2
4,259,488	-		Sama_3619	0.17	+0.5
4,259,488	-		Sama_3619	0.17	-0.1
4,259,502	-		Sama_3619	0.18	-0.1
4,259,502	-		Sama_3619	0.18	+0.6
4,259,502	-		Sama_3619	0.18	+1.2
4,259,502	-		Sama_3619	0.18	+1.2
4,259,551	+		Sama_3619	0.24	-1.1
4,259,716	+		Sama_3619	0.43	+0.4
4,259,716	+		Sama_3619	0.43	+1.2
4,259,716	+		Sama_3619	0.43	+0.4
4,259,717	-		Sama_3619	0.44	-2.4
4,259,717	-		Sama_3619	0.44	-0.3
4,259,812	+		Sama_3619	0.55	+2.6
4,259,826	+		Sama_3619	0.56	-0.3
4,259,827	-		Sama_3619	0.57	+0.6
4,259,827	-		Sama_3619	0.57	-0.7
4,259,876	+		Sama_3619	0.62	+0.5
4,259,876	+		Sama_3619	0.62	+0.0
4,259,876	+		Sama_3619	0.62	+0.1
4,259,876	+		Sama_3619	0.62	+0.7
4,259,877	-		Sama_3619	0.62	+3.0
4,259,877	-		Sama_3619	0.62	-0.1
4,259,877	-		Sama_3619	0.62	-0.9
4,259,877	-		Sama_3619	0.62	-0.9
4,259,877	-		Sama_3619	0.62	-1.1
4,259,877	-		Sama_3619	0.62	+2.1
4,259,877	-		Sama_3619	0.62	-0.4
4,259,915	+		Sama_3619	0.67	-0.4
4,259,916	-		Sama_3619	0.67	-0.8
4,259,943	-		Sama_3619	0.70	-0.3
4,259,974	+		Sama_3619	0.74	-1.2
4,259,977	-		Sama_3619	0.74	-0.4
4,260,008	+		Sama_3619	0.78	-0.4
4,260,009	-		Sama_3619	0.78	-1.0
4,260,009	-		Sama_3619	0.78	-0.7
4,260,029	+		Sama_3619	0.80	+0.3
4,260,029	+		Sama_3619	0.80	+0.0
4,260,029	+		Sama_3619	0.80	+0.0
4,260,029	+		Sama_3619	0.80	-0.9
4,260,029	+		Sama_3619	0.80	-0.0
4,260,029	+		Sama_3619	0.80	-1.1
4,260,029	+		Sama_3619	0.80	+0.3
4,260,029	+		Sama_3619	0.80	+0.7
4,260,029	+		Sama_3619	0.80	+0.2
4,260,030	-		Sama_3619	0.80	+2.8
4,260,030	-		Sama_3619	0.80	+0.1
4,260,030	-		Sama_3619	0.80	+0.5
4,260,030	-		Sama_3619	0.80	-1.8
4,260,030	-		Sama_3619	0.80	+0.1
4,260,030	-		Sama_3619	0.80	+1.1
4,260,035	+		Sama_3619	0.81	+1.1
4,260,035	+		Sama_3619	0.81	+0.3
4,260,035	+		Sama_3619	0.81	+0.7
4,260,035	+		Sama_3619	0.81	+0.4
4,260,036	-		Sama_3619	0.81	+0.2
4,260,036	-		Sama_3619	0.81	-1.8
4,260,036	-		Sama_3619	0.81	-1.1