Strain Fitness in Shewanella amazonensis SB2B around Sama_1659

Experiment: D-Glucosamine Hydrochloride (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucosamine Hydrochloride (N)
2,025,284	-				+0.3
2,025,284	-				+0.5
2,025,284	-				-1.7
2,025,287	+				+0.5
2,025,287	+				+0.6
2,025,287	+				+0.6
2,025,287	+				-0.2
2,025,288	-				-0.2
2,025,288	-				+1.8
2,025,288	-				-0.1
2,025,288	-				-1.1
2,025,288	-				+1.0
2,025,288	-				-1.6
2,025,288	-				-1.2
2,025,288	-				+0.3
2,025,288	-				-1.9
2,025,291	+				-1.6
2,025,291	+				+1.5
2,025,292	-				-0.1
2,025,292	-				+0.1
2,025,292	-				-0.2
2,025,292	-				-0.6
2,025,295	+				-0.9
2,025,295	+				+0.5
2,025,296	-				+0.7
2,025,296	-				-0.9
2,025,296	-				+0.9
2,025,449	+				+0.3
2,025,523	+		Sama_1658	0.12	+0.3
2,025,523	+		Sama_1658	0.12	-2.2
2,025,524	-		Sama_1658	0.12	+0.3
2,025,524	-		Sama_1658	0.12	-0.7
2,025,524	-		Sama_1658	0.12	+0.1
2,025,524	-		Sama_1658	0.12	+0.4
2,025,524	-		Sama_1658	0.12	-0.5
2,025,592	+		Sama_1658	0.22	+0.2
2,025,677	+		Sama_1658	0.35	-0.4
2,025,677	+		Sama_1658	0.35	+1.7
2,025,678	-		Sama_1658	0.35	+0.0
2,025,678	-		Sama_1658	0.35	-0.1
2,025,678	-		Sama_1658	0.35	+0.8
2,025,678	-		Sama_1658	0.35	+0.7
2,025,678	-		Sama_1658	0.35	+0.8
2,025,681	+		Sama_1658	0.36	-0.4
2,025,681	+		Sama_1658	0.36	-0.4
2,025,681	+		Sama_1658	0.36	-1.1
2,025,681	+		Sama_1658	0.36	-1.7
2,025,681	+		Sama_1658	0.36	+1.7
2,025,681	+		Sama_1658	0.36	-0.6
2,025,681	+		Sama_1658	0.36	-0.2
2,025,681	+		Sama_1658	0.36	-1.6
2,025,681	+		Sama_1658	0.36	-1.5
2,025,681	+		Sama_1658	0.36	-0.4
2,025,681	+		Sama_1658	0.36	-1.2
2,025,681	+		Sama_1658	0.36	-0.1
2,025,682	-		Sama_1658	0.36	-0.1
2,025,682	-		Sama_1658	0.36	-0.5
2,025,682	-		Sama_1658	0.36	-1.2
2,025,682	-		Sama_1658	0.36	-0.3
2,025,682	-		Sama_1658	0.36	+1.1
2,025,696	-		Sama_1658	0.38	+0.3
2,025,696	-		Sama_1658	0.38	-0.4
2,025,746	+		Sama_1658	0.45	-0.5
2,025,746	+		Sama_1658	0.45	+0.8
2,025,746	+		Sama_1658	0.45	+0.6
2,025,747	-		Sama_1658	0.46	+1.5
2,025,757	+		Sama_1658	0.47	+0.5
2,025,869	+		Sama_1658	0.64	-0.3
2,025,869	+		Sama_1658	0.64	-0.3
2,025,870	-		Sama_1658	0.64	+0.2
2,025,895	-		Sama_1658	0.68	+0.3
2,026,104	-				+0.4
2,026,186	+				+0.5
2,026,208	-				+1.1
2,026,240	+				+0.4
2,026,241	-				+0.9
2,026,242	+				-0.8
2,026,243	-				-0.3
2,026,243	-				-0.7
2,026,243	-				+1.2
2,026,243	-				-0.5
2,026,254	+				-0.6
2,026,347	-				-1.8
2,026,398	+				+1.2
2,026,399	-				-0.4
2,026,401	-				-0.7
2,026,525	+		Sama_1659	0.13	-0.6
2,026,525	+		Sama_1659	0.13	-0.7
2,026,526	-		Sama_1659	0.13	-0.4
2,026,526	-		Sama_1659	0.13	+0.7
2,026,526	-		Sama_1659	0.13	+0.5
2,026,674	+		Sama_1659	0.21	+1.7
2,026,675	-		Sama_1659	0.21	+1.5
2,026,675	-		Sama_1659	0.21	-1.6
2,026,675	-		Sama_1659	0.21	+0.4
2,026,745	-		Sama_1659	0.25	-0.5
2,026,771	+		Sama_1659	0.26	+0.4
2,026,772	-		Sama_1659	0.26	-0.0
2,026,836	-		Sama_1659	0.29	+0.3
2,026,871	+		Sama_1659	0.31	+1.4
2,026,871	+		Sama_1659	0.31	-1.8
2,026,872	-		Sama_1659	0.31	+0.4
2,026,872	-		Sama_1659	0.31	+0.3
2,026,872	-		Sama_1659	0.31	-0.4
2,026,944	+		Sama_1659	0.35	-0.2
2,026,945	-		Sama_1659	0.35	-0.6
2,026,978	+		Sama_1659	0.37	+0.8
2,027,050	+		Sama_1659	0.41	-0.5
2,027,051	-		Sama_1659	0.41	-0.6
2,027,256	+		Sama_1659	0.52	+0.4
2,027,257	-		Sama_1659	0.52	+0.5
2,027,333	+		Sama_1659	0.56	-0.3
2,027,344	+		Sama_1659	0.56	+0.0
2,027,507	-		Sama_1659	0.65	-1.9
2,027,507	-		Sama_1659	0.65	-0.7
2,027,507	-		Sama_1659	0.65	+2.7
2,027,509	+		Sama_1659	0.65	-0.7
2,027,510	-		Sama_1659	0.65	+0.5
2,027,510	-		Sama_1659	0.65	-0.9
2,027,530	+		Sama_1659	0.66	-0.9
2,027,596	+		Sama_1659	0.70	-1.5
2,027,597	-		Sama_1659	0.70	-0.0
2,027,622	+		Sama_1659	0.71	-0.3
2,027,639	+		Sama_1659	0.72	-0.6
2,027,639	+		Sama_1659	0.72	-1.6
2,027,639	+		Sama_1659	0.72	-1.4
2,027,639	+		Sama_1659	0.72	-0.5
2,027,640	-		Sama_1659	0.72	-1.5
2,027,665	-		Sama_1659	0.73	+0.2
2,027,676	-		Sama_1659	0.74	-0.5
2,027,676	-		Sama_1659	0.74	-0.4
2,027,728	+		Sama_1659	0.77	-1.2
2,027,728	+		Sama_1659	0.77	-0.4
2,027,728	+		Sama_1659	0.77	-1.6
2,027,728	+		Sama_1659	0.77	+2.2
2,027,728	+		Sama_1659	0.77	-2.1
2,027,728	+		Sama_1659	0.77	+0.0
2,027,729	-		Sama_1659	0.77	-1.5
2,027,729	-		Sama_1659	0.77	-1.9
2,027,729	-		Sama_1659	0.77	+1.3
2,027,729	-		Sama_1659	0.77	+1.1
2,027,731	+		Sama_1659	0.77	-1.3
2,027,747	-		Sama_1659	0.78	+0.2
2,027,800	+		Sama_1659	0.81	-0.9
2,027,800	+		Sama_1659	0.81	-1.4
2,027,800	+		Sama_1659	0.81	-0.1
2,027,801	-		Sama_1659	0.81	+0.5
2,027,801	-		Sama_1659	0.81	-1.2
2,027,804	+		Sama_1659	0.81	+0.7
2,027,804	+		Sama_1659	0.81	+0.6
2,027,804	+		Sama_1659	0.81	-1.0
2,027,805	-		Sama_1659	0.81	+0.2
2,027,805	-		Sama_1659	0.81	-1.0
2,027,809	+		Sama_1659	0.81	-0.9
2,027,809	+		Sama_1659	0.81	-0.6
2,027,809	+		Sama_1659	0.81	+1.7
2,027,810	-		Sama_1659	0.81	+0.0
2,027,810	-		Sama_1659	0.81	-0.4
2,027,810	-		Sama_1659	0.81	-0.8
2,027,810	-		Sama_1659	0.81	-0.5
2,027,845	+		Sama_1659	0.83	-1.5
2,027,860	-		Sama_1659	0.84	-1.0
2,027,874	-		Sama_1659	0.85	+0.3
2,027,874	-		Sama_1659	0.85	+0.8
2,027,931	+		Sama_1659	0.88	+0.1
2,027,931	+		Sama_1659	0.88	+0.5
2,027,932	-		Sama_1659	0.88	-0.3
2,027,932	-		Sama_1659	0.88	-1.3
2,027,932	-		Sama_1659	0.88	-1.6
2,027,932	-		Sama_1659	0.88	-0.3
2,027,992	+				+1.0
2,027,992	+				-0.5
2,028,051	+				+1.2
2,028,052	-				-0.9
2,028,068	+				-1.3
2,028,068	+				+1.1
2,028,069	-				-0.5
2,028,069	-				+1.2
2,028,069	-				-0.0
2,028,069	-				+0.2
2,028,080	+				-1.2
2,028,080	+				+0.0
2,028,080	+				-0.8
2,028,080	+				-0.1
2,028,081	-				-0.0
2,028,081	-				-1.4
2,028,081	-				-1.1
2,028,081	-				-0.2
2,028,251	+				-0.8
2,028,251	+				-0.0
2,028,252	-				+0.1
2,028,252	-				+1.0
2,028,320	-				-0.5
2,028,328	+				-0.2
2,028,328	+				-1.1
2,028,328	+				+0.4
2,028,328	+				-0.5
2,028,329	-				+0.1
2,028,384	+		Sama_1660	0.10	-0.1
2,028,384	+		Sama_1660	0.10	+0.5
2,028,384	+		Sama_1660	0.10	-0.9
2,028,384	+		Sama_1660	0.10	-0.4
2,028,385	-		Sama_1660	0.10	+0.7
2,028,385	-		Sama_1660	0.10	-0.5
2,028,385	-		Sama_1660	0.10	-0.9
2,028,385	-		Sama_1660	0.10	+0.2
2,028,385	-		Sama_1660	0.10	-0.1
2,028,385	-		Sama_1660	0.10	-0.4
2,028,385	-		Sama_1660	0.10	+0.4
2,028,385	-		Sama_1660	0.10	-1.3
2,028,509	+		Sama_1660	0.17	-1.3
2,028,509	+		Sama_1660	0.17	+1.3
2,028,509	+		Sama_1660	0.17	-0.1
2,028,509	+		Sama_1660	0.17	-1.7
2,028,510	-		Sama_1660	0.17	-0.3
2,028,510	-		Sama_1660	0.17	-0.0
2,028,510	-		Sama_1660	0.17	-0.1
2,028,510	-		Sama_1660	0.17	-0.1
2,028,510	-		Sama_1660	0.17	-0.8
2,028,510	-		Sama_1660	0.17	-0.6
2,028,510	-		Sama_1660	0.17	-0.4
2,028,520	+		Sama_1660	0.17	+0.6
2,028,521	-		Sama_1660	0.17	-1.2
2,028,615	+		Sama_1660	0.22	+0.6
2,028,651	+		Sama_1660	0.23	+0.9
2,028,652	-		Sama_1660	0.23	+0.5
2,028,699	+		Sama_1660	0.26	-1.4
2,028,700	-		Sama_1660	0.26	-0.2
2,028,700	-		Sama_1660	0.26	+0.1
2,028,762	+		Sama_1660	0.29	+0.8
2,028,764	-		Sama_1660	0.29	-0.3
2,028,764	-		Sama_1660	0.29	+0.2
2,028,783	+		Sama_1660	0.30	-1.1
2,028,783	+		Sama_1660	0.30	-0.1
2,028,783	+		Sama_1660	0.30	+0.8
2,028,783	+		Sama_1660	0.30	-1.2
2,028,784	-		Sama_1660	0.30	+0.3
2,028,784	-		Sama_1660	0.30	+0.7
2,028,836	+		Sama_1660	0.32	-0.6
2,028,836	+		Sama_1660	0.32	+0.8
2,028,885	+		Sama_1660	0.35	+0.2
2,028,918	+		Sama_1660	0.36	-0.2
2,028,926	+		Sama_1660	0.37	-1.0
2,028,975	+		Sama_1660	0.39	-1.2
2,029,018	+		Sama_1660	0.41	-0.0
2,029,019	-		Sama_1660	0.41	-0.4
2,029,019	-		Sama_1660	0.41	-0.7
2,029,019	-		Sama_1660	0.41	-2.0
2,029,019	-		Sama_1660	0.41	+0.2
2,029,019	-		Sama_1660	0.41	-0.4
2,029,084	+		Sama_1660	0.45	+0.6
2,029,099	-		Sama_1660	0.45	-1.6
2,029,099	-		Sama_1660	0.45	-0.7
2,029,099	-		Sama_1660	0.45	+0.1