Strain Fitness in Shewanella amazonensis SB2B around Sama_2526

Experiment: D-Glucosamine Hydrochloride (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucosamine Hydrochloride (N)
3,034,015	+		Sama_2524	0.72	+3.0
3,034,016	-		Sama_2524	0.72	-0.4
3,034,044	+		Sama_2524	0.74	-0.6
3,034,045	-		Sama_2524	0.74	+0.0
3,034,088	-		Sama_2524	0.77	+0.1
3,034,119	+		Sama_2524	0.79	+0.2
3,034,119	+		Sama_2524	0.79	-1.2
3,034,120	-		Sama_2524	0.79	-0.0
3,034,120	-		Sama_2524	0.79	+0.4
3,034,120	-		Sama_2524	0.79	+1.2
3,034,123	+		Sama_2524	0.79	+1.2
3,034,123	+		Sama_2524	0.79	+0.7
3,034,123	+		Sama_2524	0.79	-1.7
3,034,123	+		Sama_2524	0.79	-0.6
3,034,123	+		Sama_2524	0.79	+0.6
3,034,124	-		Sama_2524	0.79	+2.0
3,034,124	-		Sama_2524	0.79	-0.4
3,034,124	-		Sama_2524	0.79	-0.6
3,034,124	-		Sama_2524	0.79	-1.1
3,034,124	-		Sama_2524	0.79	-0.6
3,034,124	-		Sama_2524	0.79	+0.8
3,034,124	-		Sama_2524	0.79	-0.3
3,034,208	+		Sama_2524	0.85	-1.9
3,034,209	-		Sama_2524	0.85	-0.1
3,034,440	-				+0.0
3,034,454	-				-0.4
3,034,473	+				-0.4
3,034,474	-				-1.8
3,034,474	-				-0.8
3,034,474	-				-0.8
3,034,485	+				-1.7
3,034,485	+				-0.2
3,034,492	+				-0.3
3,034,493	-				+1.5
3,034,493	-				-0.7
3,034,505	+				+0.4
3,034,506	-				+0.4
3,034,513	-				-1.1
3,034,593	+		Sama_2525	0.22	-0.5
3,034,593	+		Sama_2525	0.22	+0.7
3,034,593	+		Sama_2525	0.22	-1.0
3,034,594	-		Sama_2525	0.23	-0.4
3,034,636	+		Sama_2525	0.33	-0.0
3,034,734	+		Sama_2525	0.56	+0.6
3,034,735	-		Sama_2525	0.56	-3.2
3,034,744	+		Sama_2525	0.59	-1.8
3,034,745	-		Sama_2525	0.59	-1.5
3,034,750	+		Sama_2525	0.60	+0.2
3,034,751	-		Sama_2525	0.60	-1.7
3,034,781	+		Sama_2525	0.67	-0.5
3,034,781	+		Sama_2525	0.67	-1.1
3,034,782	-		Sama_2525	0.68	-2.1
3,034,783	+		Sama_2525	0.68	-1.2
3,034,783	+		Sama_2525	0.68	+0.7
3,034,783	+		Sama_2525	0.68	+0.0
3,034,783	+		Sama_2525	0.68	+1.0
3,034,783	+		Sama_2525	0.68	-0.2
3,034,784	-		Sama_2525	0.68	+0.1
3,034,849	+		Sama_2525	0.84	-1.1
3,034,872	+		Sama_2525	0.89	+0.1
3,034,909	+				+0.7
3,034,909	+				+0.4
3,034,909	+				+0.3
3,034,909	+				+0.4
3,034,910	-				-0.8
3,034,927	+				-1.1
3,034,927	+				-2.3
3,034,949	+				+2.1
3,034,950	-				+0.6
3,034,950	-				+0.6
3,034,954	+				-0.4
3,034,954	+				+1.5
3,034,954	+				-1.2
3,034,955	-				-1.7
3,034,955	-				-0.2
3,034,957	+				+1.5
3,034,958	-				+1.3
3,034,958	-				-1.5
3,034,958	-				-0.9
3,035,080	+				-0.3
3,035,081	-				-0.3
3,035,172	+		Sama_2526	0.18	+0.2
3,035,172	+		Sama_2526	0.18	-0.1
3,035,173	-		Sama_2526	0.18	-0.8
3,035,180	+		Sama_2526	0.18	-0.1
3,035,182	+		Sama_2526	0.19	+1.2
3,035,182	+		Sama_2526	0.19	-0.9
3,035,182	+		Sama_2526	0.19	+2.7
3,035,182	+		Sama_2526	0.19	-0.1
3,035,182	+		Sama_2526	0.19	+0.5
3,035,182	+		Sama_2526	0.19	-1.6
3,035,182	+		Sama_2526	0.19	+0.2
3,035,183	-		Sama_2526	0.19	-0.4
3,035,183	-		Sama_2526	0.19	+0.2
3,035,183	-		Sama_2526	0.19	-2.0
3,035,211	+		Sama_2526	0.21	-0.1
3,035,212	-		Sama_2526	0.22	+0.4
3,035,212	-		Sama_2526	0.22	+0.1
3,035,212	-		Sama_2526	0.22	-0.3
3,035,212	-		Sama_2526	0.22	+0.6
3,035,212	-		Sama_2526	0.22	-1.1
3,035,222	+		Sama_2526	0.23	-0.8
3,035,239	+		Sama_2526	0.24	+1.2
3,035,239	+		Sama_2526	0.24	+1.1
3,035,353	+		Sama_2526	0.36	+0.4
3,035,353	+		Sama_2526	0.36	-0.5
3,035,434	+		Sama_2526	0.44	-1.3
3,035,435	-		Sama_2526	0.44	+0.7
3,035,435	-		Sama_2526	0.44	+2.0
3,035,452	-		Sama_2526	0.46	+0.5
3,035,471	+		Sama_2526	0.47	-1.2
3,035,472	-		Sama_2526	0.48	+0.0
3,035,479	+		Sama_2526	0.48	+0.1
3,035,479	+		Sama_2526	0.48	+0.7
3,035,479	+		Sama_2526	0.48	+0.2
3,035,479	+		Sama_2526	0.48	+0.4
3,035,479	+		Sama_2526	0.48	+0.9
3,035,479	+		Sama_2526	0.48	+1.0
3,035,480	-		Sama_2526	0.48	-0.6
3,035,480	-		Sama_2526	0.48	+0.8
3,035,480	-		Sama_2526	0.48	+1.9
3,035,480	-		Sama_2526	0.48	+0.5
3,035,480	-		Sama_2526	0.48	+0.8
3,035,480	-		Sama_2526	0.48	+0.6
3,035,480	-		Sama_2526	0.48	-1.5
3,035,496	+		Sama_2526	0.50	-1.5
3,035,506	+		Sama_2526	0.51	-0.7
3,035,506	+		Sama_2526	0.51	-1.9
3,035,507	-		Sama_2526	0.51	+0.9
3,035,507	-		Sama_2526	0.51	-2.0
3,035,507	-		Sama_2526	0.51	+1.3
3,035,576	+		Sama_2526	0.58	-1.9
3,035,576	+		Sama_2526	0.58	+0.6
3,035,576	+		Sama_2526	0.58	-0.3
3,035,576	+		Sama_2526	0.58	+0.4
3,035,577	-		Sama_2526	0.58	-0.3
3,035,577	-		Sama_2526	0.58	+0.3
3,035,577	-		Sama_2526	0.58	-0.1
3,035,577	-		Sama_2526	0.58	+0.7
3,035,577	-		Sama_2526	0.58	-0.5
3,035,577	-		Sama_2526	0.58	-0.2
3,035,601	-		Sama_2526	0.60	+0.7
3,035,601	-		Sama_2526	0.60	+0.3
3,035,601	-		Sama_2526	0.60	+0.5
3,035,645	+		Sama_2526	0.65	+0.8
3,035,645	+		Sama_2526	0.65	-0.8
3,035,646	-		Sama_2526	0.65	-0.8
3,035,646	-		Sama_2526	0.65	-0.4
3,035,652	+		Sama_2526	0.65	+1.5
3,035,653	-		Sama_2526	0.66	-0.2
3,035,653	-		Sama_2526	0.66	-0.3
3,035,653	-		Sama_2526	0.66	+1.4
3,035,653	-		Sama_2526	0.66	+0.7
3,035,697	+		Sama_2526	0.70	+0.4
3,035,697	+		Sama_2526	0.70	-1.3
3,035,697	+		Sama_2526	0.70	+0.3
3,035,698	-		Sama_2526	0.70	+0.8
3,035,698	-		Sama_2526	0.70	-1.0
3,035,698	-		Sama_2526	0.70	+0.6
3,035,705	+		Sama_2526	0.71	-0.7
3,035,706	-		Sama_2526	0.71	-0.3
3,035,807	+		Sama_2526	0.81	-0.9
3,035,807	+		Sama_2526	0.81	+0.4
3,035,807	+		Sama_2526	0.81	-0.1
3,035,808	-		Sama_2526	0.81	+0.2
3,035,998	-				-1.1
3,035,998	-				+0.8
3,036,010	-				+0.3
3,036,145	-				+2.5
3,036,177	+				-2.2
3,036,178	-				+0.2
3,036,182	+				-1.6
3,036,182	+				+0.5
3,036,182	+				+1.1
3,036,182	+				-2.4
3,036,183	-				-1.3
3,036,230	+				+1.5
3,036,375	-		Sama_2527	0.13	-2.3
3,036,407	+		Sama_2527	0.16	+0.2
3,036,407	+		Sama_2527	0.16	+0.2
3,036,408	-		Sama_2527	0.16	-1.4
3,036,408	-		Sama_2527	0.16	+1.2
3,036,408	-		Sama_2527	0.16	+0.9
3,036,408	-		Sama_2527	0.16	-1.1
3,036,443	+		Sama_2527	0.19	+1.2
3,036,444	-		Sama_2527	0.19	-1.2
3,036,454	+		Sama_2527	0.20	-0.2
3,036,454	+		Sama_2527	0.20	-1.8
3,036,455	-		Sama_2527	0.20	+0.2
3,036,455	-		Sama_2527	0.20	+0.9
3,036,522	-		Sama_2527	0.26	-0.2
3,036,522	-		Sama_2527	0.26	+1.7
3,036,522	-		Sama_2527	0.26	-0.0
3,036,544	+		Sama_2527	0.29	-1.7
3,036,544	+		Sama_2527	0.29	+0.4
3,036,639	+		Sama_2527	0.37	+0.3
3,036,639	+		Sama_2527	0.37	-0.7
3,036,640	-		Sama_2527	0.38	-1.5
3,036,640	-		Sama_2527	0.38	-0.0
3,036,658	+		Sama_2527	0.39	+0.3
3,036,698	+		Sama_2527	0.43	-0.3
3,036,698	+		Sama_2527	0.43	+0.4
3,036,698	+		Sama_2527	0.43	-0.4
3,036,698	+		Sama_2527	0.43	+1.1
3,036,822	+		Sama_2527	0.55	-1.1
3,036,822	+		Sama_2527	0.55	-1.2
3,036,822	+		Sama_2527	0.55	+0.2
3,036,822	+		Sama_2527	0.55	-0.5
3,036,822	+		Sama_2527	0.55	-0.6
3,036,823	-		Sama_2527	0.55	+0.5
3,036,823	-		Sama_2527	0.55	-1.8
3,036,823	-		Sama_2527	0.55	+0.7
3,036,823	-		Sama_2527	0.55	-0.4
3,036,823	-		Sama_2527	0.55	-0.3
3,036,838	+		Sama_2527	0.56	+0.0
3,036,839	-		Sama_2527	0.56	+1.0
3,036,839	-		Sama_2527	0.56	-0.6
3,036,841	+		Sama_2527	0.56	+0.7
3,036,841	+		Sama_2527	0.56	+0.1
3,036,841	+		Sama_2527	0.56	-1.5
3,036,841	+		Sama_2527	0.56	-0.4
3,036,841	+		Sama_2527	0.56	+0.5
3,036,841	+		Sama_2527	0.56	+0.6
3,036,842	-		Sama_2527	0.56	-0.7
3,036,842	-		Sama_2527	0.56	-1.1
3,036,842	-		Sama_2527	0.56	+0.2
3,036,875	-		Sama_2527	0.60	-0.1
3,036,875	-		Sama_2527	0.60	-0.0
3,036,917	+		Sama_2527	0.63	-1.2
3,036,917	+		Sama_2527	0.63	+1.0
3,036,917	+		Sama_2527	0.63	+0.6
3,036,917	+		Sama_2527	0.63	-1.7
3,036,918	-		Sama_2527	0.64	-0.1
3,036,918	-		Sama_2527	0.64	+0.5
3,036,943	+		Sama_2527	0.66	-0.9
3,036,963	+		Sama_2527	0.68	-1.0
3,036,964	-		Sama_2527	0.68	-0.7
3,036,964	-		Sama_2527	0.68	-2.0
3,036,964	-		Sama_2527	0.68	-0.7
3,036,990	+		Sama_2527	0.70	-0.8
3,036,991	-		Sama_2527	0.70	-0.0