Strain Fitness in Shewanella amazonensis SB2B around Sama_2772

Experiment: D-Glucosamine Hydrochloride (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucosamine Hydrochloride (N)
3,311,455	+		Sama_2771	0.33	-0.7
3,311,455	+		Sama_2771	0.33	+1.9
3,311,470	-		Sama_2771	0.34	+0.0
3,311,488	+		Sama_2771	0.35	-1.2
3,311,488	+		Sama_2771	0.35	+0.4
3,311,488	+		Sama_2771	0.35	+0.7
3,311,489	-		Sama_2771	0.35	-0.9
3,311,489	-		Sama_2771	0.35	-0.2
3,311,491	+		Sama_2771	0.36	+0.9
3,311,552	+		Sama_2771	0.40	+0.1
3,311,731	+		Sama_2771	0.53	+0.4
3,311,752	+		Sama_2771	0.54	-0.5
3,311,752	+		Sama_2771	0.54	-2.4
3,311,752	+		Sama_2771	0.54	-0.1
3,311,752	+		Sama_2771	0.54	-0.1
3,311,752	+		Sama_2771	0.54	-1.4
3,311,752	+		Sama_2771	0.54	+1.3
3,311,752	+		Sama_2771	0.54	+1.3
3,311,752	+		Sama_2771	0.54	-0.9
3,311,753	-		Sama_2771	0.54	-0.1
3,311,753	-		Sama_2771	0.54	-0.8
3,311,753	-		Sama_2771	0.54	-0.2
3,311,753	-		Sama_2771	0.54	-0.9
3,311,753	-		Sama_2771	0.54	-2.4
3,311,753	-		Sama_2771	0.54	-1.0
3,311,753	-		Sama_2771	0.54	-0.5
3,311,754	+		Sama_2771	0.54	+0.1
3,311,755	-		Sama_2771	0.55	+0.1
3,311,755	-		Sama_2771	0.55	-1.5
3,311,755	-		Sama_2771	0.55	+0.3
3,311,755	-		Sama_2771	0.55	-1.5
3,311,797	+		Sama_2771	0.58	+0.2
3,311,797	+		Sama_2771	0.58	-1.3
3,311,797	+		Sama_2771	0.58	-0.0
3,311,825	+		Sama_2771	0.60	-1.3
3,311,825	+		Sama_2771	0.60	-0.7
3,311,825	+		Sama_2771	0.60	-0.7
3,311,826	-		Sama_2771	0.60	-1.4
3,311,826	-		Sama_2771	0.60	+0.2
3,311,826	-		Sama_2771	0.60	+0.4
3,311,826	-		Sama_2771	0.60	-0.2
3,311,826	-		Sama_2771	0.60	-0.5
3,311,927	+		Sama_2771	0.67	-0.6
3,311,927	+		Sama_2771	0.67	-0.5
3,311,927	+		Sama_2771	0.67	+0.8
3,311,927	+		Sama_2771	0.67	-0.5
3,311,927	+		Sama_2771	0.67	+0.1
3,311,927	+		Sama_2771	0.67	+0.9
3,311,928	-		Sama_2771	0.67	-0.7
3,311,928	-		Sama_2771	0.67	+0.4
3,311,928	-		Sama_2771	0.67	+0.9
3,311,928	-		Sama_2771	0.67	-0.9
3,311,928	-		Sama_2771	0.67	-1.4
3,311,928	-		Sama_2771	0.67	-0.3
3,311,928	-		Sama_2771	0.67	+1.0
3,311,928	-		Sama_2771	0.67	+0.1
3,311,934	+		Sama_2771	0.67	-2.1
3,311,934	+		Sama_2771	0.67	+1.5
3,311,935	-		Sama_2771	0.67	-1.8
3,311,935	-		Sama_2771	0.67	-0.3
3,311,935	-		Sama_2771	0.67	-1.1
3,311,937	+		Sama_2771	0.68	+1.2
3,311,937	+		Sama_2771	0.68	-0.4
3,311,937	+		Sama_2771	0.68	-0.9
3,311,937	+		Sama_2771	0.68	-1.4
3,311,937	+		Sama_2771	0.68	+0.1
3,311,937	+		Sama_2771	0.68	+0.7
3,311,937	+		Sama_2771	0.68	+1.6
3,311,938	-		Sama_2771	0.68	+1.0
3,311,938	-		Sama_2771	0.68	-0.2
3,311,938	-		Sama_2771	0.68	+0.3
3,311,938	-		Sama_2771	0.68	-0.0
3,311,938	-		Sama_2771	0.68	+0.7
3,311,938	-		Sama_2771	0.68	+0.4
3,311,938	-		Sama_2771	0.68	-1.4
3,311,938	-		Sama_2771	0.68	+0.3
3,312,098	+		Sama_2771	0.79	+0.4
3,312,099	-		Sama_2771	0.79	+0.3
3,312,121	+		Sama_2771	0.81	-0.2
3,312,121	+		Sama_2771	0.81	+0.4
3,312,122	-		Sama_2771	0.81	+1.7
3,312,122	-		Sama_2771	0.81	-1.1
3,312,210	+		Sama_2771	0.87	+0.1
3,312,210	+		Sama_2771	0.87	+1.9
3,312,210	+		Sama_2771	0.87	-1.7
3,312,251	-				+0.4
3,312,251	-				+0.1
3,312,256	+				-0.7
3,312,256	+				-0.4
3,312,256	+				-0.4
3,312,257	-				-0.1
3,312,336	+				+1.1
3,312,336	+				-2.5
3,312,337	-				-1.0
3,312,337	-				-0.0
3,312,337	-				-0.1
3,312,337	-				+1.5
3,312,340	+				-1.4
3,312,340	+				-1.0
3,312,372	+				-1.3
3,312,372	+				-0.4
3,312,372	+				-0.4
3,312,447	+				-1.5
3,312,470	+				+0.2
3,312,470	+				-1.0
3,312,470	+				+1.1
3,312,471	-				-0.1
3,312,471	-				+0.5
3,312,491	-				-1.1
3,312,514	+				-0.8
3,312,523	+				+0.8
3,312,524	-				-0.9
3,312,524	-				-0.0
3,312,524	-				-0.1
3,312,524	-				+0.6
3,312,524	-				+0.6
3,312,524	-				-0.1
3,312,524	-				-1.5
3,312,524	-				+0.0
3,312,524	-				-0.6
3,312,539	-				-1.2
3,312,590	+		Sama_2772	0.14	-0.4
3,312,599	+		Sama_2772	0.15	-2.4
3,312,632	+		Sama_2772	0.17	-2.6
3,312,632	+		Sama_2772	0.17	+1.7
3,312,632	+		Sama_2772	0.17	-0.7
3,312,632	+		Sama_2772	0.17	-0.0
3,312,632	+		Sama_2772	0.17	-0.2
3,312,632	+		Sama_2772	0.17	+1.6
3,312,633	-		Sama_2772	0.17	-0.9
3,312,633	-		Sama_2772	0.17	-0.7
3,312,633	-		Sama_2772	0.17	-0.1
3,312,677	+		Sama_2772	0.20	-1.2
3,312,677	+		Sama_2772	0.20	+0.6
3,312,677	+		Sama_2772	0.20	-0.5
3,312,677	+		Sama_2772	0.20	-0.3
3,312,683	+		Sama_2772	0.21	+0.1
3,312,684	-		Sama_2772	0.21	+0.6
3,312,704	+		Sama_2772	0.22	-0.9
3,312,705	-		Sama_2772	0.23	-0.5
3,312,705	-		Sama_2772	0.23	+0.1
3,312,716	+		Sama_2772	0.23	-0.1
3,312,716	+		Sama_2772	0.23	-1.1
3,312,717	-		Sama_2772	0.23	-0.8
3,312,717	-		Sama_2772	0.23	-1.7
3,312,736	+		Sama_2772	0.25	-1.4
3,312,736	+		Sama_2772	0.25	-0.7
3,312,736	+		Sama_2772	0.25	-1.9
3,312,737	-		Sama_2772	0.25	+0.5
3,312,737	-		Sama_2772	0.25	+2.2
3,312,737	-		Sama_2772	0.25	-0.7
3,312,759	+		Sama_2772	0.27	+0.0
3,312,760	-		Sama_2772	0.27	-0.7
3,312,760	-		Sama_2772	0.27	-0.4
3,312,790	+		Sama_2772	0.29	-0.7
3,312,790	+		Sama_2772	0.29	+1.0
3,312,790	+		Sama_2772	0.29	-0.1
3,312,790	+		Sama_2772	0.29	-1.1
3,312,791	-		Sama_2772	0.29	-0.4
3,312,791	-		Sama_2772	0.29	-0.7
3,312,791	-		Sama_2772	0.29	+0.2
3,312,791	-		Sama_2772	0.29	+0.1
3,312,791	-		Sama_2772	0.29	-0.9
3,312,992	+		Sama_2772	0.44	+0.3
3,312,992	+		Sama_2772	0.44	-0.8
3,312,993	-		Sama_2772	0.44	+0.8
3,312,993	-		Sama_2772	0.44	-0.3
3,313,055	+		Sama_2772	0.49	+0.1
3,313,105	-		Sama_2772	0.53	-0.1
3,313,124	+		Sama_2772	0.54	+0.2
3,313,125	-		Sama_2772	0.54	-1.5
3,313,135	+		Sama_2772	0.55	-0.4
3,313,136	-		Sama_2772	0.55	-1.4
3,313,136	-		Sama_2772	0.55	+1.0
3,313,145	+		Sama_2772	0.56	+0.3
3,313,145	+		Sama_2772	0.56	-0.5
3,313,145	+		Sama_2772	0.56	-1.1
3,313,146	-		Sama_2772	0.56	+0.8
3,313,146	-		Sama_2772	0.56	-1.4
3,313,146	-		Sama_2772	0.56	-1.0
3,313,146	-		Sama_2772	0.56	-0.6
3,313,146	-		Sama_2772	0.56	-1.4
3,313,200	+		Sama_2772	0.60	-1.0
3,313,200	+		Sama_2772	0.60	+0.7
3,313,200	+		Sama_2772	0.60	-1.1
3,313,200	+		Sama_2772	0.60	+1.4
3,313,200	+		Sama_2772	0.60	+0.6
3,313,201	-		Sama_2772	0.60	-1.2
3,313,201	-		Sama_2772	0.60	-1.9
3,313,201	-		Sama_2772	0.60	+0.4
3,313,201	-		Sama_2772	0.60	-0.2
3,313,241	+		Sama_2772	0.63	+0.2
3,313,241	+		Sama_2772	0.63	-1.1
3,313,241	+		Sama_2772	0.63	-0.0
3,313,241	+		Sama_2772	0.63	-0.7
3,313,242	-		Sama_2772	0.63	-0.6
3,313,242	-		Sama_2772	0.63	+0.1
3,313,242	-		Sama_2772	0.63	+0.4
3,313,242	-		Sama_2772	0.63	-0.8
3,313,242	-		Sama_2772	0.63	-1.0
3,313,245	+		Sama_2772	0.64	-0.7
3,313,245	+		Sama_2772	0.64	-2.0
3,313,245	+		Sama_2772	0.64	-0.3
3,313,245	+		Sama_2772	0.64	+0.4
3,313,246	-		Sama_2772	0.64	+0.9
3,313,246	-		Sama_2772	0.64	+0.7
3,313,246	-		Sama_2772	0.64	-1.1
3,313,298	+		Sama_2772	0.68	+0.4
3,313,298	+		Sama_2772	0.68	+0.1
3,313,299	-		Sama_2772	0.68	+0.7
3,313,319	+		Sama_2772	0.69	+0.2
3,313,319	+		Sama_2772	0.69	-0.4
3,313,319	+		Sama_2772	0.69	-1.2
3,313,320	-		Sama_2772	0.69	-0.2
3,313,333	+		Sama_2772	0.70	+1.4
3,313,333	+		Sama_2772	0.70	-0.6
3,313,333	+		Sama_2772	0.70	-1.2
3,313,333	+		Sama_2772	0.70	-1.5
3,313,334	-		Sama_2772	0.70	-2.4
3,313,334	-		Sama_2772	0.70	+0.6
3,313,334	-		Sama_2772	0.70	+0.0
3,313,334	-		Sama_2772	0.70	+0.2
3,313,334	-		Sama_2772	0.70	-0.9
3,313,334	-		Sama_2772	0.70	+0.2
3,313,334	-		Sama_2772	0.70	-0.3
3,313,351	+		Sama_2772	0.72	+0.4
3,313,367	-		Sama_2772	0.73	-1.5
3,313,377	-		Sama_2772	0.74	+0.4
3,313,385	+		Sama_2772	0.74	-0.3
3,313,386	-		Sama_2772	0.74	+0.0
3,313,428	-		Sama_2772	0.77	-1.1
3,313,486	+		Sama_2772	0.82	+0.3
3,313,486	+		Sama_2772	0.82	-1.3
3,313,486	+		Sama_2772	0.82	-0.6
3,313,487	-		Sama_2772	0.82	-1.0
3,313,487	-		Sama_2772	0.82	+0.1
3,313,487	-		Sama_2772	0.82	+0.1
3,313,487	-		Sama_2772	0.82	+0.6
3,313,614	-				-0.9
3,313,753	+				-1.0
3,313,789	+				-0.2
3,313,789	+				+0.3
3,313,790	-				-0.4
3,313,790	-				-1.3
3,313,822	-				+0.6
3,313,881	+				-0.4
3,313,882	-				-0.5
3,313,890	+				+0.4
3,313,934	-				-1.5
3,313,981	+				+1.9
3,313,982	-				-1.1
3,314,103	+				-1.2
3,314,103	+				-0.0
3,314,104	-				+0.7
3,314,104	-				-0.2
3,314,104	-				+0.5
3,314,118	-				-2.1
3,314,164	+				-1.3
3,314,164	+				-1.3
3,314,164	+				-0.1
3,314,164	+				-0.6
3,314,165	-				+0.5
3,314,165	-				-0.4
3,314,165	-				+0.1
3,314,202	-				+0.9
3,314,202	-				-0.1
3,314,219	-				-0.1
3,314,219	-				-1.7
3,314,219	-				+0.8
3,314,287	+				+0.9
3,314,299	+				+1.7
3,314,362	+		Sama_2773	0.12	+1.7
3,314,362	+		Sama_2773	0.12	+1.1
3,314,362	+		Sama_2773	0.12	+1.6
3,314,362	+		Sama_2773	0.12	-0.0
3,314,362	+		Sama_2773	0.12	+0.8
3,314,363	-		Sama_2773	0.12	-0.5
3,314,363	-		Sama_2773	0.12	+0.0
3,314,363	-		Sama_2773	0.12	+0.7
3,314,363	-		Sama_2773	0.12	-0.3
3,314,363	-		Sama_2773	0.12	-1.9
3,314,363	-		Sama_2773	0.12	-1.4
3,314,363	-		Sama_2773	0.12	+0.2
3,314,363	-		Sama_2773	0.12	-2.7
3,314,363	-		Sama_2773	0.12	+0.7
3,314,378	+		Sama_2773	0.12	-0.7
3,314,418	-		Sama_2773	0.14	-0.3
3,314,418	-		Sama_2773	0.14	+1.5
3,314,455	-		Sama_2773	0.15	-0.5
3,314,455	-		Sama_2773	0.15	+0.4
3,314,455	-		Sama_2773	0.15	+0.1
3,314,612	+		Sama_2773	0.21	-0.3
3,314,612	+		Sama_2773	0.21	+0.2
3,314,669	+		Sama_2773	0.24	-1.1
3,314,670	-		Sama_2773	0.24	-0.1
3,314,670	-		Sama_2773	0.24	-0.8