Strain Fitness in Shewanella amazonensis SB2B around Sama_1645

Experiment: Ammonium chloride (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ammonium chloride (N)
2,009,909	+		Sama_1644	0.33	+0.9
2,009,929	+		Sama_1644	0.35	-0.8
2,009,929	+		Sama_1644	0.35	-0.5
2,009,929	+		Sama_1644	0.35	+0.8
2,009,930	-		Sama_1644	0.35	+0.5
2,009,930	-		Sama_1644	0.35	-0.9
2,009,930	-		Sama_1644	0.35	+0.4
2,009,933	+		Sama_1644	0.35	-1.5
2,009,933	+		Sama_1644	0.35	+0.0
2,009,933	+		Sama_1644	0.35	-1.0
2,009,934	-		Sama_1644	0.36	+0.1
2,009,934	-		Sama_1644	0.36	+0.0
2,009,976	+		Sama_1644	0.39	+0.1
2,009,976	+		Sama_1644	0.39	+0.8
2,009,976	+		Sama_1644	0.39	-0.7
2,009,976	+		Sama_1644	0.39	+0.2
2,009,976	+		Sama_1644	0.39	-0.9
2,009,977	-		Sama_1644	0.39	-0.5
2,009,977	-		Sama_1644	0.39	-0.4
2,009,985	+		Sama_1644	0.40	-0.2
2,009,986	-		Sama_1644	0.40	-0.9
2,009,986	-		Sama_1644	0.40	-0.3
2,010,055	+		Sama_1644	0.46	-0.3
2,010,073	+		Sama_1644	0.47	-0.4
2,010,073	+		Sama_1644	0.47	-0.6
2,010,074	-		Sama_1644	0.47	-1.9
2,010,092	-		Sama_1644	0.49	+0.1
2,010,122	+		Sama_1644	0.51	+0.3
2,010,122	+		Sama_1644	0.51	-1.2
2,010,123	-		Sama_1644	0.52	-0.9
2,010,126	+		Sama_1644	0.52	-0.1
2,010,126	+		Sama_1644	0.52	-0.2
2,010,126	+		Sama_1644	0.52	+0.4
2,010,127	-		Sama_1644	0.52	+0.6
2,010,127	-		Sama_1644	0.52	+0.1
2,010,127	-		Sama_1644	0.52	-0.5
2,010,127	-		Sama_1644	0.52	+0.1
2,010,127	-		Sama_1644	0.52	-0.3
2,010,205	+		Sama_1644	0.58	-0.5
2,010,205	+		Sama_1644	0.58	-0.7
2,010,205	+		Sama_1644	0.58	-0.5
2,010,205	+		Sama_1644	0.58	-0.2
2,010,206	-		Sama_1644	0.59	+0.7
2,010,206	-		Sama_1644	0.59	+1.2
2,010,206	-		Sama_1644	0.59	+1.5
2,010,209	+		Sama_1644	0.59	+0.1
2,010,209	+		Sama_1644	0.59	-0.4
2,010,209	+		Sama_1644	0.59	+0.3
2,010,209	+		Sama_1644	0.59	-1.4
2,010,209	+		Sama_1644	0.59	-0.6
2,010,210	-		Sama_1644	0.59	-1.6
2,010,210	-		Sama_1644	0.59	+0.0
2,010,211	+		Sama_1644	0.59	-1.5
2,010,211	+		Sama_1644	0.59	+0.0
2,010,211	+		Sama_1644	0.59	+0.1
2,010,211	+		Sama_1644	0.59	-0.5
2,010,211	+		Sama_1644	0.59	+1.1
2,010,211	+		Sama_1644	0.59	-2.7
2,010,211	+		Sama_1644	0.59	-0.7
2,010,211	+		Sama_1644	0.59	-0.5
2,010,212	-		Sama_1644	0.59	+0.1
2,010,212	-		Sama_1644	0.59	+0.1
2,010,212	-		Sama_1644	0.59	+0.1
2,010,212	-		Sama_1644	0.59	+0.3
2,010,212	-		Sama_1644	0.59	-1.5
2,010,212	-		Sama_1644	0.59	+0.6
2,010,215	+		Sama_1644	0.59	-0.4
2,010,215	+		Sama_1644	0.59	+0.4
2,010,215	+		Sama_1644	0.59	-1.0
2,010,216	-		Sama_1644	0.59	-0.4
2,010,222	+		Sama_1644	0.60	+0.7
2,010,222	+		Sama_1644	0.60	+0.1
2,010,222	+		Sama_1644	0.60	+0.3
2,010,222	+		Sama_1644	0.60	-0.8
2,010,222	+		Sama_1644	0.60	+1.7
2,010,223	-		Sama_1644	0.60	-0.3
2,010,250	+		Sama_1644	0.62	+0.4
2,010,250	+		Sama_1644	0.62	-0.8
2,010,250	+		Sama_1644	0.62	-0.2
2,010,250	+		Sama_1644	0.62	-1.5
2,010,292	+		Sama_1644	0.66	+0.6
2,010,292	+		Sama_1644	0.66	-2.5
2,010,293	-		Sama_1644	0.66	+1.3
2,010,313	-		Sama_1644	0.68	-0.2
2,010,323	-		Sama_1644	0.68	+0.1
2,010,366	-		Sama_1644	0.72	+0.1
2,010,387	+		Sama_1644	0.74	+1.0
2,010,387	+		Sama_1644	0.74	-0.7
2,010,412	+		Sama_1644	0.76	+0.3
2,010,421	+		Sama_1644	0.77	+1.3
2,010,421	+		Sama_1644	0.77	-1.8
2,010,445	+		Sama_1644	0.79	-0.2
2,010,445	+		Sama_1644	0.79	+0.0
2,010,445	+		Sama_1644	0.79	+1.3
2,010,446	-		Sama_1644	0.79	-1.3
2,010,446	-		Sama_1644	0.79	-2.5
2,010,531	-		Sama_1644	0.86	-0.4
2,010,684	-				+0.3
2,010,684	-				-0.1
2,010,684	-				+0.5
2,010,687	+				-2.0
2,010,688	-				+0.4
2,010,701	-				-0.1
2,010,709	+				-0.6
2,010,709	+				+0.6
2,010,709	+				-0.1
2,010,709	+				+0.7
2,010,709	+				+0.1
2,010,709	+				-0.6
2,010,709	+				+0.5
2,010,709	+				+0.5
2,010,922	+		Sama_1645	0.11	+0.6
2,010,922	+		Sama_1645	0.11	+0.3
2,010,923	-		Sama_1645	0.11	-0.9
2,010,923	-		Sama_1645	0.11	+0.1
2,010,963	+		Sama_1645	0.16	-0.8
2,010,963	+		Sama_1645	0.16	+0.5
2,010,964	-		Sama_1645	0.16	-0.9
2,010,975	-		Sama_1645	0.17	-0.1
2,011,013	+		Sama_1645	0.22	-0.7
2,011,048	+		Sama_1645	0.26	-0.7
2,011,097	-		Sama_1645	0.32	+0.1
2,011,181	+		Sama_1645	0.42	-0.2
2,011,181	+		Sama_1645	0.42	+0.6
2,011,181	+		Sama_1645	0.42	+0.2
2,011,190	+		Sama_1645	0.43	+1.0
2,011,190	+		Sama_1645	0.43	-1.0
2,011,190	+		Sama_1645	0.43	+0.5
2,011,190	+		Sama_1645	0.43	-1.7
2,011,191	-		Sama_1645	0.43	-0.4
2,011,191	-		Sama_1645	0.43	-0.1
2,011,191	-		Sama_1645	0.43	-0.4
2,011,191	-		Sama_1645	0.43	+0.1
2,011,191	-		Sama_1645	0.43	-0.4
2,011,245	+		Sama_1645	0.50	+0.0
2,011,245	+		Sama_1645	0.50	+0.3
2,011,355	+		Sama_1645	0.63	+0.4
2,011,356	-		Sama_1645	0.63	-0.6
2,011,356	-		Sama_1645	0.63	-0.6
2,011,441	+		Sama_1645	0.73	+0.5
2,011,441	+		Sama_1645	0.73	+0.1
2,011,543	+		Sama_1645	0.86	+0.0
2,011,557	+		Sama_1645	0.87	-2.8
2,011,558	-		Sama_1645	0.88	+0.4
2,011,558	-		Sama_1645	0.88	-0.7
2,011,608	-				+0.2
2,011,685	+				+0.0
2,011,685	+				+0.6
2,011,715	-				-3.2
2,011,723	-		Sama_1646	0.11	+0.2
2,011,723	-		Sama_1646	0.11	+0.9
2,011,751	+		Sama_1646	0.15	-2.3
2,011,751	+		Sama_1646	0.15	-2.5
2,011,757	+		Sama_1646	0.16	-2.9
2,011,766	+		Sama_1646	0.18	-1.7
2,011,848	-		Sama_1646	0.31	-1.2
2,011,966	+		Sama_1646	0.49	-3.7
2,012,079	+		Sama_1646	0.67	-2.7
2,012,079	+		Sama_1646	0.67	-0.7
2,012,080	-		Sama_1646	0.67	-4.0
2,012,080	-		Sama_1646	0.67	-2.7
2,012,088	+		Sama_1646	0.68	-2.5
2,012,088	+		Sama_1646	0.68	-2.7
2,012,091	+		Sama_1646	0.69	-1.0
2,012,092	-		Sama_1646	0.69	-3.4
2,012,092	-		Sama_1646	0.69	-2.5
2,012,092	-		Sama_1646	0.69	-2.7
2,012,092	-		Sama_1646	0.69	-1.7
2,012,229	-				-2.3
2,012,336	-				+0.1
2,012,336	-				-2.7