Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c18730

Experiment: D-Lactate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Lactate (C)
1,943,437	+				-0.2
1,943,438	+				-0.3
1,943,445	-				-1.1
1,943,445	-				+0.8
1,943,445	-				-1.8
1,943,446	-				-1.9
1,943,463	-				+0.6
1,943,475	-				-0.3
1,943,493	+				-2.2
1,943,497	-				+0.0
1,943,506	+				-1.4
1,943,511	+				+0.3
1,943,545	+				+1.4
1,943,568	+				-0.2
1,943,591	-				+0.0
1,943,598	+				-1.0
1,943,618	+				-1.4
1,943,619	+				-2.2
1,943,619	+				-0.6
1,943,619	+				-1.0
1,943,619	+				-1.2
1,943,619	+				-0.1
1,943,619	+				+0.1
1,943,619	+				-1.5
1,943,624	+				-0.9
1,943,626	-				+1.8
1,943,627	-				+2.0
1,943,627	-				+0.5
1,943,627	-				+1.6
1,943,627	-				+1.0
1,943,627	-				+0.2
1,943,627	-				+1.3
1,943,627	-				+0.6
1,943,627	-				-1.9
1,943,627	-				-1.0
1,943,632	-				-0.1
1,943,633	-				-0.8
1,943,655	+				-0.7
1,943,655	+				+0.6
1,943,655	+				-1.2
1,943,655	+				-0.1
1,943,655	+				-0.8
1,943,655	+				-1.8
1,943,655	+				-1.3
1,943,655	+				-1.9
1,943,663	-				-0.3
1,943,663	-				-2.0
1,943,663	-				+0.0
1,943,663	-				+0.5
1,943,681	+				+1.0
1,943,689	-				+0.2
1,943,689	-				+1.7
1,943,700	+				-0.2
1,943,700	+				-2.3
1,943,700	+				-1.5
1,943,700	+				+0.4
1,943,708	-				-1.7
1,943,708	-				+0.7
1,943,708	-				+0.6
1,943,710	+				+1.5
1,943,710	+				+1.0
1,943,710	+				-0.6
1,943,718	-				+0.0
1,943,718	-				-0.3
1,943,718	-				+0.4
1,943,718	-				+0.8
1,943,718	-				+1.2
1,943,718	-				+2.0
1,943,718	-				+0.4
1,943,744	+				-1.0
1,943,797	-				+0.7
1,943,833	+				+0.4
1,943,833	+				-0.8
1,943,833	+				+1.6
1,943,836	+				-0.6
1,943,836	+				+0.4
1,943,836	-				-0.5
1,943,841	-				-0.2
1,943,842	+				-1.2
1,943,887	+				+0.4
1,943,887	+				-2.0
1,943,887	+				-0.6
1,943,887	+				-1.6
1,943,887	+				-0.8
1,943,887	+				-0.2
1,943,890	+				+1.4
1,943,890	+				-1.3
1,943,895	-				-0.2
1,943,895	-				+1.2
1,943,895	-				+0.4
1,943,895	-				+0.2
1,943,895	-				-0.8
1,943,898	-				+1.4
1,943,898	-				+1.9
1,943,898	-				-1.2
1,943,898	-				-0.5
1,943,898	-				-1.5
1,943,898	-				+0.5
1,943,898	-				+1.4
1,943,899	+				+0.0
1,943,900	+				-2.1
1,943,900	+				-0.9
1,943,900	+				-0.1
1,943,900	+				-1.6
1,943,900	+				+0.7
1,943,900	+				-1.2
1,943,900	+				-1.3
1,943,900	+				+0.7
1,943,900	+				-1.6
1,943,906	+				-0.9
1,943,908	-				-0.3
1,943,908	-				-1.6
1,943,908	-				-0.8
1,943,908	-				-1.4
1,943,908	-				+1.0
1,943,908	-				-1.9
1,943,908	-				-0.9
1,943,908	-				-0.5
1,943,910	+				-1.1
1,943,914	-				-0.2
1,943,915	+				-0.4
1,943,923	-				-0.3
1,943,923	-				-1.1
1,943,923	-				-1.1
1,943,925	+				-1.0
1,943,925	+				-0.5
1,943,925	+				-1.8
1,943,925	+				-1.7
1,943,925	+				+0.2
1,943,925	+				-0.6
1,943,925	+				+0.1
1,943,925	+				-1.0
1,943,925	+				+0.7
1,943,925	+				+0.8
1,943,933	-				-0.2
1,943,933	-				+2.0
1,943,933	-				+2.3
1,943,933	-				+2.0
1,943,933	-				+1.4
1,943,965	-				-1.0
1,943,978	-				+0.2
1,943,978	-				-0.3
1,943,978	-				-0.8
1,944,022	-		PGA1_c18730	0.11	-1.2
1,944,044	+		PGA1_c18730	0.13	-0.8
1,944,044	+		PGA1_c18730	0.13	-0.6
1,944,052	-		PGA1_c18730	0.14	+0.4
1,944,080	+		PGA1_c18730	0.17	-0.6
1,944,081	+		PGA1_c18730	0.17	-1.4
1,944,088	-		PGA1_c18730	0.18	-1.3
1,944,088	-		PGA1_c18730	0.18	-2.9
1,944,090	+		PGA1_c18730	0.18	-0.3
1,944,095	+		PGA1_c18730	0.18	+0.0
1,944,113	+		PGA1_c18730	0.20	-1.8
1,944,118	+		PGA1_c18730	0.20	-1.2
1,944,121	-		PGA1_c18730	0.21	-1.3
1,944,126	-		PGA1_c18730	0.21	+0.1
1,944,131	-		PGA1_c18730	0.22	-0.6
1,944,165	-		PGA1_c18730	0.25	+0.5
1,944,197	+		PGA1_c18730	0.28	+0.1
1,944,205	-		PGA1_c18730	0.29	-0.8
1,944,205	-		PGA1_c18730	0.29	+2.0
1,944,265	+		PGA1_c18730	0.35	-1.6
1,944,266	+		PGA1_c18730	0.35	+0.7
1,944,266	-		PGA1_c18730	0.35	-1.2
1,944,295	+		PGA1_c18730	0.38	+0.6
1,944,302	+		PGA1_c18730	0.38	-0.3
1,944,302	+		PGA1_c18730	0.38	+0.2
1,944,365	-		PGA1_c18730	0.45	-0.8
1,944,373	-		PGA1_c18730	0.45	-0.2
1,944,379	+		PGA1_c18730	0.46	+0.4
1,944,380	+		PGA1_c18730	0.46	-0.5
1,944,394	+		PGA1_c18730	0.47	-1.7
1,944,394	+		PGA1_c18730	0.47	+0.0
1,944,410	-		PGA1_c18730	0.49	+0.0
1,944,441	+		PGA1_c18730	0.52	+0.6
1,944,488	-		PGA1_c18730	0.57	-2.0
1,944,608	+		PGA1_c18730	0.68	-0.2
1,944,616	-		PGA1_c18730	0.69	-0.3
1,944,632	-		PGA1_c18730	0.71	-1.5
1,944,632	-		PGA1_c18730	0.71	+0.2
1,944,746	+		PGA1_c18730	0.82	-2.3
1,944,848	+				-1.6
1,944,848	+				-0.3
1,944,848	+				+0.4
1,944,856	-				-1.9
1,944,856	-				-1.3
1,944,856	-				+1.0
1,944,856	-				+0.7
1,944,936	-				+0.8
1,944,941	+				-0.2
1,944,941	+				-0.0
1,944,949	-				+1.7
1,944,949	-				-1.5
1,944,949	-				-0.5
1,944,996	-				-2.8
1,944,996	-				+0.6
1,945,006	-				-0.5
1,945,011	-				-0.6
1,945,013	-				-0.2
1,945,131	+		PGA1_c18740	0.24	-0.3
1,945,144	-		PGA1_c18740	0.25	-0.9
1,945,152	+		PGA1_c18740	0.26	+0.2
1,945,164	+		PGA1_c18740	0.28	+0.4
1,945,200	+		PGA1_c18740	0.33	-0.4
1,945,208	-		PGA1_c18740	0.34	-0.6
1,945,245	-		PGA1_c18740	0.39	-1.8
1,945,324	-		PGA1_c18740	0.49	-1.7
1,945,353	-		PGA1_c18740	0.53	-0.6
1,945,452	-		PGA1_c18740	0.66	-0.3
1,945,462	-		PGA1_c18740	0.67	-0.5
1,945,463	+		PGA1_c18740	0.67	-0.3
1,945,463	+		PGA1_c18740	0.67	+1.3
1,945,463	+		PGA1_c18740	0.67	-0.7
1,945,471	-		PGA1_c18740	0.68	-0.9
1,945,471	-		PGA1_c18740	0.68	-0.0
1,945,471	-		PGA1_c18740	0.68	+1.2
1,945,479	+		PGA1_c18740	0.69	-0.8
1,945,479	+		PGA1_c18740	0.69	+0.4
1,945,487	-		PGA1_c18740	0.70	-2.3
1,945,487	-		PGA1_c18740	0.70	+0.3
1,945,508	-		PGA1_c18740	0.73	+0.3
1,945,510	+		PGA1_c18740	0.73	+0.5
1,945,511	+		PGA1_c18740	0.73	-0.5
1,945,537	-		PGA1_c18740	0.77	+0.7
1,945,544	+		PGA1_c18740	0.78	+1.3
1,945,568	-		PGA1_c18740	0.81	-0.8
1,945,607	+		PGA1_c18740	0.86	+0.4
1,945,631	-		PGA1_c18740	0.89	-1.6
1,945,768	+				+0.4
1,945,776	-				+1.8
1,945,776	-				+1.0
1,945,818	+				-1.0
1,945,820	+				+2.0