Experiment: propionate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0737 and Dshi_0738 are separated by 60 nucleotides Dshi_0738 and Dshi_0739 are separated by 16 nucleotides Dshi_0739 and Dshi_0740 are separated by 93 nucleotides
Dshi_0737: Dshi_0737 - heat shock protein DnaJ domain protein (RefSeq), at 743,834 to 744,517
_0737
Dshi_0738: Dshi_0738 - hypothetical protein (RefSeq), at 744,578 to 744,895
_0738
Dshi_0739: Dshi_0739 - Ppx/GppA phosphatase (RefSeq), at 744,912 to 746,432
_0739
Dshi_0740: Dshi_0740 - Polyphosphate kinase (RefSeq), at 746,526 to 748,700
_0740
Position (kb) 744
745
746
747 Strain fitness (log2 ratio) -2
-1
0
1 at 743.941 kb on - strand, within Dshi_0737 at 744.079 kb on - strand, within Dshi_0737 at 744.110 kb on + strand, within Dshi_0737 at 744.295 kb on + strand, within Dshi_0737 at 744.296 kb on + strand, within Dshi_0737 at 744.457 kb on + strand at 744.521 kb on - strand at 744.557 kb on - strand at 744.605 kb on - strand at 744.858 kb on - strand, within Dshi_0738 at 745.115 kb on - strand, within Dshi_0739 at 745.288 kb on - strand, within Dshi_0739 at 745.503 kb on + strand, within Dshi_0739 at 745.643 kb on + strand, within Dshi_0739 at 745.683 kb on - strand, within Dshi_0739 at 745.990 kb on + strand, within Dshi_0739 at 746.185 kb on - strand, within Dshi_0739 at 746.309 kb on + strand at 746.455 kb on - strand at 746.524 kb on + strand at 746.617 kb on - strand at 746.642 kb on + strand at 746.680 kb on + strand at 746.688 kb on - strand at 746.872 kb on + strand, within Dshi_0740 at 746.939 kb on - strand, within Dshi_0740 at 746.939 kb on - strand, within Dshi_0740 at 747.060 kb on - strand, within Dshi_0740 at 747.152 kb on + strand, within Dshi_0740 at 747.205 kb on - strand, within Dshi_0740 at 747.250 kb on + strand, within Dshi_0740 at 747.250 kb on + strand, within Dshi_0740 at 747.258 kb on - strand, within Dshi_0740 at 747.265 kb on + strand, within Dshi_0740 at 747.296 kb on + strand, within Dshi_0740 at 747.386 kb on - strand, within Dshi_0740
Per-strain Table
Position Strand Gene LocusTag Fraction propionate (C) remove 743,941 - Dshi_0737 0.16 -1.0 744,079 - Dshi_0737 0.36 -2.1 744,110 + Dshi_0737 0.40 -0.3 744,295 + Dshi_0737 0.67 -0.6 744,296 + Dshi_0737 0.68 -0.2 744,457 + -1.8 744,521 - +0.2 744,557 - -1.9 744,605 - +0.3 744,858 - Dshi_0738 0.88 +0.0 745,115 - Dshi_0739 0.13 -1.1 745,288 - Dshi_0739 0.25 -2.4 745,503 + Dshi_0739 0.39 -0.9 745,643 + Dshi_0739 0.48 -1.3 745,683 - Dshi_0739 0.51 -1.3 745,990 + Dshi_0739 0.71 -1.3 746,185 - Dshi_0739 0.84 -1.3 746,309 + +0.3 746,455 - +0.2 746,524 + -0.6 746,617 - -0.2 746,642 + -0.8 746,680 + -0.3 746,688 - +0.0 746,872 + Dshi_0740 0.16 -1.3 746,939 - Dshi_0740 0.19 +0.4 746,939 - Dshi_0740 0.19 +0.5 747,060 - Dshi_0740 0.25 +0.7 747,152 + Dshi_0740 0.29 +1.4 747,205 - Dshi_0740 0.31 -0.1 747,250 + Dshi_0740 0.33 -0.2 747,250 + Dshi_0740 0.33 +0.2 747,258 - Dshi_0740 0.34 -1.0 747,265 + Dshi_0740 0.34 -0.8 747,296 + Dshi_0740 0.35 +1.1 747,386 - Dshi_0740 0.40 -0.6
Or see this region's nucleotide sequence