Experiment: nitrate 250 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_0585 and Psest_0586 are separated by 9 nucleotides Psest_0586 and Psest_0587 are separated by 478 nucleotides
Psest_0584: Psest_0584 - hypothetical protein, at 635,342 to 635,644
_0584
Psest_0585: Psest_0585 - Uncharacterized protein involved in copper resistance, at 635,634 to 636,632
_0585
Psest_0586: Psest_0586 - hypothetical protein, at 636,642 to 637,451
_0586
Psest_0587: Psest_0587 - Domain of Unknown Function (DUF326)., at 637,930 to 638,259
_0587
Position (kb) 636
637
638 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 635.642 kb on + strand at 635.798 kb on + strand, within Psest_0585 at 635.799 kb on - strand, within Psest_0585 at 635.861 kb on + strand, within Psest_0585 at 635.861 kb on + strand, within Psest_0585 at 635.861 kb on + strand, within Psest_0585 at 635.861 kb on + strand, within Psest_0585 at 635.861 kb on + strand, within Psest_0585 at 635.862 kb on - strand, within Psest_0585 at 635.862 kb on - strand, within Psest_0585 at 635.862 kb on - strand, within Psest_0585 at 635.862 kb on - strand, within Psest_0585 at 635.862 kb on - strand, within Psest_0585 at 635.898 kb on - strand, within Psest_0585 at 635.942 kb on - strand, within Psest_0585 at 635.990 kb on + strand, within Psest_0585 at 635.990 kb on + strand, within Psest_0585 at 635.990 kb on + strand, within Psest_0585 at 635.990 kb on + strand, within Psest_0585 at 635.990 kb on + strand, within Psest_0585 at 635.990 kb on + strand, within Psest_0585 at 635.990 kb on + strand, within Psest_0585 at 635.990 kb on + strand, within Psest_0585 at 635.991 kb on - strand, within Psest_0585 at 635.991 kb on - strand, within Psest_0585 at 635.991 kb on - strand, within Psest_0585 at 635.991 kb on - strand, within Psest_0585 at 635.991 kb on - strand, within Psest_0585 at 635.991 kb on - strand, within Psest_0585 at 635.991 kb on - strand, within Psest_0585 at 636.007 kb on - strand, within Psest_0585 at 636.007 kb on - strand, within Psest_0585 at 636.007 kb on - strand, within Psest_0585 at 636.007 kb on - strand, within Psest_0585 at 636.007 kb on - strand, within Psest_0585 at 636.007 kb on - strand, within Psest_0585 at 636.028 kb on + strand, within Psest_0585 at 636.028 kb on + strand, within Psest_0585 at 636.029 kb on - strand, within Psest_0585 at 636.029 kb on - strand, within Psest_0585 at 636.029 kb on - strand, within Psest_0585 at 636.029 kb on - strand, within Psest_0585 at 636.029 kb on - strand, within Psest_0585 at 636.029 kb on - strand, within Psest_0585 at 636.062 kb on + strand, within Psest_0585 at 636.063 kb on - strand, within Psest_0585 at 636.063 kb on - strand, within Psest_0585 at 636.063 kb on - strand, within Psest_0585 at 636.083 kb on + strand, within Psest_0585 at 636.083 kb on + strand, within Psest_0585 at 636.084 kb on - strand, within Psest_0585 at 636.084 kb on - strand, within Psest_0585 at 636.084 kb on - strand, within Psest_0585 at 636.214 kb on + strand, within Psest_0585 at 636.236 kb on + strand, within Psest_0585 at 636.236 kb on + strand, within Psest_0585 at 636.236 kb on + strand, within Psest_0585 at 636.237 kb on - strand, within Psest_0585 at 636.291 kb on + strand, within Psest_0585 at 636.291 kb on + strand, within Psest_0585 at 636.291 kb on + strand, within Psest_0585 at 636.292 kb on - strand, within Psest_0585 at 636.294 kb on - strand, within Psest_0585 at 636.449 kb on - strand, within Psest_0585 at 636.519 kb on + strand, within Psest_0585 at 636.519 kb on + strand, within Psest_0585 at 636.519 kb on + strand, within Psest_0585 at 636.519 kb on + strand, within Psest_0585 at 636.519 kb on + strand, within Psest_0585 at 636.519 kb on + strand, within Psest_0585 at 636.520 kb on - strand, within Psest_0585 at 636.520 kb on - strand, within Psest_0585 at 636.554 kb on + strand at 636.589 kb on + strand at 636.589 kb on + strand at 636.589 kb on + strand at 636.589 kb on + strand at 636.590 kb on - strand at 636.590 kb on - strand at 636.590 kb on - strand at 636.631 kb on - strand at 636.639 kb on + strand at 636.639 kb on + strand at 636.640 kb on - strand at 636.640 kb on - strand at 636.652 kb on + strand at 636.653 kb on - strand at 636.682 kb on + strand at 636.721 kb on + strand at 636.722 kb on - strand at 636.722 kb on - strand at 636.724 kb on + strand, within Psest_0586 at 636.724 kb on + strand, within Psest_0586 at 636.724 kb on + strand, within Psest_0586 at 636.725 kb on - strand, within Psest_0586 at 636.749 kb on + strand, within Psest_0586 at 636.750 kb on - strand, within Psest_0586 at 636.817 kb on + strand, within Psest_0586 at 636.817 kb on + strand, within Psest_0586 at 636.817 kb on + strand, within Psest_0586 at 636.817 kb on + strand, within Psest_0586 at 636.817 kb on + strand, within Psest_0586 at 636.817 kb on + strand, within Psest_0586 at 636.817 kb on + strand, within Psest_0586 at 636.817 kb on + strand, within Psest_0586 at 636.817 kb on + strand, within Psest_0586 at 636.817 kb on + strand, within Psest_0586 at 636.817 kb on + strand, within Psest_0586 at 636.817 kb on + strand, within Psest_0586 at 636.817 kb on + strand, within Psest_0586 at 636.817 kb on + strand, within Psest_0586 at 636.817 kb on + strand, within Psest_0586 at 636.817 kb on + strand, within Psest_0586 at 636.817 kb on + strand, within Psest_0586 at 636.817 kb on + strand, within Psest_0586 at 636.817 kb on + strand, within Psest_0586 at 636.817 kb on + strand, within Psest_0586 at 636.817 kb on + strand, within Psest_0586 at 636.818 kb on - strand, within Psest_0586 at 636.818 kb on - strand, within Psest_0586 at 636.818 kb on - strand, within Psest_0586 at 636.818 kb on - strand, within Psest_0586 at 636.818 kb on - strand, within Psest_0586 at 636.818 kb on - strand, within Psest_0586 at 636.818 kb on - strand, within Psest_0586 at 636.818 kb on - strand, within Psest_0586 at 636.818 kb on - strand, within Psest_0586 at 636.818 kb on - strand, within Psest_0586 at 636.818 kb on - strand, within Psest_0586 at 636.870 kb on + strand, within Psest_0586 at 636.870 kb on + strand, within Psest_0586 at 636.871 kb on - strand, within Psest_0586 at 636.871 kb on - strand, within Psest_0586 at 636.871 kb on - strand, within Psest_0586 at 636.871 kb on - strand, within Psest_0586 at 636.871 kb on - strand, within Psest_0586 at 636.925 kb on + strand, within Psest_0586 at 636.926 kb on - strand, within Psest_0586 at 636.975 kb on + strand, within Psest_0586 at 636.975 kb on + strand, within Psest_0586 at 636.975 kb on + strand, within Psest_0586 at 636.975 kb on + strand, within Psest_0586 at 636.976 kb on - strand, within Psest_0586 at 636.976 kb on - strand, within Psest_0586 at 636.976 kb on - strand, within Psest_0586 at 637.020 kb on - strand, within Psest_0586 at 637.047 kb on - strand, within Psest_0586 at 637.047 kb on - strand, within Psest_0586 at 637.065 kb on + strand, within Psest_0586 at 637.066 kb on - strand, within Psest_0586 at 637.066 kb on - strand, within Psest_0586 at 637.066 kb on - strand, within Psest_0586 at 637.066 kb on - strand, within Psest_0586 at 637.108 kb on + strand, within Psest_0586 at 637.108 kb on + strand, within Psest_0586 at 637.108 kb on + strand, within Psest_0586 at 637.109 kb on - strand, within Psest_0586 at 637.187 kb on + strand, within Psest_0586 at 637.188 kb on - strand, within Psest_0586 at 637.310 kb on + strand, within Psest_0586 at 637.310 kb on + strand, within Psest_0586 at 637.310 kb on + strand, within Psest_0586 at 637.310 kb on + strand, within Psest_0586 at 637.313 kb on + strand, within Psest_0586 at 637.449 kb on + strand at 637.449 kb on + strand at 637.459 kb on + strand at 637.460 kb on - strand at 637.461 kb on + strand at 637.461 kb on + strand at 637.461 kb on + strand at 637.461 kb on + strand at 637.461 kb on + strand at 637.461 kb on + strand at 637.461 kb on + strand at 637.461 kb on + strand at 637.461 kb on + strand at 637.461 kb on + strand at 637.461 kb on + strand at 637.461 kb on + strand at 637.461 kb on + strand at 637.461 kb on + strand at 637.461 kb on + strand at 637.461 kb on + strand at 637.461 kb on + strand at 637.461 kb on + strand at 637.461 kb on + strand at 637.461 kb on + strand at 637.461 kb on + strand at 637.461 kb on + strand at 637.461 kb on + strand at 637.461 kb on + strand at 637.461 kb on + strand at 637.461 kb on + strand at 637.461 kb on + strand at 637.461 kb on + strand at 637.461 kb on + strand at 637.461 kb on + strand at 637.462 kb on - strand at 637.462 kb on - strand at 637.462 kb on - strand at 637.462 kb on - strand at 637.462 kb on - strand at 637.462 kb on - strand at 637.462 kb on - strand at 637.462 kb on - strand at 637.462 kb on - strand at 637.462 kb on - strand at 637.462 kb on - strand at 637.462 kb on - strand at 637.462 kb on - strand at 637.462 kb on - strand at 637.462 kb on - strand at 637.462 kb on - strand at 637.462 kb on - strand at 637.462 kb on - strand at 637.462 kb on - strand at 637.462 kb on - strand at 637.462 kb on - strand at 637.462 kb on - strand at 637.462 kb on - strand at 637.462 kb on - strand at 637.462 kb on - strand at 637.462 kb on - strand at 637.462 kb on - strand at 637.462 kb on - strand at 637.462 kb on - strand at 637.462 kb on - strand at 637.494 kb on - strand at 637.494 kb on - strand at 637.494 kb on - strand at 637.494 kb on - strand at 637.538 kb on + strand at 637.539 kb on - strand at 637.584 kb on - strand at 637.611 kb on + strand at 637.611 kb on + strand at 637.611 kb on + strand at 637.612 kb on - strand at 637.612 kb on - strand at 637.612 kb on - strand at 637.615 kb on + strand at 637.615 kb on + strand at 637.615 kb on + strand at 637.615 kb on + strand at 637.615 kb on + strand at 637.615 kb on + strand at 637.615 kb on + strand at 637.616 kb on - strand at 637.616 kb on - strand at 637.616 kb on - strand at 637.616 kb on - strand at 637.616 kb on - strand at 637.619 kb on + strand at 637.619 kb on + strand at 637.619 kb on + strand at 637.620 kb on - strand at 637.620 kb on - strand at 637.620 kb on - strand at 637.620 kb on - strand at 637.620 kb on - strand at 637.788 kb on + strand at 637.788 kb on + strand at 637.788 kb on + strand at 637.789 kb on - strand at 637.793 kb on + strand at 637.794 kb on - strand at 637.794 kb on - strand at 637.794 kb on - strand at 637.803 kb on + strand at 637.804 kb on - strand at 637.804 kb on - strand at 637.804 kb on - strand at 637.843 kb on + strand at 637.843 kb on + strand at 637.844 kb on - strand at 637.844 kb on - strand at 637.876 kb on + strand at 637.902 kb on + strand at 637.902 kb on + strand at 637.902 kb on + strand at 637.902 kb on + strand at 637.902 kb on + strand at 637.903 kb on - strand at 637.903 kb on - strand at 637.903 kb on - strand at 637.903 kb on - strand at 637.927 kb on + strand at 637.927 kb on + strand at 637.927 kb on + strand at 637.928 kb on - strand at 637.928 kb on - strand at 637.928 kb on - strand at 637.928 kb on - strand at 637.928 kb on - strand at 638.027 kb on + strand, within Psest_0587 at 638.117 kb on - strand, within Psest_0587 at 638.121 kb on + strand, within Psest_0587 at 638.122 kb on - strand, within Psest_0587 at 638.122 kb on - strand, within Psest_0587 at 638.122 kb on - strand, within Psest_0587 at 638.122 kb on - strand, within Psest_0587 at 638.289 kb on - strand at 638.444 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction nitrate 250 mM remove 635,642 + -0.4 635,798 + Psest_0585 0.16 -0.9 635,799 - Psest_0585 0.17 +1.4 635,861 + Psest_0585 0.23 +1.1 635,861 + Psest_0585 0.23 +1.5 635,861 + Psest_0585 0.23 -1.0 635,861 + Psest_0585 0.23 -1.6 635,861 + Psest_0585 0.23 +1.2 635,862 - Psest_0585 0.23 +0.2 635,862 - Psest_0585 0.23 -2.7 635,862 - Psest_0585 0.23 -0.0 635,862 - Psest_0585 0.23 +0.2 635,862 - Psest_0585 0.23 -0.5 635,898 - Psest_0585 0.26 -1.1 635,942 - Psest_0585 0.31 +0.1 635,990 + Psest_0585 0.36 +0.4 635,990 + Psest_0585 0.36 +0.7 635,990 + Psest_0585 0.36 +0.5 635,990 + Psest_0585 0.36 -0.4 635,990 + Psest_0585 0.36 +2.3 635,990 + Psest_0585 0.36 +0.4 635,990 + Psest_0585 0.36 +0.9 635,990 + Psest_0585 0.36 +1.0 635,991 - Psest_0585 0.36 -1.3 635,991 - Psest_0585 0.36 -1.0 635,991 - Psest_0585 0.36 +0.5 635,991 - Psest_0585 0.36 +0.6 635,991 - Psest_0585 0.36 -1.4 635,991 - Psest_0585 0.36 -1.4 635,991 - Psest_0585 0.36 -0.1 636,007 - Psest_0585 0.37 -1.0 636,007 - Psest_0585 0.37 -0.0 636,007 - Psest_0585 0.37 +0.6 636,007 - Psest_0585 0.37 +1.3 636,007 - Psest_0585 0.37 +0.0 636,007 - Psest_0585 0.37 -0.0 636,028 + Psest_0585 0.39 -0.4 636,028 + Psest_0585 0.39 -1.0 636,029 - Psest_0585 0.40 +0.4 636,029 - Psest_0585 0.40 +0.1 636,029 - Psest_0585 0.40 +0.6 636,029 - Psest_0585 0.40 +0.6 636,029 - Psest_0585 0.40 +0.3 636,029 - Psest_0585 0.40 +0.8 636,062 + Psest_0585 0.43 -0.5 636,063 - Psest_0585 0.43 -0.1 636,063 - Psest_0585 0.43 +0.4 636,063 - Psest_0585 0.43 +1.3 636,083 + Psest_0585 0.45 +0.4 636,083 + Psest_0585 0.45 -0.6 636,084 - Psest_0585 0.45 +0.4 636,084 - Psest_0585 0.45 +0.2 636,084 - Psest_0585 0.45 +0.3 636,214 + Psest_0585 0.58 +1.6 636,236 + Psest_0585 0.60 +0.2 636,236 + Psest_0585 0.60 +1.4 636,236 + Psest_0585 0.60 -0.0 636,237 - Psest_0585 0.60 -2.6 636,291 + Psest_0585 0.66 +0.7 636,291 + Psest_0585 0.66 -0.2 636,291 + Psest_0585 0.66 -1.5 636,292 - Psest_0585 0.66 -1.4 636,294 - Psest_0585 0.66 -3.2 636,449 - Psest_0585 0.82 -1.8 636,519 + Psest_0585 0.89 +1.8 636,519 + Psest_0585 0.89 -2.6 636,519 + Psest_0585 0.89 +0.7 636,519 + Psest_0585 0.89 -0.8 636,519 + Psest_0585 0.89 +2.4 636,519 + Psest_0585 0.89 +1.0 636,520 - Psest_0585 0.89 -1.8 636,520 - Psest_0585 0.89 -1.6 636,554 + -0.8 636,589 + -1.6 636,589 + -0.5 636,589 + +1.5 636,589 + -0.1 636,590 - -1.7 636,590 - -1.2 636,590 - -0.1 636,631 - -0.2 636,639 + -1.7 636,639 + -0.1 636,640 - -1.3 636,640 - -3.3 636,652 + +0.7 636,653 - -1.0 636,682 + -0.5 636,721 + -0.7 636,722 - -1.9 636,722 - -2.8 636,724 + Psest_0586 0.10 -0.6 636,724 + Psest_0586 0.10 -1.4 636,724 + Psest_0586 0.10 -1.6 636,725 - Psest_0586 0.10 +0.3 636,749 + Psest_0586 0.13 -0.3 636,750 - Psest_0586 0.13 -1.4 636,817 + Psest_0586 0.22 -1.4 636,817 + Psest_0586 0.22 -0.3 636,817 + Psest_0586 0.22 -1.8 636,817 + Psest_0586 0.22 -0.8 636,817 + Psest_0586 0.22 -1.9 636,817 + Psest_0586 0.22 -0.9 636,817 + Psest_0586 0.22 +1.3 636,817 + Psest_0586 0.22 -0.9 636,817 + Psest_0586 0.22 +0.3 636,817 + Psest_0586 0.22 -1.2 636,817 + Psest_0586 0.22 -1.8 636,817 + Psest_0586 0.22 -1.0 636,817 + Psest_0586 0.22 +0.1 636,817 + Psest_0586 0.22 +0.5 636,817 + Psest_0586 0.22 -1.0 636,817 + Psest_0586 0.22 -1.6 636,817 + Psest_0586 0.22 +2.0 636,817 + Psest_0586 0.22 -0.9 636,817 + Psest_0586 0.22 -1.0 636,817 + Psest_0586 0.22 +0.3 636,817 + Psest_0586 0.22 -2.1 636,818 - Psest_0586 0.22 +0.8 636,818 - Psest_0586 0.22 -0.6 636,818 - Psest_0586 0.22 +0.2 636,818 - Psest_0586 0.22 -0.5 636,818 - Psest_0586 0.22 -0.1 636,818 - Psest_0586 0.22 -1.2 636,818 - Psest_0586 0.22 -0.6 636,818 - Psest_0586 0.22 +0.3 636,818 - Psest_0586 0.22 -0.6 636,818 - Psest_0586 0.22 +0.2 636,818 - Psest_0586 0.22 -1.4 636,870 + Psest_0586 0.28 +0.7 636,870 + Psest_0586 0.28 +0.2 636,871 - Psest_0586 0.28 -1.4 636,871 - Psest_0586 0.28 -2.4 636,871 - Psest_0586 0.28 -0.1 636,871 - Psest_0586 0.28 -0.8 636,871 - Psest_0586 0.28 +0.7 636,925 + Psest_0586 0.35 -0.3 636,926 - Psest_0586 0.35 -1.4 636,975 + Psest_0586 0.41 -1.9 636,975 + Psest_0586 0.41 -0.6 636,975 + Psest_0586 0.41 -1.1 636,975 + Psest_0586 0.41 -1.4 636,976 - Psest_0586 0.41 -0.0 636,976 - Psest_0586 0.41 -0.3 636,976 - Psest_0586 0.41 +0.7 637,020 - Psest_0586 0.47 -0.0 637,047 - Psest_0586 0.50 -1.2 637,047 - Psest_0586 0.50 -0.9 637,065 + Psest_0586 0.52 -0.3 637,066 - Psest_0586 0.52 +0.2 637,066 - Psest_0586 0.52 +0.1 637,066 - Psest_0586 0.52 +1.3 637,066 - Psest_0586 0.52 +0.7 637,108 + Psest_0586 0.58 +0.0 637,108 + Psest_0586 0.58 +0.1 637,108 + Psest_0586 0.58 -1.9 637,109 - Psest_0586 0.58 -1.2 637,187 + Psest_0586 0.67 +0.0 637,188 - Psest_0586 0.67 -2.1 637,310 + Psest_0586 0.82 -0.1 637,310 + Psest_0586 0.82 -1.7 637,310 + Psest_0586 0.82 -0.1 637,310 + Psest_0586 0.82 -2.0 637,313 + Psest_0586 0.83 +0.7 637,449 + -0.4 637,449 + -0.9 637,459 + +1.4 637,460 - +1.6 637,461 + +1.4 637,461 + +0.7 637,461 + -1.3 637,461 + +0.2 637,461 + -1.1 637,461 + -1.4 637,461 + -1.4 637,461 + +0.0 637,461 + -0.1 637,461 + -0.0 637,461 + -0.1 637,461 + +0.5 637,461 + +1.0 637,461 + +0.6 637,461 + -0.6 637,461 + -0.5 637,461 + +2.0 637,461 + -0.7 637,461 + -0.0 637,461 + +1.3 637,461 + +0.4 637,461 + +0.4 637,461 + +0.9 637,461 + +0.6 637,461 + -0.3 637,461 + -1.1 637,461 + +0.6 637,461 + -0.5 637,461 + +1.0 637,461 + +0.6 637,462 - -1.4 637,462 - -0.0 637,462 - -2.2 637,462 - -2.5 637,462 - -2.5 637,462 - -2.3 637,462 - -2.7 637,462 - -0.6 637,462 - -0.6 637,462 - -1.2 637,462 - +0.5 637,462 - -0.8 637,462 - -1.0 637,462 - -1.7 637,462 - -0.8 637,462 - +1.7 637,462 - -0.8 637,462 - -1.0 637,462 - -0.9 637,462 - -3.7 637,462 - -1.4 637,462 - -0.7 637,462 - +1.7 637,462 - +1.0 637,462 - -1.7 637,462 - -0.8 637,462 - +1.7 637,462 - -1.0 637,462 - -1.7 637,462 - -2.6 637,494 - -2.3 637,494 - -1.9 637,494 - +0.3 637,494 - -0.4 637,538 + +2.2 637,539 - -0.6 637,584 - -1.0 637,611 + +0.0 637,611 + -0.3 637,611 + -1.5 637,612 - -0.0 637,612 - -0.4 637,612 - -2.8 637,615 + +1.5 637,615 + -0.5 637,615 + +0.3 637,615 + +0.9 637,615 + +0.2 637,615 + +2.0 637,615 + +0.7 637,616 - -1.8 637,616 - -0.7 637,616 - -2.2 637,616 - -0.8 637,616 - -1.6 637,619 + -1.7 637,619 + +1.6 637,619 + +1.7 637,620 - -0.0 637,620 - -3.2 637,620 - -2.4 637,620 - -1.1 637,620 - +0.8 637,788 + +0.4 637,788 + +0.0 637,788 + +1.3 637,789 - +1.4 637,793 + -0.4 637,794 - +1.2 637,794 - +0.2 637,794 - +0.8 637,803 + +0.5 637,804 - -2.8 637,804 - -2.9 637,804 - -0.4 637,843 + -1.2 637,843 + +2.0 637,844 - -1.8 637,844 - +0.6 637,876 + -1.3 637,902 + +0.8 637,902 + -0.3 637,902 + +0.6 637,902 + +0.3 637,902 + -0.7 637,903 - -0.4 637,903 - -1.0 637,903 - -0.6 637,903 - -0.2 637,927 + -1.7 637,927 + +2.0 637,927 + -0.4 637,928 - +1.6 637,928 - +0.9 637,928 - -0.4 637,928 - +1.4 637,928 - +2.0 638,027 + Psest_0587 0.29 +0.2 638,117 - Psest_0587 0.57 -1.9 638,121 + Psest_0587 0.58 +1.4 638,122 - Psest_0587 0.58 -0.7 638,122 - Psest_0587 0.58 -1.8 638,122 - Psest_0587 0.58 -1.6 638,122 - Psest_0587 0.58 -3.0 638,289 - -2.4 638,444 - +0.7
Or see this region's nucleotide sequence