Experiment: propionate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_2896 and Dshi_2897 are separated by 155 nucleotides Dshi_2897 and Dshi_2898 are separated by 48 nucleotides
Dshi_2896: Dshi_2896 - FAD linked oxidase domain protein (RefSeq), at 3,051,689 to 3,053,131
_2896
Dshi_2897: Dshi_2897 - hypothetical protein (RefSeq), at 3,053,287 to 3,053,973
_2897
Dshi_2898: Dshi_2898 - PUCC protein (RefSeq), at 3,054,022 to 3,055,425
_2898
Position (kb)
3053
3054 Strain fitness (log2 ratio)
-2
-1
0
1 at 3052.337 kb on - strand, within Dshi_2896 at 3052.536 kb on - strand, within Dshi_2896 at 3052.617 kb on - strand, within Dshi_2896 at 3052.693 kb on - strand, within Dshi_2896 at 3052.693 kb on - strand, within Dshi_2896 at 3052.887 kb on - strand, within Dshi_2896 at 3052.907 kb on + strand, within Dshi_2896 at 3052.993 kb on - strand at 3053.059 kb on - strand at 3053.077 kb on + strand at 3053.216 kb on - strand at 3053.265 kb on + strand at 3053.445 kb on - strand, within Dshi_2897 at 3053.532 kb on - strand, within Dshi_2897 at 3053.791 kb on - strand, within Dshi_2897 at 3053.994 kb on - strand at 3054.028 kb on - strand at 3054.064 kb on - strand at 3054.088 kb on - strand at 3054.122 kb on - strand at 3054.258 kb on + strand, within Dshi_2898 at 3054.267 kb on - strand, within Dshi_2898 at 3054.309 kb on + strand, within Dshi_2898 at 3054.309 kb on + strand, within Dshi_2898 at 3054.421 kb on - strand, within Dshi_2898 at 3054.649 kb on - strand, within Dshi_2898 at 3054.652 kb on + strand, within Dshi_2898 at 3054.660 kb on - strand, within Dshi_2898 at 3054.758 kb on - strand, within Dshi_2898 at 3054.824 kb on + strand, within Dshi_2898 at 3054.824 kb on + strand, within Dshi_2898 at 3054.832 kb on - strand, within Dshi_2898 at 3054.837 kb on - strand, within Dshi_2898 at 3054.837 kb on - strand, within Dshi_2898 at 3054.839 kb on + strand, within Dshi_2898 at 3054.879 kb on - strand, within Dshi_2898
Per-strain Table
Position Strand Gene LocusTag Fraction propionate (C) remove 3,052,337 - Dshi_2896 0.45 -0.4 3,052,536 - Dshi_2896 0.59 -0.7 3,052,617 - Dshi_2896 0.64 -0.4 3,052,693 - Dshi_2896 0.70 -1.7 3,052,693 - Dshi_2896 0.70 -0.1 3,052,887 - Dshi_2896 0.83 -0.8 3,052,907 + Dshi_2896 0.84 +0.2 3,052,993 - -0.6 3,053,059 - -2.7 3,053,077 + -0.7 3,053,216 - +0.1 3,053,265 + +0.4 3,053,445 - Dshi_2897 0.23 -0.8 3,053,532 - Dshi_2897 0.36 -0.5 3,053,791 - Dshi_2897 0.73 -2.2 3,053,994 - -1.4 3,054,028 - +0.4 3,054,064 - -0.6 3,054,088 - +0.0 3,054,122 - +0.1 3,054,258 + Dshi_2898 0.17 -0.4 3,054,267 - Dshi_2898 0.17 -0.1 3,054,309 + Dshi_2898 0.20 +0.4 3,054,309 + Dshi_2898 0.20 -0.0 3,054,421 - Dshi_2898 0.28 +0.5 3,054,649 - Dshi_2898 0.45 +1.2 3,054,652 + Dshi_2898 0.45 -0.4 3,054,660 - Dshi_2898 0.45 +0.2 3,054,758 - Dshi_2898 0.52 +0.5 3,054,824 + Dshi_2898 0.57 -0.4 3,054,824 + Dshi_2898 0.57 +1.3 3,054,832 - Dshi_2898 0.58 -2.5 3,054,837 - Dshi_2898 0.58 -1.0 3,054,837 - Dshi_2898 0.58 -0.0 3,054,839 + Dshi_2898 0.58 +1.3 3,054,879 - Dshi_2898 0.61 +0.1
Or see this region's nucleotide sequence