Strain Fitness in Shewanella amazonensis SB2B around Sama_2443

Experiment: D-Glucosamine Hydrochloride (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucosamine Hydrochloride (N)
2,939,590	+		Sama_2442	0.30	-0.6
2,939,594	-		Sama_2442	0.30	-2.5
2,939,625	+		Sama_2442	0.32	-1.2
2,939,625	+		Sama_2442	0.32	-1.9
2,939,625	+		Sama_2442	0.32	-0.1
2,939,626	-		Sama_2442	0.32	-2.3
2,939,626	-		Sama_2442	0.32	-2.7
2,939,626	-		Sama_2442	0.32	-3.9
2,939,892	+		Sama_2442	0.51	-2.8
2,939,893	-		Sama_2442	0.51	-1.3
2,939,893	-		Sama_2442	0.51	-3.1
2,939,893	-		Sama_2442	0.51	-1.6
2,939,897	-		Sama_2442	0.52	-1.2
2,939,978	+		Sama_2442	0.57	-3.1
2,939,979	-		Sama_2442	0.57	-1.0
2,939,979	-		Sama_2442	0.57	-3.7
2,939,991	-		Sama_2442	0.58	-2.7
2,939,995	+		Sama_2442	0.59	-4.1
2,940,037	+		Sama_2442	0.62	-4.0
2,940,038	-		Sama_2442	0.62	-2.6
2,940,115	+		Sama_2442	0.67	-2.4
2,940,116	-		Sama_2442	0.67	-0.2
2,940,116	-		Sama_2442	0.67	-2.9
2,940,128	+		Sama_2442	0.68	-1.8
2,940,146	+		Sama_2442	0.69	-1.8
2,940,146	+		Sama_2442	0.69	-3.0
2,940,152	+		Sama_2442	0.70	-1.3
2,940,152	+		Sama_2442	0.70	-4.5
2,940,152	+		Sama_2442	0.70	-3.1
2,940,153	-		Sama_2442	0.70	-2.0
2,940,153	-		Sama_2442	0.70	-3.8
2,940,153	-		Sama_2442	0.70	-2.4
2,940,153	-		Sama_2442	0.70	-1.0
2,940,153	-		Sama_2442	0.70	-0.6
2,940,153	-		Sama_2442	0.70	-1.5
2,940,161	-		Sama_2442	0.70	-1.8
2,940,161	-		Sama_2442	0.70	-3.6
2,940,232	+		Sama_2442	0.76	-3.2
2,940,232	+		Sama_2442	0.76	-2.7
2,940,335	+		Sama_2442	0.83	-1.7
2,940,350	+		Sama_2442	0.84	-0.3
2,940,350	+		Sama_2442	0.84	-1.5
2,940,350	+		Sama_2442	0.84	-1.2
2,940,350	+		Sama_2442	0.84	-2.3
2,940,350	+		Sama_2442	0.84	-2.2
2,940,350	+		Sama_2442	0.84	-2.5
2,940,350	+		Sama_2442	0.84	-3.2
2,940,350	+		Sama_2442	0.84	-2.4
2,940,350	+		Sama_2442	0.84	-3.2
2,940,350	+		Sama_2442	0.84	-2.5
2,940,350	+		Sama_2442	0.84	-0.9
2,940,351	-		Sama_2442	0.84	-2.2
2,940,351	-		Sama_2442	0.84	-1.7
2,940,351	-		Sama_2442	0.84	-3.0
2,940,351	-		Sama_2442	0.84	-3.3
2,940,352	+		Sama_2442	0.84	-2.3
2,940,352	+		Sama_2442	0.84	-2.0
2,940,352	+		Sama_2442	0.84	-0.6
2,940,352	+		Sama_2442	0.84	-2.8
2,940,352	+		Sama_2442	0.84	-2.9
2,940,352	+		Sama_2442	0.84	-2.2
2,940,352	+		Sama_2442	0.84	-2.5
2,940,353	-		Sama_2442	0.84	-1.1
2,940,353	-		Sama_2442	0.84	-0.5
2,940,353	-		Sama_2442	0.84	-0.1
2,940,353	-		Sama_2442	0.84	-0.1
2,940,353	-		Sama_2442	0.84	-3.2
2,940,373	+		Sama_2442	0.86	-2.1
2,940,418	+		Sama_2442	0.89	-2.4
2,940,418	+		Sama_2442	0.89	-1.5
2,940,418	+		Sama_2442	0.89	-0.1
2,940,418	+		Sama_2442	0.89	-2.2
2,940,418	+		Sama_2442	0.89	-3.3
2,940,418	+		Sama_2442	0.89	-1.7
2,940,419	-		Sama_2442	0.89	-1.8
2,940,419	-		Sama_2442	0.89	-1.3
2,940,475	+				-2.4
2,940,475	+				-2.1
2,940,476	-				-1.9
2,940,559	+				-1.4
2,940,559	+				-2.1
2,940,560	-				-1.9
2,940,560	-				-2.6
2,940,572	+				-0.7
2,940,572	+				-3.0
2,940,572	+				-2.5
2,940,572	+				-1.8
2,940,573	-				+0.4
2,940,573	-				-1.9
2,940,573	-				-2.6
2,940,573	-				-1.3
2,940,573	-				-2.0
2,940,573	-				-3.0
2,940,573	-				-2.9
2,940,573	-				-1.2
2,940,643	+		Sama_2443	0.12	-0.3
2,940,643	+		Sama_2443	0.12	-1.6
2,940,649	+		Sama_2443	0.13	-3.4
2,940,649	+		Sama_2443	0.13	-3.1
2,940,650	-		Sama_2443	0.13	-1.4
2,940,650	-		Sama_2443	0.13	-2.1
2,940,671	+		Sama_2443	0.17	-1.5
2,940,672	-		Sama_2443	0.17	-2.7
2,940,678	+		Sama_2443	0.18	-3.1
2,940,679	-		Sama_2443	0.18	-0.7
2,940,865	+		Sama_2443	0.51	-1.2
2,940,932	+		Sama_2443	0.62	+0.1
2,940,933	-		Sama_2443	0.63	-0.6
2,940,944	+		Sama_2443	0.65	-1.2
2,940,961	+		Sama_2443	0.68	-2.8
2,940,961	+		Sama_2443	0.68	-3.8
2,940,961	+		Sama_2443	0.68	-1.1
2,940,995	+		Sama_2443	0.74	-3.3
2,940,995	+		Sama_2443	0.74	-1.2
2,940,995	+		Sama_2443	0.74	-0.6
2,940,995	+		Sama_2443	0.74	-3.6
2,940,996	-		Sama_2443	0.74	-3.8
2,940,996	-		Sama_2443	0.74	-1.2
2,940,996	-		Sama_2443	0.74	-2.9
2,941,051	+		Sama_2443	0.83	-3.0
2,941,051	+		Sama_2443	0.83	-3.6
2,941,052	-		Sama_2443	0.84	-1.4
2,941,052	-		Sama_2443	0.84	+0.1
2,941,052	-		Sama_2443	0.84	-0.7
2,941,055	+		Sama_2443	0.84	-3.6
2,941,055	+		Sama_2443	0.84	-2.9
2,941,056	-		Sama_2443	0.84	-0.4
2,941,056	-		Sama_2443	0.84	-0.9
2,941,056	-		Sama_2443	0.84	-1.0
2,941,056	-		Sama_2443	0.84	-2.9
2,941,132	+				-1.4
2,941,132	+				-2.9
2,941,133	-				-3.1
2,941,133	-				-2.0
2,941,134	+				-0.6
2,941,134	+				-1.0
2,941,134	+				-1.7
2,941,135	-				-2.5
2,941,135	-				-3.2
2,941,143	+				+0.5
2,941,143	+				+0.9
2,941,143	+				-0.5
2,941,144	-				-1.3
2,941,144	-				+0.1
2,941,159	+				-0.7
2,941,159	+				-1.8
2,941,160	-				+0.9
2,941,181	+				+0.9
2,941,181	+				+0.6
2,941,197	-				+1.5
2,941,206	-				+0.9
2,941,280	+				+0.3
2,941,378	+		Sama_2444	0.16	-2.1
2,941,378	+		Sama_2444	0.16	-1.3
2,941,383	+		Sama_2444	0.16	+0.5
2,941,383	+		Sama_2444	0.16	+1.1
2,941,477	-		Sama_2444	0.25	+0.2
2,941,509	+		Sama_2444	0.28	+1.7
2,941,509	+		Sama_2444	0.28	-0.7
2,941,510	-		Sama_2444	0.28	-1.3
2,941,510	-		Sama_2444	0.28	-2.6
2,941,510	-		Sama_2444	0.28	-1.5
2,941,510	-		Sama_2444	0.28	+0.7
2,941,510	-		Sama_2444	0.28	-0.0
2,941,510	-		Sama_2444	0.28	-0.2
2,941,543	-		Sama_2444	0.31	-0.4
2,941,550	+		Sama_2444	0.32	+1.0
2,941,551	-		Sama_2444	0.32	-0.4
2,941,586	+		Sama_2444	0.35	-3.4
2,941,586	+		Sama_2444	0.35	-0.3
2,941,587	-		Sama_2444	0.35	-0.7
2,941,587	-		Sama_2444	0.35	-0.5
2,941,587	-		Sama_2444	0.35	+0.3
2,941,598	+		Sama_2444	0.36	+1.2
2,941,598	+		Sama_2444	0.36	-1.7
2,941,611	+		Sama_2444	0.37	-1.9
2,941,611	+		Sama_2444	0.37	-0.2
2,941,611	+		Sama_2444	0.37	+1.5
2,941,612	-		Sama_2444	0.38	-1.1
2,941,613	+		Sama_2444	0.38	-0.1
2,941,613	+		Sama_2444	0.38	+0.2
2,941,613	+		Sama_2444	0.38	-2.0
2,941,613	+		Sama_2444	0.38	+1.4
2,941,613	+		Sama_2444	0.38	-1.1
2,941,613	+		Sama_2444	0.38	-0.1
2,941,614	-		Sama_2444	0.38	-0.8
2,941,614	-		Sama_2444	0.38	-0.2
2,941,614	-		Sama_2444	0.38	+0.2
2,941,614	-		Sama_2444	0.38	+0.2
2,941,614	-		Sama_2444	0.38	-0.2
2,941,614	-		Sama_2444	0.38	-0.0
2,941,614	-		Sama_2444	0.38	+0.7
2,941,614	-		Sama_2444	0.38	+1.2
2,941,614	-		Sama_2444	0.38	+0.8
2,941,621	+		Sama_2444	0.38	-0.5
2,941,622	-		Sama_2444	0.38	-1.3
2,941,622	-		Sama_2444	0.38	-1.0
2,941,634	+		Sama_2444	0.40	+0.7
2,941,634	+		Sama_2444	0.40	-0.3
2,941,635	-		Sama_2444	0.40	+0.0
2,941,635	-		Sama_2444	0.40	-0.6
2,941,635	-		Sama_2444	0.40	+0.6
2,941,635	-		Sama_2444	0.40	+0.5
2,941,636	+		Sama_2444	0.40	-1.1
2,941,637	-		Sama_2444	0.40	-1.2
2,941,637	-		Sama_2444	0.40	+1.0
2,941,637	-		Sama_2444	0.40	+1.2
2,941,637	-		Sama_2444	0.40	+0.4
2,941,637	-		Sama_2444	0.40	-0.8
2,941,637	-		Sama_2444	0.40	-1.2
2,941,637	-		Sama_2444	0.40	-2.3
2,941,637	-		Sama_2444	0.40	+0.9
2,941,655	+		Sama_2444	0.42	+0.2
2,941,655	+		Sama_2444	0.42	+0.8
2,941,659	+		Sama_2444	0.42	-0.8
2,941,660	-		Sama_2444	0.42	-0.2
2,941,671	+		Sama_2444	0.43	+1.5
2,941,671	+		Sama_2444	0.43	-1.8
2,941,672	-		Sama_2444	0.43	-0.4
2,941,672	-		Sama_2444	0.43	-1.1
2,941,691	+		Sama_2444	0.45	+0.1
2,941,691	+		Sama_2444	0.45	-0.8
2,941,691	+		Sama_2444	0.45	-0.7
2,941,691	+		Sama_2444	0.45	-0.0
2,941,692	-		Sama_2444	0.45	-0.7
2,941,692	-		Sama_2444	0.45	+0.3
2,941,716	+		Sama_2444	0.47	-0.5
2,941,717	-		Sama_2444	0.47	-0.3
2,941,717	-		Sama_2444	0.47	-0.3
2,941,742	+		Sama_2444	0.50	+0.0
2,941,742	+		Sama_2444	0.50	-1.9
2,941,743	-		Sama_2444	0.50	+0.7
2,941,761	+		Sama_2444	0.51	-0.6
2,941,763	+		Sama_2444	0.51	-0.1
2,941,763	+		Sama_2444	0.51	+1.3
2,941,763	+		Sama_2444	0.51	+0.1
2,941,763	+		Sama_2444	0.51	+0.6
2,941,763	+		Sama_2444	0.51	+0.1
2,941,764	-		Sama_2444	0.52	-0.5
2,941,764	-		Sama_2444	0.52	-0.7
2,941,764	-		Sama_2444	0.52	+0.6
2,941,764	-		Sama_2444	0.52	+0.5
2,941,769	+		Sama_2444	0.52	-2.4
2,941,769	+		Sama_2444	0.52	+0.4
2,941,770	-		Sama_2444	0.52	-0.0
2,941,770	-		Sama_2444	0.52	+1.5
2,941,784	+		Sama_2444	0.53	-0.3
2,941,784	+		Sama_2444	0.53	+0.1
2,941,784	+		Sama_2444	0.53	-0.6
2,941,785	-		Sama_2444	0.53	-0.4
2,941,785	-		Sama_2444	0.53	+1.0
2,941,785	-		Sama_2444	0.53	-0.0
2,941,785	-		Sama_2444	0.53	-1.9
2,941,785	-		Sama_2444	0.53	+0.1
2,941,785	-		Sama_2444	0.53	-0.7
2,941,787	+		Sama_2444	0.54	-0.8
2,941,787	+		Sama_2444	0.54	-0.5
2,941,787	+		Sama_2444	0.54	-0.9
2,941,788	-		Sama_2444	0.54	-0.9
2,941,788	-		Sama_2444	0.54	+0.8
2,941,788	-		Sama_2444	0.54	-0.6
2,941,821	+		Sama_2444	0.57	-0.4
2,941,821	+		Sama_2444	0.57	+1.6
2,941,822	-		Sama_2444	0.57	+1.5
2,941,822	-		Sama_2444	0.57	-0.2
2,941,827	+		Sama_2444	0.57	-1.1
2,941,829	+		Sama_2444	0.58	-0.1
2,941,829	+		Sama_2444	0.58	+0.6
2,941,830	-		Sama_2444	0.58	-0.3
2,941,830	-		Sama_2444	0.58	-1.5
2,941,883	+		Sama_2444	0.63	-1.4
2,941,903	-		Sama_2444	0.64	-0.3
2,941,979	+		Sama_2444	0.71	+0.3
2,941,980	-		Sama_2444	0.71	-1.7
2,941,980	-		Sama_2444	0.71	-2.0
2,941,980	-		Sama_2444	0.71	-0.3
2,941,980	-		Sama_2444	0.71	-0.7
2,941,980	-		Sama_2444	0.71	+0.0
2,942,080	+		Sama_2444	0.81	+1.1
2,942,081	-		Sama_2444	0.81	-0.2
2,942,091	-		Sama_2444	0.82	+0.3
2,942,132	+		Sama_2444	0.85	-0.4
2,942,133	-		Sama_2444	0.86	-0.1
2,942,133	-		Sama_2444	0.86	-1.0