Strain Fitness in Pseudomonas stutzeri RCH2

Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_4214

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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Per-strain Table

Position	Strand	LocusTag	Fraction	nitrate 250 mM
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4,389,668	+	Psest_4213	0.56	+0.8
4,389,668	+	Psest_4213	0.56	-1.5
4,389,668	+	Psest_4213	0.56	-1.1
4,389,669	-	Psest_4213	0.56	+0.1
4,389,669	-	Psest_4213	0.56	-0.6
4,389,669	-	Psest_4213	0.56	+0.1
4,389,678	+	Psest_4213	0.56	+0.7
4,389,679	-	Psest_4213	0.56	-0.4
4,389,679	-	Psest_4213	0.56	+0.7
4,389,679	-	Psest_4213	0.56	-1.3
4,389,714	+	Psest_4213	0.58	-1.1
4,389,715	-	Psest_4213	0.58	+1.7
4,389,715	-	Psest_4213	0.58	+0.7
4,389,715	-	Psest_4213	0.58	+0.1
4,389,715	-	Psest_4213	0.58	+1.3
4,389,715	-	Psest_4213	0.58	+0.1
4,389,770	+	Psest_4213	0.61	-0.8
4,389,770	+	Psest_4213	0.61	-0.9
4,389,770	+	Psest_4213	0.61	-2.2
4,389,771	-	Psest_4213	0.61	+1.3
4,389,771	-	Psest_4213	0.61	-1.1
4,389,783	-	Psest_4213	0.62	-0.5
4,389,785	+	Psest_4213	0.62	-1.6
4,389,786	-	Psest_4213	0.62	-0.4
4,389,786	-	Psest_4213	0.62	+0.1
4,389,786	-	Psest_4213	0.62	+0.7
4,389,786	-	Psest_4213	0.62	-0.6
4,389,786	-	Psest_4213	0.62	+0.7
4,389,786	-	Psest_4213	0.62	+2.7
4,389,786	-	Psest_4213	0.62	+0.5
4,389,786	-	Psest_4213	0.62	-1.1
4,389,786	-	Psest_4213	0.62	-0.3
4,389,786	-	Psest_4213	0.62	+0.7
4,389,786	-	Psest_4213	0.62	-0.8
4,389,786	-	Psest_4213	0.62	+1.7
4,389,786	-	Psest_4213	0.62	-0.6
4,389,786	-	Psest_4213	0.62	-0.3
4,389,786	-	Psest_4213	0.62	+0.7
4,390,107	+	Psest_4213	0.78	-0.8
4,390,108	-	Psest_4213	0.78	-1.6
4,390,108	-	Psest_4213	0.78	-0.8
4,390,125	+	Psest_4213	0.79	-0.9
4,390,126	-	Psest_4213	0.79	-0.9
4,390,161	+	Psest_4213	0.81	+1.0
4,390,161	+	Psest_4213	0.81	+0.1
4,390,162	-	Psest_4213	0.81	-0.6
4,390,194	-	Psest_4213	0.83	+1.7
4,390,272	-	Psest_4213	0.87	-0.6
4,390,501	+			-2.9
4,390,502	-			+0.5
4,390,537	+			-1.7
4,390,537	+			-1.9
4,390,537	+			+0.4
4,390,537	+			-3.5
4,390,538	-			-0.9
4,390,550	+			-3.2
4,390,593	+			-2.3
4,390,593	+			-0.3
4,390,594	-			+0.4
4,390,594	-			-2.2
4,390,594	-			-0.9
4,390,594	-			+0.6
4,390,594	-			+0.7
4,390,594	-			+0.7
4,390,594	-			+1.3
4,390,594	-			-0.4
4,390,666	+			+0.7
4,390,667	-			-1.5
4,390,741	+	Psest_4214	0.12	-1.3
4,390,742	-	Psest_4214	0.13	-0.6
4,390,742	-	Psest_4214	0.13	-1.6
4,390,743	+	Psest_4214	0.13	+1.7
4,390,744	-	Psest_4214	0.13	+0.7
4,390,744	-	Psest_4214	0.13	-0.1
4,390,744	-	Psest_4214	0.13	+1.7
4,390,794	+	Psest_4214	0.18	-0.6
4,390,794	+	Psest_4214	0.18	+1.7
4,390,794	+	Psest_4214	0.18	-1.1
4,390,794	+	Psest_4214	0.18	+1.7
4,390,795	-	Psest_4214	0.18	+0.4
4,390,795	-	Psest_4214	0.18	+1.7
4,390,795	-	Psest_4214	0.18	-2.0
4,390,795	-	Psest_4214	0.18	+0.1
4,390,821	+	Psest_4214	0.21	+0.4
4,390,821	+	Psest_4214	0.21	+0.6
4,390,822	-	Psest_4214	0.21	+0.1
4,390,822	-	Psest_4214	0.21	-0.3
4,390,822	-	Psest_4214	0.21	-0.3
4,390,923	+	Psest_4214	0.31	+0.5
4,390,923	+	Psest_4214	0.31	-0.6
4,390,923	+	Psest_4214	0.31	-0.6
4,390,923	+	Psest_4214	0.31	-0.2
4,390,923	+	Psest_4214	0.31	-0.1
4,390,923	+	Psest_4214	0.31	+0.9
4,390,924	-	Psest_4214	0.32	+0.4
4,390,924	-	Psest_4214	0.32	+1.7
4,390,924	-	Psest_4214	0.32	+1.3
4,390,924	-	Psest_4214	0.32	-1.2
4,390,979	-	Psest_4214	0.37	-0.3
4,390,979	-	Psest_4214	0.37	-1.1
4,390,980	+	Psest_4214	0.37	+2.3
4,390,980	+	Psest_4214	0.37	-1.1
4,390,980	+	Psest_4214	0.37	-1.9
4,390,980	+	Psest_4214	0.37	-1.5
4,390,980	+	Psest_4214	0.37	-1.5
4,390,980	+	Psest_4214	0.37	-2.8
4,390,980	+	Psest_4214	0.37	+0.7
4,390,980	+	Psest_4214	0.37	-1.5
4,390,980	+	Psest_4214	0.37	-1.3
4,390,980	+	Psest_4214	0.37	-1.5
4,390,980	+	Psest_4214	0.37	-1.2
4,390,981	-	Psest_4214	0.38	+0.1
4,390,981	-	Psest_4214	0.38	+2.0
4,390,981	-	Psest_4214	0.38	+0.1
4,390,981	-	Psest_4214	0.38	+0.9
4,390,981	-	Psest_4214	0.38	+0.0
4,390,981	-	Psest_4214	0.38	+0.5
4,390,981	-	Psest_4214	0.38	-0.6
4,390,981	-	Psest_4214	0.38	-1.3
4,390,981	-	Psest_4214	0.38	-0.9
4,390,981	-	Psest_4214	0.38	-0.9
4,390,981	-	Psest_4214	0.38	-1.1
4,390,981	-	Psest_4214	0.38	+1.5
4,390,981	-	Psest_4214	0.38	+0.1
4,391,026	+	Psest_4214	0.42	-0.9
4,391,037	-	Psest_4214	0.43	+0.7
4,391,084	+	Psest_4214	0.48	-0.4
4,391,085	-	Psest_4214	0.48	-1.1
4,391,132	+	Psest_4214	0.53	-1.3
4,391,137	+	Psest_4214	0.54	-0.3
4,391,162	+	Psest_4214	0.56	-0.9
4,391,162	+	Psest_4214	0.56	-1.6
4,391,162	+	Psest_4214	0.56	-1.4
4,391,162	+	Psest_4214	0.56	+1.4
4,391,162	+	Psest_4214	0.56	-1.5
4,391,162	+	Psest_4214	0.56	-2.0
4,391,162	+	Psest_4214	0.56	-1.3
4,391,163	-	Psest_4214	0.57	-1.5
4,391,163	-	Psest_4214	0.57	+0.3
4,391,163	-	Psest_4214	0.57	-0.7
4,391,163	-	Psest_4214	0.57	-1.5
4,391,165	-	Psest_4214	0.57	-0.3
4,391,208	+	Psest_4214	0.61	+0.9
4,391,273	-	Psest_4214	0.68	+1.4
4,391,288	+	Psest_4214	0.70	+0.1
4,391,288	+	Psest_4214	0.70	-2.4
4,391,288	+	Psest_4214	0.70	-0.7
4,391,288	+	Psest_4214	0.70	+0.3
4,391,306	-	Psest_4214	0.71	-2.6
4,391,320	+	Psest_4214	0.73	-1.5
4,391,320	+	Psest_4214	0.73	-1.0
4,391,321	-	Psest_4214	0.73	+0.1
4,391,329	+	Psest_4214	0.74	-1.9
4,391,329	+	Psest_4214	0.74	-0.3
4,391,329	+	Psest_4214	0.74	+0.7
4,391,330	-	Psest_4214	0.74	+0.7
4,391,363	-	Psest_4214	0.77	+1.1
4,391,402	+	Psest_4214	0.82	-2.4
4,391,402	+	Psest_4214	0.82	-2.3
4,391,435	+	Psest_4214	0.85	+2.7
4,391,446	-	Psest_4214	0.86	-1.1
4,391,446	-	Psest_4214	0.86	+0.7
4,391,446	-	Psest_4214	0.86	-0.6
4,391,446	-	Psest_4214	0.86	-0.5
4,391,446	-	Psest_4214	0.86	-2.0
4,391,456	-	Psest_4214	0.87	+0.4
4,391,570	+			-1.1
4,391,630	+			-0.3
4,391,631	-			-1.1
4,391,647	+			-1.7
4,391,647	+			+1.2
4,391,647	+			-0.6
4,391,648	-			+0.4
4,391,648	-			-1.9
4,391,693	+			-2.1
4,391,693	+			-0.6
4,391,694	-			-0.7
4,391,694	-			-1.8
4,391,698	-			-0.2
4,391,832	+			-2.3
4,391,832	+			-2.0
4,391,832	+			-0.3
4,391,832	+			-1.0
4,391,833	-			-3.3
4,391,833	-			-0.4
4,391,876	+	Psest_4215	0.11	-1.5
4,391,876	+	Psest_4215	0.11	-1.4
4,391,876	+	Psest_4215	0.11	-1.5
4,391,876	+	Psest_4215	0.11	-1.9
4,391,876	+	Psest_4215	0.11	-0.9
4,391,876	+	Psest_4215	0.11	-0.7
4,391,876	+	Psest_4215	0.11	-1.4
4,391,876	+	Psest_4215	0.11	-1.0
4,391,876	+	Psest_4215	0.11	+0.7
4,391,876	+	Psest_4215	0.11	-1.9
4,391,876	+	Psest_4215	0.11	-0.7
4,391,876	+	Psest_4215	0.11	-1.7
4,391,876	+	Psest_4215	0.11	-1.2
4,391,876	+	Psest_4215	0.11	-1.1
4,391,876	+	Psest_4215	0.11	-0.7
4,391,876	+	Psest_4215	0.11	-1.6
4,391,876	+	Psest_4215	0.11	-0.6
4,391,876	+	Psest_4215	0.11	-1.1
4,391,876	+	Psest_4215	0.11	-2.5
4,391,876	+	Psest_4215	0.11	+1.6
4,391,877	-	Psest_4215	0.11	-1.4
4,391,877	-	Psest_4215	0.11	-0.3
4,391,877	-	Psest_4215	0.11	+0.9
4,391,877	-	Psest_4215	0.11	-0.3
4,391,877	-	Psest_4215	0.11	-2.2
4,391,877	-	Psest_4215	0.11	+0.5
4,391,877	-	Psest_4215	0.11	-1.1
4,391,877	-	Psest_4215	0.11	+0.5
4,391,877	-	Psest_4215	0.11	-0.1
4,391,877	-	Psest_4215	0.11	-0.8
4,391,877	-	Psest_4215	0.11	-1.7
4,391,877	-	Psest_4215	0.11	-0.5
4,391,877	-	Psest_4215	0.11	-1.5
4,391,877	-	Psest_4215	0.11	-0.3
4,391,877	-	Psest_4215	0.11	+0.1
4,391,877	-	Psest_4215	0.11	+0.7
4,391,877	-	Psest_4215	0.11	-2.2
4,391,877	-	Psest_4215	0.11	-0.0
4,391,877	-	Psest_4215	0.11	-0.9
4,391,877	-	Psest_4215	0.11	-1.6
4,391,877	-	Psest_4215	0.11	+0.7
4,391,877	-	Psest_4215	0.11	-1.5
4,391,877	-	Psest_4215	0.11	-0.6
4,391,880	+	Psest_4215	0.12	-0.3
4,391,880	+	Psest_4215	0.12	-0.8
4,391,881	-	Psest_4215	0.12	+3.0
4,391,881	-	Psest_4215	0.12	-0.6
4,391,957	+	Psest_4215	0.14	-0.6
4,391,957	+	Psest_4215	0.14	-2.8
4,391,957	+	Psest_4215	0.14	-1.0
4,391,958	-	Psest_4215	0.15	-1.6
4,392,021	+	Psest_4215	0.17	-2.1
4,392,057	+	Psest_4215	0.18	+0.7
4,392,057	+	Psest_4215	0.18	-1.1
4,392,057	+	Psest_4215	0.18	-2.8
4,392,058	-	Psest_4215	0.18	-1.6
4,392,058	-	Psest_4215	0.18	-0.3
4,392,058	-	Psest_4215	0.18	-0.3
4,392,059	+	Psest_4215	0.18	-0.9
4,392,059	+	Psest_4215	0.18	-2.0
4,392,059	+	Psest_4215	0.18	+0.5
4,392,060	-	Psest_4215	0.18	-0.9
4,392,060	-	Psest_4215	0.18	+0.1
4,392,060	-	Psest_4215	0.18	+0.7
4,392,060	-	Psest_4215	0.18	+0.9
4,392,060	-	Psest_4215	0.18	+1.9
4,392,060	-	Psest_4215	0.18	-1.7
4,392,060	-	Psest_4215	0.18	+1.1
4,392,073	+	Psest_4215	0.19	-1.1
4,392,073	+	Psest_4215	0.19	-0.2
4,392,073	+	Psest_4215	0.19	-0.1
4,392,074	-	Psest_4215	0.19	-1.8
4,392,074	-	Psest_4215	0.19	+2.1
4,392,148	+	Psest_4215	0.22	-2.0
4,392,148	+	Psest_4215	0.22	-1.7
4,392,215	+	Psest_4215	0.24	-0.9
4,392,216	-	Psest_4215	0.24	-1.9
4,392,216	-	Psest_4215	0.24	+0.1
4,392,216	-	Psest_4215	0.24	-0.1
4,392,288	+	Psest_4215	0.27	-2.0
4,392,288	+	Psest_4215	0.27	-1.3
4,392,289	-	Psest_4215	0.27	-0.5
4,392,289	-	Psest_4215	0.27	-1.1
4,392,289	-	Psest_4215	0.27	-0.2
4,392,289	-	Psest_4215	0.27	+1.0
4,392,289	-	Psest_4215	0.27	-0.1
4,392,290	+	Psest_4215	0.27	-1.6
4,392,291	-	Psest_4215	0.27	+0.3
4,392,322	+	Psest_4215	0.28	-1.7
4,392,322	+	Psest_4215	0.28	-1.6
4,392,322	+	Psest_4215	0.28	-2.1
4,392,322	+	Psest_4215	0.28	-0.8
4,392,322	+	Psest_4215	0.28	-0.3
4,392,322	+	Psest_4215	0.28	+1.0
4,392,323	-	Psest_4215	0.28	+0.0
4,392,323	-	Psest_4215	0.28	+0.1
4,392,323	-	Psest_4215	0.28	-2.3
4,392,323	-	Psest_4215	0.28	-0.9
4,392,323	-	Psest_4215	0.28	+0.1
4,392,323	-	Psest_4215	0.28	+1.7
4,392,323	-	Psest_4215	0.28	-1.1
4,392,323	-	Psest_4215	0.28	-0.4
4,392,349	+	Psest_4215	0.29	-0.3
4,392,349	+	Psest_4215	0.29	-1.9
4,392,350	-	Psest_4215	0.29	+0.3
4,392,350	-	Psest_4215	0.29	+0.7
4,392,350	-	Psest_4215	0.29	-0.5
4,392,350	-	Psest_4215	0.29	-1.0
4,392,406	+	Psest_4215	0.31	-1.9
4,392,406	+	Psest_4215	0.31	-2.5
4,392,406	+	Psest_4215	0.31	-1.6
4,392,406	+	Psest_4215	0.31	-0.7
4,392,406	+	Psest_4215	0.31	-1.7
4,392,406	+	Psest_4215	0.31	-0.2
4,392,406	+	Psest_4215	0.31	-1.0
4,392,406	+	Psest_4215	0.31	-0.7
4,392,406	+	Psest_4215	0.31	-3.4
4,392,406	+	Psest_4215	0.31	-1.5
4,392,406	+	Psest_4215	0.31	-0.1
4,392,406	+	Psest_4215	0.31	-0.3
4,392,406	+	Psest_4215	0.31	-1.3
4,392,406	+	Psest_4215	0.31	-1.6
4,392,406	+	Psest_4215	0.31	-1.7
4,392,406	+	Psest_4215	0.31	+1.1
4,392,407	-	Psest_4215	0.31	-0.1
4,392,407	-	Psest_4215	0.31	-0.5
4,392,407	-	Psest_4215	0.31	-0.6
4,392,407	-	Psest_4215	0.31	-1.3
4,392,407	-	Psest_4215	0.31	-0.9
4,392,407	-	Psest_4215	0.31	+0.7
4,392,407	-	Psest_4215	0.31	+0.4
4,392,407	-	Psest_4215	0.31	+1.3
4,392,407	-	Psest_4215	0.31	-0.2
4,392,407	-	Psest_4215	0.31	-0.5
4,392,407	-	Psest_4215	0.31	+0.3
4,392,407	-	Psest_4215	0.31	-0.1
4,392,407	-	Psest_4215	0.31	-1.1
4,392,407	-	Psest_4215	0.31	+1.7
4,392,407	-	Psest_4215	0.31	+0.5
4,392,407	-	Psest_4215	0.31	+0.9
4,392,407	-	Psest_4215	0.31	-1.1
4,392,407	-	Psest_4215	0.31	-1.3
4,392,408	+	Psest_4215	0.31	+0.7
4,392,408	+	Psest_4215	0.31	-1.7
4,392,408	+	Psest_4215	0.31	-1.4
4,392,408	+	Psest_4215	0.31	-1.1
4,392,408	+	Psest_4215	0.31	-0.0
4,392,408	+	Psest_4215	0.31	-0.1
4,392,408	+	Psest_4215	0.31	-1.6
4,392,408	+	Psest_4215	0.31	-1.5
4,392,408	+	Psest_4215	0.31	-0.4
4,392,408	+	Psest_4215	0.31	-0.6
4,392,408	+	Psest_4215	0.31	-0.7
4,392,408	+	Psest_4215	0.31	-0.9
4,392,408	+	Psest_4215	0.31	-2.3
4,392,408	+	Psest_4215	0.31	-2.8
4,392,408	+	Psest_4215	0.31	-0.8
4,392,408	+	Psest_4215	0.31	-1.3
4,392,408	+	Psest_4215	0.31	-0.7
4,392,408	+	Psest_4215	0.31	-0.4
4,392,408	+	Psest_4215	0.31	-2.5
4,392,408	+	Psest_4215	0.31	-0.1
4,392,408	+	Psest_4215	0.31	-2.1
4,392,408	+	Psest_4215	0.31	+2.1
4,392,408	+	Psest_4215	0.31	-0.9
4,392,408	+	Psest_4215	0.31	-1.1
4,392,408	+	Psest_4215	0.31	+0.1
4,392,408	+	Psest_4215	0.31	-0.3
4,392,409	-	Psest_4215	0.31	-0.5
4,392,409	-	Psest_4215	0.31	-0.2
4,392,409	-	Psest_4215	0.31	-0.5
4,392,409	-	Psest_4215	0.31	+0.7
4,392,409	-	Psest_4215	0.31	+0.4
4,392,409	-	Psest_4215	0.31	+0.7
4,392,409	-	Psest_4215	0.31	-1.6
4,392,409	-	Psest_4215	0.31	-1.5
4,392,409	-	Psest_4215	0.31	+0.3
4,392,409	-	Psest_4215	0.31	+0.5
4,392,409	-	Psest_4215	0.31	-0.3
4,392,409	-	Psest_4215	0.31	+0.2
4,392,409	-	Psest_4215	0.31	-1.3
4,392,409	-	Psest_4215	0.31	-1.0
4,392,409	-	Psest_4215	0.31	+0.2
4,392,466	+	Psest_4215	0.33	+1.7
4,392,466	+	Psest_4215	0.33	-2.9
4,392,467	-	Psest_4215	0.33	-1.7
4,392,467	-	Psest_4215	0.33	+0.7
4,392,487	-	Psest_4215	0.34	+0.4
4,392,547	+	Psest_4215	0.36	+0.7
4,392,553	+	Psest_4215	0.37	-1.7
4,392,566	-	Psest_4215	0.37	-1.9
4,392,567	+	Psest_4215	0.37	-0.9
4,392,567	+	Psest_4215	0.37	-1.1
4,392,567	+	Psest_4215	0.37	-0.3
4,392,567	+	Psest_4215	0.37	+0.6
4,392,567	+	Psest_4215	0.37	+0.7
4,392,568	-	Psest_4215	0.37	-0.9
4,392,568	-	Psest_4215	0.37	-2.0

Or see this region's nucleotide sequence