Experiment: propionate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0728 and Dshi_0729 overlap by 4 nucleotides Dshi_0729 and Dshi_0730 overlap by 1 nucleotides Dshi_0730 and Dshi_0731 overlap by 4 nucleotides
Dshi_0728: Dshi_0728 - NADH dehydrogenase (quinone) (RefSeq), at 737,004 to 739,244
_0728
Dshi_0729: Dshi_0729 - Na+/H+ antiporter MnhB subunit-related protein (RefSeq), at 739,241 to 739,693
_0729
Dshi_0730: Dshi_0730 - NADH-ubiquinone oxidoreductase chain 4L (RefSeq), at 739,693 to 740,112
_0730
Dshi_0731: Dshi_0731 - NADH dehydrogenase (quinone) (RefSeq), at 740,109 to 741,644
_0731
Position (kb) 739
740 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 738.274 kb on - strand, within Dshi_0728 at 738.361 kb on + strand, within Dshi_0728 at 738.454 kb on + strand, within Dshi_0728 at 738.459 kb on + strand, within Dshi_0728 at 738.462 kb on - strand, within Dshi_0728 at 738.497 kb on - strand, within Dshi_0728 at 738.510 kb on - strand, within Dshi_0728 at 738.558 kb on + strand, within Dshi_0728 at 738.571 kb on + strand, within Dshi_0728 at 738.681 kb on - strand, within Dshi_0728 at 738.711 kb on + strand, within Dshi_0728 at 738.772 kb on - strand, within Dshi_0728 at 738.789 kb on - strand, within Dshi_0728 at 738.829 kb on - strand, within Dshi_0728 at 738.880 kb on + strand, within Dshi_0728 at 738.885 kb on - strand, within Dshi_0728 at 738.929 kb on + strand, within Dshi_0728 at 739.024 kb on + strand at 739.029 kb on + strand at 739.092 kb on - strand at 739.129 kb on + strand at 739.140 kb on - strand at 739.149 kb on - strand at 739.150 kb on - strand at 739.212 kb on - strand at 739.255 kb on + strand at 739.338 kb on + strand, within Dshi_0729 at 739.596 kb on + strand, within Dshi_0729 at 739.757 kb on - strand, within Dshi_0730 at 739.784 kb on + strand, within Dshi_0730 at 739.871 kb on + strand, within Dshi_0730 at 739.951 kb on + strand, within Dshi_0730 at 739.951 kb on - strand, within Dshi_0730 at 740.056 kb on + strand, within Dshi_0730 at 740.073 kb on + strand at 740.128 kb on + strand at 740.224 kb on + strand at 740.258 kb on - strand at 740.264 kb on + strand, within Dshi_0731 at 740.270 kb on - strand, within Dshi_0731 at 740.272 kb on - strand, within Dshi_0731 at 740.272 kb on - strand, within Dshi_0731 at 740.430 kb on + strand, within Dshi_0731 at 740.437 kb on + strand, within Dshi_0731 at 740.652 kb on + strand, within Dshi_0731 at 740.660 kb on + strand, within Dshi_0731
Per-strain Table
Position Strand Gene LocusTag Fraction propionate (C) remove 738,274 - Dshi_0728 0.57 +0.5 738,361 + Dshi_0728 0.61 -1.7 738,454 + Dshi_0728 0.65 -1.1 738,459 + Dshi_0728 0.65 +0.5 738,462 - Dshi_0728 0.65 -0.2 738,497 - Dshi_0728 0.67 -0.6 738,510 - Dshi_0728 0.67 -0.9 738,558 + Dshi_0728 0.69 -1.3 738,571 + Dshi_0728 0.70 -1.1 738,681 - Dshi_0728 0.75 +0.2 738,711 + Dshi_0728 0.76 -1.4 738,772 - Dshi_0728 0.79 -1.1 738,789 - Dshi_0728 0.80 -2.6 738,829 - Dshi_0728 0.81 -0.4 738,880 + Dshi_0728 0.84 -0.3 738,885 - Dshi_0728 0.84 +0.3 738,929 + Dshi_0728 0.86 -2.0 739,024 + +0.3 739,029 + -1.0 739,092 - -1.5 739,129 + -1.5 739,140 - -0.8 739,149 - -3.0 739,150 - -0.0 739,212 - -0.3 739,255 + +0.3 739,338 + Dshi_0729 0.21 -0.8 739,596 + Dshi_0729 0.78 -0.5 739,757 - Dshi_0730 0.15 +0.3 739,784 + Dshi_0730 0.22 -0.8 739,871 + Dshi_0730 0.42 +0.7 739,951 + Dshi_0730 0.61 -0.4 739,951 - Dshi_0730 0.61 -0.9 740,056 + Dshi_0730 0.86 -0.3 740,073 + +0.3 740,128 + -0.0 740,224 + -0.4 740,258 - -0.4 740,264 + Dshi_0731 0.10 +0.5 740,270 - Dshi_0731 0.10 -0.1 740,272 - Dshi_0731 0.11 -2.9 740,272 - Dshi_0731 0.11 -0.1 740,430 + Dshi_0731 0.21 +0.3 740,437 + Dshi_0731 0.21 -0.1 740,652 + Dshi_0731 0.35 +0.7 740,660 + Dshi_0731 0.36 -1.0
Or see this region's nucleotide sequence