Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c19370

Experiment: D-Lactate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Lactate (C)
2,015,076	-		PGA1_c19360	0.46	-1.2
2,015,078	+		PGA1_c19360	0.46	+0.2
2,015,081	-		PGA1_c19360	0.46	-0.6
2,015,082	+		PGA1_c19360	0.46	+0.1
2,015,082	+		PGA1_c19360	0.46	+0.5
2,015,082	+		PGA1_c19360	0.46	-0.2
2,015,090	-		PGA1_c19360	0.47	+0.4
2,015,090	-		PGA1_c19360	0.47	-0.0
2,015,090	-		PGA1_c19360	0.47	+1.1
2,015,090	-		PGA1_c19360	0.47	-0.8
2,015,101	+		PGA1_c19360	0.47	+0.8
2,015,129	+		PGA1_c19360	0.49	+1.5
2,015,170	-		PGA1_c19360	0.51	+0.2
2,015,171	-		PGA1_c19360	0.51	+0.6
2,015,177	+		PGA1_c19360	0.52	+0.9
2,015,191	-		PGA1_c19360	0.52	-0.3
2,015,274	+		PGA1_c19360	0.57	-0.8
2,015,318	+		PGA1_c19360	0.59	+1.1
2,015,318	-		PGA1_c19360	0.59	+2.0
2,015,323	+		PGA1_c19360	0.60	-0.3
2,015,323	+		PGA1_c19360	0.60	-0.6
2,015,326	-		PGA1_c19360	0.60	-1.7
2,015,331	-		PGA1_c19360	0.60	-2.2
2,015,362	-		PGA1_c19360	0.62	+1.1
2,015,410	+		PGA1_c19360	0.65	-2.0
2,015,471	-		PGA1_c19360	0.68	+1.3
2,015,499	+		PGA1_c19360	0.69	-0.6
2,015,501	-		PGA1_c19360	0.70	+2.4
2,015,520	+		PGA1_c19360	0.71	-1.8
2,015,545	-		PGA1_c19360	0.72	-0.6
2,015,548	+		PGA1_c19360	0.72	+0.2
2,015,556	-		PGA1_c19360	0.73	+0.2
2,015,592	-		PGA1_c19360	0.75	+1.0
2,015,634	+		PGA1_c19360	0.77	-1.3
2,015,637	+		PGA1_c19360	0.77	+0.4
2,015,637	+		PGA1_c19360	0.77	-0.6
2,015,637	+		PGA1_c19360	0.77	-0.2
2,015,639	+		PGA1_c19360	0.77	-0.3
2,015,645	-		PGA1_c19360	0.78	-1.7
2,015,684	-		PGA1_c19360	0.80	+0.3
2,015,735	+		PGA1_c19360	0.83	+0.4
2,015,735	-		PGA1_c19360	0.83	-1.3
2,015,743	-		PGA1_c19360	0.83	-0.2
2,015,755	+		PGA1_c19360	0.84	-0.5
2,015,773	-		PGA1_c19360	0.85	-0.6
2,015,807	-		PGA1_c19360	0.86	-1.3
2,015,812	+		PGA1_c19360	0.87	+0.1
2,015,841	-		PGA1_c19360	0.88	-0.2
2,015,858	+		PGA1_c19360	0.89	+0.2
2,015,858	+		PGA1_c19360	0.89	+0.6
2,015,858	+		PGA1_c19360	0.89	-1.8
2,015,858	+		PGA1_c19360	0.89	+0.7
2,015,861	-		PGA1_c19360	0.89	+1.0
2,015,866	-		PGA1_c19360	0.90	-1.3
2,015,866	-		PGA1_c19360	0.90	+0.2
2,015,866	-		PGA1_c19360	0.90	+1.5
2,015,866	-		PGA1_c19360	0.90	-0.6
2,015,866	-		PGA1_c19360	0.90	-0.1
2,015,866	-		PGA1_c19360	0.90	-0.3
2,015,871	+				+1.6
2,015,903	+				-1.6
2,015,946	+				+0.7
2,015,946	+				+0.4
2,015,946	+				+0.7
2,015,998	-				+1.0
2,016,016	+				-0.4
2,016,027	+				-0.2
2,016,027	+				-1.6
2,016,035	-				-1.2
2,016,035	-				+0.6
2,016,053	+				+0.8
2,016,053	+				-0.5
2,016,053	+				-0.2
2,016,053	+				-1.0
2,016,058	+				-0.7
2,016,065	+				-2.5
2,016,066	-				+0.7
2,016,071	-				-0.3
2,016,072	+				+0.2
2,016,080	-				+1.0
2,016,115	+				-0.3
2,016,174	+		PGA1_c19370	0.15	+0.2
2,016,174	+		PGA1_c19370	0.15	+0.3
2,016,176	+		PGA1_c19370	0.15	+0.4
2,016,184	-		PGA1_c19370	0.16	+0.4
2,016,267	-		PGA1_c19370	0.27	+0.4
2,016,308	+		PGA1_c19370	0.32	-0.6
2,016,308	+		PGA1_c19370	0.32	+1.4
2,016,323	+		PGA1_c19370	0.34	-2.3
2,016,331	-		PGA1_c19370	0.35	-0.2
2,016,331	-		PGA1_c19370	0.35	+0.2
2,016,340	+		PGA1_c19370	0.36	+1.8
2,016,340	+		PGA1_c19370	0.36	-0.3
2,016,340	+		PGA1_c19370	0.36	+0.1
2,016,348	-		PGA1_c19370	0.37	+1.1
2,016,428	+		PGA1_c19370	0.48	-0.0
2,016,442	+		PGA1_c19370	0.50	-1.2
2,016,497	-		PGA1_c19370	0.57	+1.5
2,016,507	-		PGA1_c19370	0.58	-1.3
2,016,519	+		PGA1_c19370	0.60	+1.0
2,016,576	+		PGA1_c19370	0.67	-0.6
2,016,589	+		PGA1_c19370	0.69	+1.8
2,016,597	-		PGA1_c19370	0.70	-0.3
2,016,597	-		PGA1_c19370	0.70	-1.1
2,016,607	+		PGA1_c19370	0.71	-0.1
2,016,607	+		PGA1_c19370	0.71	+0.1
2,016,642	-		PGA1_c19370	0.76	+1.3
2,016,700	+		PGA1_c19370	0.83	+1.6
2,016,748	+		PGA1_c19370	0.90	+0.4
2,016,840	-				+1.0
2,016,861	+				-1.7
2,016,866	+				+0.4
2,016,869	-				+0.1
2,016,871	+				-1.8
2,016,884	+				-1.1
2,016,930	+				+0.1
2,016,930	+				-1.4
2,016,937	+				+0.2
2,016,938	-				+0.4
2,016,938	-				-0.8
2,016,938	-				-0.2
2,016,938	-				-0.8
2,016,938	-				+1.8
2,016,938	-				-1.7
2,016,938	-				-1.2
2,016,938	-				+1.1
2,016,955	-				-0.1
2,016,978	-		PGA1_c19380	0.11	+0.2
2,016,979	+		PGA1_c19380	0.12	+0.9
2,016,979	+		PGA1_c19380	0.12	-0.1
2,016,979	+		PGA1_c19380	0.12	-0.9
2,016,980	-		PGA1_c19380	0.12	+0.8
2,016,983	-		PGA1_c19380	0.12	+1.8
2,016,987	-		PGA1_c19380	0.13	-0.4
2,016,987	-		PGA1_c19380	0.13	+0.5
2,016,987	-		PGA1_c19380	0.13	-0.8
2,016,987	-		PGA1_c19380	0.13	+0.8
2,016,998	-		PGA1_c19380	0.15	+0.4
2,016,999	+		PGA1_c19380	0.15	-0.8
2,016,999	+		PGA1_c19380	0.15	-0.0
2,017,007	-		PGA1_c19380	0.16	+0.4
2,017,007	-		PGA1_c19380	0.16	+0.7
2,017,007	-		PGA1_c19380	0.16	-0.5
2,017,007	-		PGA1_c19380	0.16	-0.3
2,017,009	-		PGA1_c19380	0.16	-0.3
2,017,009	-		PGA1_c19380	0.16	-0.3
2,017,009	-		PGA1_c19380	0.16	+1.0
2,017,017	-		PGA1_c19380	0.18	-2.0
2,017,045	+		PGA1_c19380	0.22	-2.3
2,017,053	-		PGA1_c19380	0.23	+1.6
2,017,087	-		PGA1_c19380	0.29	+2.0
2,017,098	-		PGA1_c19380	0.30	-0.2
2,017,099	+		PGA1_c19380	0.30	+0.6
2,017,123	+		PGA1_c19380	0.34	+1.0
2,017,128	+		PGA1_c19380	0.35	+0.5
2,017,136	-		PGA1_c19380	0.36	-2.2
2,017,157	+		PGA1_c19380	0.40	-0.2
2,017,157	+		PGA1_c19380	0.40	+0.4
2,017,165	-		PGA1_c19380	0.41	-1.2
2,017,176	+		PGA1_c19380	0.43	+0.1
2,017,204	+		PGA1_c19380	0.47	-1.0
2,017,204	+		PGA1_c19380	0.47	+0.7
2,017,213	+		PGA1_c19380	0.48	-1.5
2,017,215	+		PGA1_c19380	0.49	+2.0
2,017,222	+		PGA1_c19380	0.50	-0.0
2,017,230	-		PGA1_c19380	0.51	-1.7
2,017,230	-		PGA1_c19380	0.51	+0.4
2,017,237	+		PGA1_c19380	0.52	-1.5
2,017,237	+		PGA1_c19380	0.52	-0.1
2,017,237	+		PGA1_c19380	0.52	-2.4
2,017,237	+		PGA1_c19380	0.52	-0.6
2,017,245	-		PGA1_c19380	0.54	-1.3
2,017,245	-		PGA1_c19380	0.54	-0.4
2,017,245	-		PGA1_c19380	0.54	-0.6
2,017,245	-		PGA1_c19380	0.54	-1.8
2,017,245	-		PGA1_c19380	0.54	-0.8
2,017,245	-		PGA1_c19380	0.54	-0.1
2,017,245	-		PGA1_c19380	0.54	-0.3
2,017,247	+		PGA1_c19380	0.54	+0.5
2,017,255	-		PGA1_c19380	0.55	+1.7
2,017,256	+		PGA1_c19380	0.55	+0.8
2,017,261	+		PGA1_c19380	0.56	-0.2
2,017,261	+		PGA1_c19380	0.56	-0.5
2,017,269	-		PGA1_c19380	0.57	-0.5
2,017,269	-		PGA1_c19380	0.57	-1.2
2,017,291	+		PGA1_c19380	0.61	-3.0
2,017,293	-		PGA1_c19380	0.61	-2.3
2,017,299	-		PGA1_c19380	0.62	-0.6
2,017,312	-		PGA1_c19380	0.64	-0.2
2,017,331	+		PGA1_c19380	0.67	+0.4
2,017,341	+		PGA1_c19380	0.69	+1.9
2,017,346	+		PGA1_c19380	0.70	-1.3
2,017,346	+		PGA1_c19380	0.70	+0.8
2,017,346	+		PGA1_c19380	0.70	-0.3
2,017,346	+		PGA1_c19380	0.70	+1.4
2,017,346	+		PGA1_c19380	0.70	-0.9
2,017,346	+		PGA1_c19380	0.70	-1.5
2,017,346	+		PGA1_c19380	0.70	-1.5
2,017,349	-		PGA1_c19380	0.70	+1.3
2,017,349	-		PGA1_c19380	0.70	+0.2
2,017,349	-		PGA1_c19380	0.70	-2.6
2,017,354	-		PGA1_c19380	0.71	-0.4
2,017,354	-		PGA1_c19380	0.71	-0.1
2,017,354	-		PGA1_c19380	0.71	-0.4
2,017,354	-		PGA1_c19380	0.71	+0.7
2,017,354	-		PGA1_c19380	0.71	-0.3
2,017,354	-		PGA1_c19380	0.71	+0.6
2,017,378	+		PGA1_c19380	0.75	-0.0
2,017,378	+		PGA1_c19380	0.75	-0.0
2,017,378	+		PGA1_c19380	0.75	+0.3
2,017,378	+		PGA1_c19380	0.75	+0.6
2,017,378	+		PGA1_c19380	0.75	+0.4
2,017,378	+		PGA1_c19380	0.75	-0.0
2,017,386	-		PGA1_c19380	0.76	-0.5
2,017,386	-		PGA1_c19380	0.76	-1.2
2,017,386	-		PGA1_c19380	0.76	-1.0
2,017,386	-		PGA1_c19380	0.76	+0.2
2,017,386	-		PGA1_c19380	0.76	+0.9
2,017,388	+		PGA1_c19380	0.76	+0.8
2,017,388	+		PGA1_c19380	0.76	-1.3
2,017,388	+		PGA1_c19380	0.76	+0.4
2,017,391	-		PGA1_c19380	0.77	-0.6
2,017,393	+		PGA1_c19380	0.77	-0.1
2,017,396	-		PGA1_c19380	0.77	+1.0
2,017,396	-		PGA1_c19380	0.77	+0.1
2,017,396	-		PGA1_c19380	0.77	-2.8
2,017,435	+		PGA1_c19380	0.84	-1.5
2,017,443	-		PGA1_c19380	0.85	-1.0
2,017,488	+				-0.5
2,017,496	-				-0.4
2,017,511	-				-1.2
2,017,513	+				-1.3
2,017,513	+				-0.3
2,017,513	+				-0.0
2,017,513	+				-1.3
2,017,513	+				-1.5
2,017,513	+				-0.7
2,017,513	+				+1.0
2,017,513	+				+2.2
2,017,513	+				-0.0
2,017,513	+				-0.3
2,017,513	+				-1.3
2,017,513	+				-2.1
2,017,513	+				-0.8
2,017,513	+				+0.6
2,017,513	+				-0.0
2,017,513	+				+1.0
2,017,513	+				-0.1
2,017,513	+				+0.1
2,017,513	+				-1.4
2,017,513	+				-0.7
2,017,513	+				-1.2
2,017,513	+				+0.3
2,017,513	+				-0.6
2,017,513	+				-1.1
2,017,513	+				+1.6
2,017,513	+				+0.1
2,017,513	+				-1.4
2,017,513	+				-1.3
2,017,513	+				+1.1
2,017,513	+				-1.0
2,017,513	+				-0.7
2,017,513	+				-1.3
2,017,513	+				+0.1
2,017,513	+				+0.3
2,017,513	+				-3.1
2,017,513	+				-1.3
2,017,513	+				-1.3
2,017,513	+				+0.7
2,017,513	+				-2.5
2,017,521	+				+0.2
2,017,521	+				-1.7
2,017,521	+				-0.7
2,017,521	+				+1.2
2,017,521	+				+1.8
2,017,521	+				-0.3
2,017,521	-				+0.4
2,017,521	-				+1.6
2,017,521	-				-1.8
2,017,521	-				+1.4
2,017,521	-				+0.3
2,017,521	-				-1.0
2,017,521	-				-0.2
2,017,521	-				-0.3
2,017,521	-				+0.4
2,017,521	-				-0.7
2,017,521	-				-0.0
2,017,521	-				+0.4
2,017,521	-				-2.0
2,017,521	-				+0.6
2,017,521	-				-0.5
2,017,521	-				-0.2
2,017,521	-				-0.2
2,017,521	-				+0.2
2,017,521	-				-1.4
2,017,521	-				+0.8
2,017,521	-				-0.9
2,017,521	-				-0.9
2,017,521	-				+1.1
2,017,521	-				-0.6
2,017,521	-				-1.5
2,017,521	-				+0.7
2,017,521	-				+1.8
2,017,521	-				+1.0
2,017,521	-				-0.6
2,017,521	-				+0.2
2,017,521	-				-1.1
2,017,521	-				-0.3
2,017,521	-				-1.0
2,017,521	-				-1.1
2,017,521	-				-1.1
2,017,521	-				-1.9
2,017,521	-				-0.4
2,017,521	-				-0.8
2,017,521	-				+1.4
2,017,521	-				-0.2
2,017,529	-				+0.7
2,017,529	-				+1.5
2,017,529	-				-1.0
2,017,529	-				+0.2
2,017,529	-				-1.1
2,017,546	+				-2.0
2,017,556	+				+0.5
2,017,558	+				+0.9
2,017,558	+				+1.3
2,017,559	+				+0.2
2,017,559	+				-0.1
2,017,559	+				-0.9
2,017,559	+				-0.8
2,017,559	+				-0.1
2,017,567	-				-0.0
2,017,567	-				-0.2
2,017,572	+				+0.2
2,017,572	+				+2.0
2,017,572	+				-0.3
2,017,572	+				+1.0
2,017,572	+				+0.1
2,017,577	+				-0.2
2,017,580	-				-0.9
2,017,580	-				+1.2
2,017,580	-				-1.7
2,017,628	+				+1.0
2,017,634	-				-0.3
2,017,634	-				-0.7
2,017,676	-				-0.4
2,017,763	-				+1.1
2,017,765	-				-1.5
2,017,767	+				-1.1
2,017,800	+				-0.7
2,017,800	+				+0.6
2,017,801	+				-0.0
2,017,801	+				+0.5
2,017,801	+				-1.5
2,017,801	+				-1.2
2,017,809	-				-0.8
2,017,809	-				-1.0
2,017,809	-				+1.2
2,017,809	-				-2.0
2,017,809	-				-1.0
2,017,809	-				+0.5
2,017,809	-				-1.1
2,017,809	-				-1.1
2,017,809	-				+0.7
2,017,809	-				-1.1
2,017,809	-				-1.3
2,017,809	-				-0.2
2,017,810	+				-2.5
2,017,815	+				-1.2
2,017,823	-				+0.5
2,017,823	-				-1.9