Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_4047

Experiment: nitrate 250 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrate 250 mM
4,219,326	+		Psest_4046	0.20	+0.1
4,219,326	+		Psest_4046	0.20	-0.0
4,219,326	+		Psest_4046	0.20	-2.0
4,219,326	+		Psest_4046	0.20	+0.4
4,219,326	+		Psest_4046	0.20	-0.1
4,219,327	-		Psest_4046	0.20	-0.5
4,219,366	+		Psest_4046	0.23	-0.6
4,219,366	+		Psest_4046	0.23	-1.3
4,219,366	+		Psest_4046	0.23	-0.8
4,219,372	+		Psest_4046	0.24	-1.1
4,219,373	-		Psest_4046	0.24	-2.4
4,219,373	-		Psest_4046	0.24	+1.0
4,219,373	-		Psest_4046	0.24	+1.1
4,219,390	-		Psest_4046	0.25	-0.0
4,219,458	-		Psest_4046	0.31	-1.0
4,219,566	+		Psest_4046	0.40	-1.4
4,219,566	+		Psest_4046	0.40	-0.4
4,219,566	+		Psest_4046	0.40	-1.6
4,219,566	+		Psest_4046	0.40	-1.7
4,219,590	+		Psest_4046	0.42	+1.1
4,219,590	+		Psest_4046	0.42	-0.8
4,219,590	+		Psest_4046	0.42	-3.0
4,219,590	+		Psest_4046	0.42	-1.2
4,219,590	+		Psest_4046	0.42	+0.5
4,219,590	+		Psest_4046	0.42	-1.5
4,219,590	+		Psest_4046	0.42	-1.2
4,219,590	+		Psest_4046	0.42	-2.5
4,219,590	+		Psest_4046	0.42	+1.4
4,219,590	+		Psest_4046	0.42	-2.9
4,219,591	-		Psest_4046	0.43	+0.1
4,219,591	-		Psest_4046	0.43	+1.2
4,219,591	-		Psest_4046	0.43	+0.2
4,219,591	-		Psest_4046	0.43	-2.0
4,219,591	-		Psest_4046	0.43	-2.1
4,219,591	-		Psest_4046	0.43	-2.4
4,219,591	-		Psest_4046	0.43	-0.2
4,219,591	-		Psest_4046	0.43	+0.2
4,219,591	-		Psest_4046	0.43	-1.7
4,219,591	-		Psest_4046	0.43	-1.0
4,219,591	-		Psest_4046	0.43	+0.4
4,219,592	+		Psest_4046	0.43	+2.0
4,219,592	+		Psest_4046	0.43	-1.9
4,219,592	+		Psest_4046	0.43	-2.0
4,219,592	+		Psest_4046	0.43	-0.0
4,219,592	+		Psest_4046	0.43	-2.3
4,219,592	+		Psest_4046	0.43	-0.8
4,219,592	+		Psest_4046	0.43	-0.5
4,219,592	+		Psest_4046	0.43	-0.0
4,219,592	+		Psest_4046	0.43	-0.1
4,219,593	-		Psest_4046	0.43	-1.9
4,219,593	-		Psest_4046	0.43	-1.0
4,219,593	-		Psest_4046	0.43	-1.0
4,219,593	-		Psest_4046	0.43	+1.6
4,219,593	-		Psest_4046	0.43	-1.6
4,219,593	-		Psest_4046	0.43	-1.4
4,219,593	-		Psest_4046	0.43	-1.7
4,219,771	+		Psest_4046	0.58	-0.5
4,219,771	+		Psest_4046	0.58	+0.8
4,219,771	+		Psest_4046	0.58	-1.4
4,219,771	+		Psest_4046	0.58	-1.0
4,219,771	+		Psest_4046	0.58	-0.7
4,219,771	+		Psest_4046	0.58	-0.4
4,219,771	+		Psest_4046	0.58	-0.7
4,219,771	+		Psest_4046	0.58	+1.0
4,219,771	+		Psest_4046	0.58	+0.2
4,219,771	+		Psest_4046	0.58	-2.3
4,219,771	+		Psest_4046	0.58	-1.5
4,219,771	+		Psest_4046	0.58	+0.8
4,219,771	+		Psest_4046	0.58	-0.9
4,219,771	+		Psest_4046	0.58	-1.1
4,219,771	+		Psest_4046	0.58	-2.6
4,219,771	+		Psest_4046	0.58	-1.0
4,219,771	+		Psest_4046	0.58	-0.5
4,219,772	-		Psest_4046	0.58	+1.3
4,219,772	-		Psest_4046	0.58	-0.8
4,219,772	-		Psest_4046	0.58	-2.0
4,219,772	-		Psest_4046	0.58	-0.3
4,219,772	-		Psest_4046	0.58	-0.5
4,219,772	-		Psest_4046	0.58	-0.6
4,219,772	-		Psest_4046	0.58	-2.3
4,219,772	-		Psest_4046	0.58	+0.2
4,219,772	-		Psest_4046	0.58	+0.4
4,219,772	-		Psest_4046	0.58	-2.8
4,219,772	-		Psest_4046	0.58	-0.9
4,219,774	+		Psest_4046	0.58	-1.1
4,219,774	+		Psest_4046	0.58	-0.8
4,219,774	+		Psest_4046	0.58	-1.0
4,219,775	-		Psest_4046	0.58	-1.9
4,219,775	-		Psest_4046	0.58	-2.0
4,219,775	-		Psest_4046	0.58	-0.3
4,219,775	-		Psest_4046	0.58	-1.8
4,219,789	+				+1.8
4,219,789	+		Psest_4046	0.59	+0.1
4,219,790	-		Psest_4046	0.60	-1.0
4,219,790	-		Psest_4046	0.60	-2.8
4,219,790	-		Psest_4046	0.60	-1.9
4,219,790	-		Psest_4046	0.60	-0.9
4,219,790	-		Psest_4046	0.60	-2.3
4,219,790	-		Psest_4046	0.60	-0.2
4,219,790	-		Psest_4046	0.60	-1.1
4,219,790	-		Psest_4046	0.60	-1.6
4,219,790	-		Psest_4046	0.60	+1.2
4,219,790	-		Psest_4046	0.60	+0.2
4,219,790	-		Psest_4046	0.60	-2.4
4,219,794	-		Psest_4046	0.60	+0.5
4,219,899	+		Psest_4046	0.69	-1.0
4,219,899	+		Psest_4046	0.69	+0.2
4,219,900	-		Psest_4046	0.69	-1.0
4,219,900	-		Psest_4046	0.69	-0.4
4,219,900	-		Psest_4046	0.69	-1.2
4,219,900	-		Psest_4046	0.69	+0.3
4,219,900	-		Psest_4046	0.69	-1.5
4,219,951	+		Psest_4046	0.73	+0.2
4,219,951	+		Psest_4046	0.73	-1.1
4,219,952	-		Psest_4046	0.73	-1.2
4,219,952	-		Psest_4046	0.73	-0.4
4,219,952	-		Psest_4046	0.73	-0.0
4,219,992	+		Psest_4046	0.77	-0.1
4,220,082	-		Psest_4046	0.85	-0.3
4,220,095	+		Psest_4046	0.86	-0.3
4,220,095	+		Psest_4046	0.86	-2.8
4,220,096	-		Psest_4046	0.86	-1.5
4,220,096	-		Psest_4046	0.86	-0.4
4,220,096	-		Psest_4046	0.86	-1.7
4,220,096	-		Psest_4046	0.86	-1.6
4,220,096	-		Psest_4046	0.86	-0.4
4,220,096	-		Psest_4046	0.86	-0.4
4,220,096	-		Psest_4046	0.86	-0.0
4,220,108	+		Psest_4046	0.87	+0.7
4,220,109	-		Psest_4046	0.87	-0.5
4,220,136	+		Psest_4046	0.89	-1.8
4,220,136	+		Psest_4046	0.89	-0.2
4,220,137	-		Psest_4046	0.89	-1.9
4,220,137	-		Psest_4046	0.89	-1.7
4,220,192	+				-2.3
4,220,192	+				-2.6
4,220,192	+				-1.3
4,220,193	-				+0.4
4,220,254	+				-0.8
4,220,254	+				-1.9
4,220,254	+				-1.1
4,220,254	+				-1.1
4,220,254	+				+0.2
4,220,254	+				-1.9
4,220,254	+				-0.2
4,220,255	-				-0.1
4,220,255	-				+1.2
4,220,255	-				+2.5
4,220,255	-				+1.1
4,220,255	-				-0.9
4,220,255	-				+0.0
4,220,255	-				+0.8
4,220,255	-				-0.9
4,220,255	-				-1.4
4,220,256	+				-2.4
4,220,256	+				-1.8
4,220,256	+				-3.0
4,220,451	+		Psest_4047	0.13	-2.0
4,220,452	-		Psest_4047	0.13	+0.4
4,220,538	+		Psest_4047	0.19	-1.6
4,220,538	+		Psest_4047	0.19	+1.2
4,220,573	+		Psest_4047	0.22	+0.8
4,220,882	+		Psest_4047	0.44	-0.7
4,220,946	+		Psest_4047	0.48	+0.3
4,220,946	+		Psest_4047	0.48	-0.4
4,220,946	+		Psest_4047	0.48	+0.9
4,220,946	+		Psest_4047	0.48	+0.2
4,220,946	+		Psest_4047	0.48	-0.2
4,221,192	+		Psest_4047	0.65	+0.1
4,221,192	+		Psest_4047	0.65	+1.3
4,221,193	-		Psest_4047	0.65	+1.2
4,221,213	+		Psest_4047	0.67	-0.1
4,221,269	+		Psest_4047	0.71	-3.6
4,221,269	+		Psest_4047	0.71	-1.5
4,221,269	+		Psest_4047	0.71	-2.7
4,221,270	-		Psest_4047	0.71	+2.0
4,221,270	-		Psest_4047	0.71	-2.9
4,221,387	+		Psest_4047	0.79	-1.5
4,221,388	-		Psest_4047	0.79	-1.5
4,221,388	-		Psest_4047	0.79	-2.8
4,221,460	-		Psest_4047	0.84	-0.8
4,221,463	-		Psest_4047	0.84	+0.3
4,221,463	-		Psest_4047	0.84	-1.7
4,221,463	-		Psest_4047	0.84	+0.1
4,221,463	-		Psest_4047	0.84	-0.5
4,221,463	-		Psest_4047	0.84	-1.2
4,221,463	-		Psest_4047	0.84	-2.2
4,221,471	-		Psest_4047	0.85	-1.0
4,221,478	+		Psest_4047	0.86	-0.2
4,221,542	-				-1.4
4,221,556	+				-1.3
4,221,557	-				+1.6
4,221,614	+				-1.8
4,221,820	+				-1.4
4,221,821	-				-0.8
4,221,821	-				+1.1
4,221,821	-				-2.2
4,221,821	-				+0.2
4,221,821	-				-1.2
4,221,905	+		Psest_4048	0.14	-1.2
4,221,905	+		Psest_4048	0.14	+1.6
4,221,905	+		Psest_4048	0.14	-0.0
4,221,993	+		Psest_4048	0.19	-1.2
4,221,993	+		Psest_4048	0.19	-0.7
4,221,993	+		Psest_4048	0.19	+0.0
4,221,995	+		Psest_4048	0.19	-1.0
4,221,995	+		Psest_4048	0.19	+0.2
4,221,995	+		Psest_4048	0.19	-0.3
4,222,077	+		Psest_4048	0.24	-1.5
4,222,077	+		Psest_4048	0.24	+1.2
4,222,160	+		Psest_4048	0.28	+0.7
4,222,160	+		Psest_4048	0.28	-1.4
4,222,160	+		Psest_4048	0.28	-0.3
4,222,160	+		Psest_4048	0.28	-0.6
4,222,160	+		Psest_4048	0.28	-0.3
4,222,160	+		Psest_4048	0.28	-0.3
4,222,160	+		Psest_4048	0.28	+1.3
4,222,160	+		Psest_4048	0.28	-1.2
4,222,160	+		Psest_4048	0.28	-2.1
4,222,160	+		Psest_4048	0.28	-0.7
4,222,160	+		Psest_4048	0.28	-1.4
4,222,161	-		Psest_4048	0.28	-2.1
4,222,245	+		Psest_4048	0.33	+1.2
4,222,245	+		Psest_4048	0.33	-1.4
4,222,268	+		Psest_4048	0.35	-0.1
4,222,275	+		Psest_4048	0.35	+0.0
4,222,275	+		Psest_4048	0.35	-0.8
4,222,275	+		Psest_4048	0.35	-1.5
4,222,275	+		Psest_4048	0.35	-1.7
4,222,275	+		Psest_4048	0.35	-1.0
4,222,275	+		Psest_4048	0.35	-1.0
4,222,275	+		Psest_4048	0.35	+0.6
4,222,275	+		Psest_4048	0.35	+0.7
4,222,275	+		Psest_4048	0.35	-0.6
4,222,275	+		Psest_4048	0.35	-0.6
4,222,275	+		Psest_4048	0.35	-1.2
4,222,275	+		Psest_4048	0.35	+0.2
4,222,275	+		Psest_4048	0.35	-1.7
4,222,276	-		Psest_4048	0.35	-0.5
4,222,276	-		Psest_4048	0.35	+0.6
4,222,276	-		Psest_4048	0.35	-0.8
4,222,276	-		Psest_4048	0.35	-1.7
4,222,276	-		Psest_4048	0.35	-3.1
4,222,276	-		Psest_4048	0.35	-2.3
4,222,276	-		Psest_4048	0.35	-2.5
4,222,276	-		Psest_4048	0.35	-0.5
4,222,276	-		Psest_4048	0.35	-0.2
4,222,276	-		Psest_4048	0.35	-0.8
4,222,276	-		Psest_4048	0.35	-2.6
4,222,276	-		Psest_4048	0.35	-0.2
4,222,276	-		Psest_4048	0.35	-1.2
4,222,276	-		Psest_4048	0.35	-1.2
4,222,276	-		Psest_4048	0.35	-1.7
4,222,371	+		Psest_4048	0.41	+2.4
4,222,397	+		Psest_4048	0.42	-0.7
4,222,397	+		Psest_4048	0.42	-1.1
4,222,397	+		Psest_4048	0.42	-0.2
4,222,397	+		Psest_4048	0.42	+1.1
4,222,398	-		Psest_4048	0.42	-0.1
4,222,398	-		Psest_4048	0.42	-1.0
4,222,398	-		Psest_4048	0.42	-2.7
4,222,398	-		Psest_4048	0.42	-0.1
4,222,533	-		Psest_4048	0.50	-3.2
4,222,555	-		Psest_4048	0.51	+1.1
4,222,637	+		Psest_4048	0.56	+0.3
4,222,638	-		Psest_4048	0.56	+0.9