Strain Fitness in Shewanella amazonensis SB2B around Sama_3570

Experiment: Ammonium chloride (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ammonium chloride (N)
4,204,975	+		Sama_3569	0.61	-1.1
4,204,975	+		Sama_3569	0.61	+1.1
4,204,976	-		Sama_3569	0.61	+0.5
4,204,976	-		Sama_3569	0.61	+1.0
4,204,976	-		Sama_3569	0.61	-0.2
4,205,045	-		Sama_3569	0.64	-1.5
4,205,045	-		Sama_3569	0.64	-0.4
4,205,096	+		Sama_3569	0.67	+1.2
4,205,096	+		Sama_3569	0.67	+0.5
4,205,096	+		Sama_3569	0.67	+1.0
4,205,096	+		Sama_3569	0.67	+0.8
4,205,097	-		Sama_3569	0.67	-0.0
4,205,097	-		Sama_3569	0.67	-0.7
4,205,097	-		Sama_3569	0.67	-0.2
4,205,186	+		Sama_3569	0.71	+0.2
4,205,186	+		Sama_3569	0.71	+0.5
4,205,186	+		Sama_3569	0.71	-0.0
4,205,186	+		Sama_3569	0.71	-0.4
4,205,187	-		Sama_3569	0.71	+0.4
4,205,187	-		Sama_3569	0.71	-0.6
4,205,187	-		Sama_3569	0.71	-0.6
4,205,187	-		Sama_3569	0.71	-1.6
4,205,187	-		Sama_3569	0.71	+0.2
4,205,187	-		Sama_3569	0.71	+0.4
4,205,187	-		Sama_3569	0.71	-2.6
4,205,224	+		Sama_3569	0.73	+1.2
4,205,252	+		Sama_3569	0.74	-0.5
4,205,252	+		Sama_3569	0.74	+0.2
4,205,252	+		Sama_3569	0.74	+1.4
4,205,253	-		Sama_3569	0.74	-0.8
4,205,253	-		Sama_3569	0.74	+0.8
4,205,253	-		Sama_3569	0.74	+0.8
4,205,279	-		Sama_3569	0.75	+0.0
4,205,279	-		Sama_3569	0.75	-1.1
4,205,288	-		Sama_3569	0.76	+1.3
4,205,288	-		Sama_3569	0.76	-0.0
4,205,311	+		Sama_3569	0.77	-2.1
4,205,311	+		Sama_3569	0.77	+0.2
4,205,386	+		Sama_3569	0.80	+0.1
4,205,387	-		Sama_3569	0.80	+0.6
4,205,390	+		Sama_3569	0.80	-0.7
4,205,390	+		Sama_3569	0.80	+1.3
4,205,390	+		Sama_3569	0.80	-0.5
4,205,390	+		Sama_3569	0.80	-1.5
4,205,390	+		Sama_3569	0.80	-0.4
4,205,390	+		Sama_3569	0.80	+0.4
4,205,390	+		Sama_3569	0.80	+1.4
4,205,390	+		Sama_3569	0.80	+0.8
4,205,391	-		Sama_3569	0.80	-0.2
4,205,391	-		Sama_3569	0.80	+1.3
4,205,391	-		Sama_3569	0.80	+0.5
4,205,434	+		Sama_3569	0.82	+0.4
4,205,435	-		Sama_3569	0.82	-0.3
4,205,455	+		Sama_3569	0.83	-0.4
4,205,480	+		Sama_3569	0.84	-2.5
4,205,481	-		Sama_3569	0.84	-0.2
4,205,537	+		Sama_3569	0.87	+1.6
4,205,537	+		Sama_3569	0.87	+0.6
4,205,537	+		Sama_3569	0.87	-2.0
4,205,538	-		Sama_3569	0.87	-0.4
4,205,538	-		Sama_3569	0.87	-2.0
4,205,538	-		Sama_3569	0.87	+0.0
4,205,538	-		Sama_3569	0.87	+0.8
4,205,548	+		Sama_3569	0.87	+0.9
4,205,549	-		Sama_3569	0.88	-0.4
4,205,549	-		Sama_3569	0.88	+0.4
4,205,570	+		Sama_3569	0.88	+0.4
4,205,570	+		Sama_3569	0.88	+0.2
4,205,570	+		Sama_3569	0.88	+1.0
4,205,570	+		Sama_3569	0.88	-0.6
4,205,571	-		Sama_3569	0.89	-0.9
4,205,571	-		Sama_3569	0.89	+0.2
4,205,679	+				-1.1
4,205,711	+				-0.2
4,205,711	+				-0.8
4,205,711	+				+0.6
4,205,711	+				+1.7
4,205,711	+				+0.8
4,205,711	+				-2.4
4,205,712	-				-0.3
4,205,712	-				-0.5
4,205,712	-				-0.5
4,205,777	+				-0.8
4,205,777	+				-0.5
4,205,777	+				+0.4
4,205,778	-				+0.2
4,205,778	-				+0.7
4,205,778	-				+1.0
4,205,779	+				+0.7
4,205,779	+				+1.1
4,205,779	+				-0.8
4,205,779	+				+0.1
4,205,819	+				+0.5
4,205,820	-				-0.1
4,205,820	-				-0.8
4,205,820	-				+0.4
4,205,869	+				+0.1
4,205,869	+				-0.4
4,205,886	+				+0.3
4,205,886	+				-0.3
4,205,886	+				-0.3
4,205,887	-				+0.0
4,205,903	-				+0.9
4,206,010	-		Sama_3570	0.12	-1.8
4,206,010	-		Sama_3570	0.12	-0.8
4,206,032	+		Sama_3570	0.18	+0.1
4,206,038	+		Sama_3570	0.19	-2.1
4,206,038	+		Sama_3570	0.19	+1.6
4,206,038	+		Sama_3570	0.19	-1.8
4,206,039	-		Sama_3570	0.19	-0.6
4,206,117	+		Sama_3570	0.39	-0.9
4,206,117	+		Sama_3570	0.39	+1.0
4,206,117	+		Sama_3570	0.39	-1.4
4,206,118	-		Sama_3570	0.39	-0.8
4,206,118	-		Sama_3570	0.39	-1.5
4,206,161	+		Sama_3570	0.50	+0.2
4,206,161	+		Sama_3570	0.50	-0.2
4,206,162	-		Sama_3570	0.50	-0.2
4,206,162	-		Sama_3570	0.50	+0.0
4,206,162	-		Sama_3570	0.50	+0.5
4,206,162	-		Sama_3570	0.50	+0.6
4,206,164	+		Sama_3570	0.51	+0.5
4,206,164	+		Sama_3570	0.51	+0.0
4,206,164	+		Sama_3570	0.51	-0.1
4,206,164	+		Sama_3570	0.51	-0.3
4,206,164	+		Sama_3570	0.51	-0.7
4,206,164	+		Sama_3570	0.51	+0.7
4,206,165	-		Sama_3570	0.51	-2.1
4,206,165	-		Sama_3570	0.51	+0.2
4,206,190	-		Sama_3570	0.57	-0.8
4,206,190	-		Sama_3570	0.57	-0.2
4,206,190	-		Sama_3570	0.57	-2.4
4,206,294	+		Sama_3570	0.83	-1.6
4,206,294	+		Sama_3570	0.83	+0.5
4,206,294	+		Sama_3570	0.83	-1.2
4,206,295	-		Sama_3570	0.83	-0.6
4,206,295	-		Sama_3570	0.83	-0.7
4,206,301	-		Sama_3570	0.85	-1.8
4,206,301	-		Sama_3570	0.85	-0.9
4,206,360	+				-0.1
4,206,360	+				+0.6
4,206,360	+				+0.9
4,206,361	-				-1.4
4,206,361	-				+0.6
4,206,391	+				-0.7
4,206,392	-				+0.0
4,206,393	+				+0.7
4,206,406	+				+1.8
4,206,406	+				-0.6
4,206,406	+				+1.2
4,206,406	+				-0.5
4,206,407	-				-1.4
4,206,407	-				+0.5
4,206,407	-				+0.8
4,206,408	+				+0.6
4,206,409	-				-0.2
4,206,409	-				+0.9
4,206,419	+				-0.3
4,206,420	-				-0.3
4,206,420	-				+0.0
4,206,463	+				+0.2
4,206,468	+				+0.9
4,206,468	+				-2.3
4,206,468	+				+0.2
4,206,469	-				+0.4
4,206,469	-				+0.2
4,206,469	-				+1.1
4,206,469	-				-0.5
4,206,469	-				+0.2
4,206,486	+				+0.1
4,206,486	+				+0.9
4,206,486	+				+1.2
4,206,486	+				+0.0
4,206,486	+				-0.8
4,206,487	-				+0.4
4,206,487	-				+0.6
4,206,487	-				-0.6
4,206,487	-				-1.8
4,206,487	-				-0.9
4,206,487	-				-1.2
4,206,510	+				+0.1
4,206,510	+				+0.5
4,206,510	+				+1.5
4,206,510	+				-0.6
4,206,510	+				+0.4
4,206,510	+				+0.5
4,206,511	-				+0.1
4,206,511	-				+0.8
4,206,511	-				-1.2
4,206,511	-				+0.0
4,206,511	-				+0.2
4,206,514	+				-0.1
4,206,514	+				-1.2
4,206,514	+				-0.2
4,206,514	+				-2.2
4,206,514	+				-1.9
4,206,514	+				+0.5
4,206,515	-				+0.2
4,206,519	+				+0.9
4,206,520	-				+1.0
4,206,520	-				+0.9
4,206,520	-				-1.0
4,206,520	-				-0.9
4,206,520	-				-0.0
4,206,520	-				+0.2
4,206,542	+				-2.1
4,206,542	+				+1.4
4,206,547	+				+0.6
4,206,547	+				+0.1
4,206,553	+				+1.5
4,206,553	+				-0.4
4,206,553	+				-1.3
4,206,554	-				+0.6
4,206,554	-				+3.0
4,206,706	-		Sama_3571	0.13	-1.6
4,206,706	-		Sama_3571	0.13	-2.6
4,206,747	+		Sama_3571	0.15	+0.2
4,206,747	+		Sama_3571	0.15	-0.2
4,206,748	-		Sama_3571	0.15	+1.3
4,206,748	-		Sama_3571	0.15	-1.5
4,206,774	+		Sama_3571	0.17	-0.4
4,206,774	+		Sama_3571	0.17	+0.4
4,206,775	-		Sama_3571	0.17	-0.4
4,206,775	-		Sama_3571	0.17	-0.1
4,206,775	-		Sama_3571	0.17	-0.0
4,206,775	-		Sama_3571	0.17	-0.4
4,206,775	-		Sama_3571	0.17	-0.0
4,206,775	-		Sama_3571	0.17	+0.9
4,206,775	-		Sama_3571	0.17	-2.2
4,206,775	-		Sama_3571	0.17	-0.6
4,206,775	-		Sama_3571	0.17	-0.2
4,206,809	+		Sama_3571	0.19	+0.3
4,206,810	-		Sama_3571	0.19	-0.5
4,206,810	-		Sama_3571	0.19	-0.4
4,206,810	-		Sama_3571	0.19	+0.1
4,206,810	-		Sama_3571	0.19	-0.3
4,206,810	-		Sama_3571	0.19	-1.0
4,206,810	-		Sama_3571	0.19	-0.3
4,206,810	-		Sama_3571	0.19	+0.2
4,206,811	+		Sama_3571	0.19	+1.0
4,206,811	+		Sama_3571	0.19	+0.9
4,206,812	-		Sama_3571	0.19	-1.4
4,206,856	+		Sama_3571	0.21	+1.1
4,206,857	-		Sama_3571	0.21	-0.2
4,206,857	-		Sama_3571	0.21	-1.0
4,206,858	+		Sama_3571	0.21	-0.5
4,206,858	+		Sama_3571	0.21	+0.8
4,206,858	+		Sama_3571	0.21	+0.2
4,206,858	+		Sama_3571	0.21	-1.0
4,206,858	+		Sama_3571	0.21	-0.3
4,206,858	+		Sama_3571	0.21	+0.4
4,206,858	+		Sama_3571	0.21	+0.2
4,206,858	+		Sama_3571	0.21	+0.3
4,206,859	-		Sama_3571	0.21	+0.8
4,206,859	-		Sama_3571	0.21	+0.2
4,206,859	-		Sama_3571	0.21	-1.8
4,206,859	-		Sama_3571	0.21	-0.2
4,206,859	-		Sama_3571	0.21	-0.4
4,206,868	+		Sama_3571	0.22	+0.6
4,206,869	-		Sama_3571	0.22	-0.8
4,206,869	-		Sama_3571	0.22	+0.8
4,206,904	+		Sama_3571	0.24	+0.1
4,206,905	-		Sama_3571	0.24	+0.1
4,206,905	-		Sama_3571	0.24	+0.1
4,206,905	-		Sama_3571	0.24	-0.2
4,206,949	+		Sama_3571	0.26	-0.6
4,206,950	-		Sama_3571	0.26	-0.2
4,206,979	+		Sama_3571	0.28	-1.8
4,206,979	+		Sama_3571	0.28	-0.2
4,206,979	+		Sama_3571	0.28	+1.4
4,206,980	-		Sama_3571	0.28	-2.0
4,206,996	+		Sama_3571	0.29	-2.3
4,206,996	+		Sama_3571	0.29	+0.1
4,206,996	+		Sama_3571	0.29	+0.5
4,206,997	-		Sama_3571	0.29	-0.0
4,206,997	-		Sama_3571	0.29	-0.3
4,206,997	-		Sama_3571	0.29	-0.9
4,206,997	-		Sama_3571	0.29	-0.1
4,206,997	-		Sama_3571	0.29	+0.1
4,206,997	-		Sama_3571	0.29	-0.6
4,206,997	-		Sama_3571	0.29	+0.0
4,206,997	-		Sama_3571	0.29	-0.1
4,206,999	+		Sama_3571	0.29	-0.7
4,207,084	+		Sama_3571	0.34	+0.3
4,207,085	-		Sama_3571	0.34	-0.3
4,207,085	-		Sama_3571	0.34	-0.9
4,207,085	-		Sama_3571	0.34	+0.5
4,207,085	-		Sama_3571	0.34	-0.1
4,207,111	+		Sama_3571	0.35	+1.4
4,207,112	-		Sama_3571	0.35	-0.8
4,207,150	-		Sama_3571	0.38	-0.8
4,207,150	-		Sama_3571	0.38	-1.3
4,207,150	-		Sama_3571	0.38	+0.4
4,207,157	+		Sama_3571	0.38	+1.2
4,207,158	-		Sama_3571	0.38	-0.3
4,207,158	-		Sama_3571	0.38	-1.3
4,207,158	-		Sama_3571	0.38	+0.6
4,207,158	-		Sama_3571	0.38	+0.2
4,207,158	-		Sama_3571	0.38	+0.3
4,207,173	-		Sama_3571	0.39	+0.1
4,207,229	-		Sama_3571	0.42	-0.9
4,207,279	+		Sama_3571	0.45	+1.5