Experiment: Xylitol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0967 and Dshi_0968 are separated by 96 nucleotides Dshi_0968 and Dshi_0969 overlap by 38 nucleotides
Dshi_0967: Dshi_0967 - fumarylacetoacetate (FAA) hydrolase (RefSeq), at 989,049 to 989,933
_0967
Dshi_0968: Dshi_0968 - YCII-related (RefSeq), at 990,030 to 990,485
_0968
Dshi_0969: Dshi_0969 - Mannitol dehydrogenase domain (RefSeq), at 990,448 to 991,947
_0969
Position (kb) 990
991 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 989.090 kb on + strand at 989.097 kb on + strand at 989.115 kb on - strand at 989.237 kb on + strand, within Dshi_0967 at 989.256 kb on + strand, within Dshi_0967 at 989.256 kb on + strand, within Dshi_0967 at 989.256 kb on + strand, within Dshi_0967 at 989.256 kb on + strand, within Dshi_0967 at 989.264 kb on - strand, within Dshi_0967 at 989.264 kb on - strand, within Dshi_0967 at 989.322 kb on + strand, within Dshi_0967 at 989.332 kb on - strand, within Dshi_0967 at 989.419 kb on + strand, within Dshi_0967 at 989.439 kb on - strand, within Dshi_0967 at 989.552 kb on - strand, within Dshi_0967 at 989.605 kb on + strand, within Dshi_0967 at 989.623 kb on - strand, within Dshi_0967 at 989.636 kb on + strand, within Dshi_0967 at 989.636 kb on + strand, within Dshi_0967 at 989.636 kb on + strand, within Dshi_0967 at 989.644 kb on - strand, within Dshi_0967 at 989.688 kb on + strand, within Dshi_0967 at 989.693 kb on + strand, within Dshi_0967 at 989.696 kb on - strand, within Dshi_0967 at 989.696 kb on - strand, within Dshi_0967 at 989.696 kb on - strand, within Dshi_0967 at 989.696 kb on - strand, within Dshi_0967 at 989.750 kb on - strand, within Dshi_0967 at 990.089 kb on + strand, within Dshi_0968 at 990.097 kb on - strand, within Dshi_0968 at 990.241 kb on + strand, within Dshi_0968 at 990.293 kb on + strand, within Dshi_0968 at 990.316 kb on + strand, within Dshi_0968 at 990.331 kb on + strand, within Dshi_0968 at 990.366 kb on + strand, within Dshi_0968 at 990.478 kb on + strand at 990.523 kb on + strand at 990.742 kb on + strand, within Dshi_0969 at 990.996 kb on - strand, within Dshi_0969 at 991.086 kb on - strand, within Dshi_0969 at 991.286 kb on + strand, within Dshi_0969 at 991.313 kb on - strand, within Dshi_0969 at 991.315 kb on + strand, within Dshi_0969
Per-strain Table
Position Strand Gene LocusTag Fraction Xylitol (C) remove 989,090 + -1.5 989,097 + -2.7 989,115 - +1.2 989,237 + Dshi_0967 0.21 +0.3 989,256 + Dshi_0967 0.23 -0.8 989,256 + Dshi_0967 0.23 -0.0 989,256 + Dshi_0967 0.23 +0.0 989,256 + Dshi_0967 0.23 -0.9 989,264 - Dshi_0967 0.24 +0.2 989,264 - Dshi_0967 0.24 +0.2 989,322 + Dshi_0967 0.31 -0.2 989,332 - Dshi_0967 0.32 -0.6 989,419 + Dshi_0967 0.42 +0.1 989,439 - Dshi_0967 0.44 -0.5 989,552 - Dshi_0967 0.57 -0.2 989,605 + Dshi_0967 0.63 -1.6 989,623 - Dshi_0967 0.65 -2.7 989,636 + Dshi_0967 0.66 -0.9 989,636 + Dshi_0967 0.66 +0.4 989,636 + Dshi_0967 0.66 -0.6 989,644 - Dshi_0967 0.67 +0.2 989,688 + Dshi_0967 0.72 -0.2 989,693 + Dshi_0967 0.73 +0.3 989,696 - Dshi_0967 0.73 +0.4 989,696 - Dshi_0967 0.73 -0.8 989,696 - Dshi_0967 0.73 +0.7 989,696 - Dshi_0967 0.73 -1.0 989,750 - Dshi_0967 0.79 +0.3 990,089 + Dshi_0968 0.13 -0.2 990,097 - Dshi_0968 0.15 +0.5 990,241 + Dshi_0968 0.46 +0.5 990,293 + Dshi_0968 0.58 +0.4 990,316 + Dshi_0968 0.63 -0.6 990,331 + Dshi_0968 0.66 -0.4 990,366 + Dshi_0968 0.74 -3.3 990,478 + +0.3 990,523 + +1.3 990,742 + Dshi_0969 0.20 +1.3 990,996 - Dshi_0969 0.37 +1.6 991,086 - Dshi_0969 0.43 +1.5 991,286 + Dshi_0969 0.56 +1.9 991,313 - Dshi_0969 0.58 +1.5 991,315 + Dshi_0969 0.58 +2.4
Or see this region's nucleotide sequence