Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3442

Experiment: nitrate 250 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrate 250 mM
3,611,491	+		Psest_3441	0.22	-0.2
3,611,617	+		Psest_3441	0.34	+0.1
3,611,618	-		Psest_3441	0.34	-0.1
3,611,618	-		Psest_3441	0.34	+1.0
3,611,621	-		Psest_3441	0.34	-0.7
3,611,629	+		Psest_3441	0.35	+0.2
3,611,629	+		Psest_3441	0.35	+1.5
3,611,629	+		Psest_3441	0.35	-0.7
3,611,630	-		Psest_3441	0.35	+0.1
3,611,783	-		Psest_3441	0.50	+0.9
3,611,783	-		Psest_3441	0.50	+2.9
3,611,784	+		Psest_3441	0.50	-0.4
3,611,784	+		Psest_3441	0.50	-2.3
3,611,784	+		Psest_3441	0.50	+1.2
3,611,784	+		Psest_3441	0.50	+0.1
3,611,784	+		Psest_3441	0.50	+0.2
3,611,784	+		Psest_3441	0.50	-0.4
3,611,784	+		Psest_3441	0.50	+1.2
3,611,784	+		Psest_3441	0.50	-0.2
3,611,784	+		Psest_3441	0.50	+1.4
3,611,784	+		Psest_3441	0.50	+0.5
3,611,784	+		Psest_3441	0.50	+0.9
3,611,784	+		Psest_3441	0.50	+1.2
3,611,785	-		Psest_3441	0.50	-0.8
3,611,785	-		Psest_3441	0.50	+0.6
3,611,785	-		Psest_3441	0.50	+0.1
3,611,785	-		Psest_3441	0.50	+0.1
3,611,785	-		Psest_3441	0.50	-0.1
3,611,785	-		Psest_3441	0.50	-1.1
3,611,785	-		Psest_3441	0.50	-1.6
3,611,785	-		Psest_3441	0.50	-0.6
3,611,785	-		Psest_3441	0.50	-0.3
3,611,785	-		Psest_3441	0.50	+0.3
3,611,785	-		Psest_3441	0.50	+2.8
3,611,785	-		Psest_3441	0.50	+0.8
3,611,785	-		Psest_3441	0.50	-1.5
3,611,785	-		Psest_3441	0.50	-0.8
3,611,785	-		Psest_3441	0.50	-2.6
3,611,785	-		Psest_3441	0.50	-0.7
3,611,951	-		Psest_3441	0.66	-0.3
3,612,060	+		Psest_3441	0.76	-0.6
3,612,061	-		Psest_3441	0.76	+0.3
3,612,103	+		Psest_3441	0.80	+0.5
3,612,158	+		Psest_3441	0.86	-0.2
3,612,159	-		Psest_3441	0.86	+0.2
3,612,159	-		Psest_3441	0.86	-0.4
3,612,159	-		Psest_3441	0.86	-0.6
3,612,159	-		Psest_3441	0.86	-0.3
3,612,159	-		Psest_3441	0.86	-1.6
3,612,160	+		Psest_3441	0.86	+1.1
3,612,160	+		Psest_3441	0.86	-0.9
3,612,160	+		Psest_3441	0.86	-0.6
3,612,160	+		Psest_3441	0.86	+1.2
3,612,160	+		Psest_3441	0.86	-1.4
3,612,161	-		Psest_3441	0.86	+1.9
3,612,161	-		Psest_3441	0.86	+0.9
3,612,161	-		Psest_3441	0.86	-1.9
3,612,161	-		Psest_3441	0.86	-1.3
3,612,161	-		Psest_3441	0.86	-0.5
3,612,161	-		Psest_3441	0.86	-1.3
3,612,161	-		Psest_3441	0.86	+1.1
3,612,161	-		Psest_3441	0.86	+1.7
3,612,469	+		Psest_3442	0.15	+1.2
3,612,469	+		Psest_3442	0.15	-1.5
3,612,469	+		Psest_3442	0.15	+2.0
3,612,469	+		Psest_3442	0.15	+1.7
3,612,470	-		Psest_3442	0.15	-0.7
3,612,470	-		Psest_3442	0.15	+0.6
3,612,470	-		Psest_3442	0.15	-0.1
3,612,470	-		Psest_3442	0.15	-0.1
3,612,470	-		Psest_3442	0.15	-0.9
3,612,470	-		Psest_3442	0.15	-1.0
3,612,576	+		Psest_3442	0.25	+0.3
3,612,660	+		Psest_3442	0.33	+0.1
3,612,660	+		Psest_3442	0.33	+0.3
3,612,661	-		Psest_3442	0.33	+2.4
3,612,661	-		Psest_3442	0.33	+1.0
3,612,661	-		Psest_3442	0.33	-0.0
3,612,673	-		Psest_3442	0.34	+0.3
3,612,684	+		Psest_3442	0.35	+1.5
3,612,685	-		Psest_3442	0.35	+1.2
3,612,838	-		Psest_3442	0.49	+0.4
3,613,053	+		Psest_3442	0.69	+1.1
3,613,053	+		Psest_3442	0.69	+0.6
3,613,158	+		Psest_3442	0.78	+0.1
3,613,158	+		Psest_3442	0.78	-2.3
3,613,158	+		Psest_3442	0.78	+1.5
3,613,158	+		Psest_3442	0.78	+1.9
3,613,159	-		Psest_3442	0.78	+0.1
3,613,159	-		Psest_3442	0.78	-0.5
3,613,159	-		Psest_3442	0.78	-0.6
3,613,180	-		Psest_3442	0.80	-0.2
3,613,180	-		Psest_3442	0.80	-0.5
3,613,215	+		Psest_3442	0.84	+1.7
3,613,215	+		Psest_3442	0.84	-0.7
3,613,215	+		Psest_3442	0.84	-0.6
3,613,215	+		Psest_3442	0.84	-0.5
3,613,216	-		Psest_3442	0.84	+1.4
3,613,216	-		Psest_3442	0.84	+1.4
3,613,216	-		Psest_3442	0.84	+1.8
3,613,427	-				+0.8
3,613,516	+				+0.1
3,613,516	+				-0.1
3,613,517	-				+1.7
3,613,517	-				+0.5
3,613,517	-				-0.1
3,613,617	+				-0.2
3,613,617	+				+3.1
3,613,617	+				-1.6
3,613,617	+				-0.4
3,613,617	+				-0.5
3,613,617	+				+1.8
3,613,617	+				-0.2
3,613,617	+				-0.7
3,613,617	+				-0.6
3,613,617	+				+1.0
3,613,617	+				+0.3
3,613,617	+				-0.7
3,613,617	+				-0.9
3,613,617	+				-1.8
3,613,617	+				-0.2
3,613,617	+				-1.1
3,613,617	+				-2.2
3,613,617	+				+0.5
3,613,617	+				-1.5
3,613,617	+				-1.4
3,613,617	+				-0.1
3,613,617	+				-2.1
3,613,617	+				+0.1
3,613,617	+				-0.5
3,613,617	+				-1.1
3,613,617	+				-1.7
3,613,617	+				+2.1
3,613,617	+				-1.1
3,613,617	+				-1.6
3,613,617	+				+0.5
3,613,617	+				-0.2
3,613,618	-				-0.3
3,613,618	-				+0.1
3,613,618	-				-2.1
3,613,618	-				+0.3
3,613,618	-				-1.8
3,613,618	-				+2.9
3,613,618	-				+0.7
3,613,618	-				+1.0
3,613,618	-				-1.9
3,613,618	-				+0.5
3,613,618	-				-0.8
3,613,618	-				+0.5
3,613,618	-				+0.1
3,613,618	-				-1.1
3,613,618	-				+0.1
3,613,618	-				-1.1
3,613,618	-				+0.1
3,613,618	-				+0.1
3,613,618	-				+1.3
3,613,618	-				-0.4
3,613,618	-				-0.3
3,613,618	-				-0.3
3,613,618	-				-1.2
3,613,618	-				+0.4
3,613,618	-				+0.4
3,613,618	-				-1.1
3,613,618	-				+0.8
3,613,618	-				+0.4
3,613,618	-				+1.4
3,613,618	-				-0.9
3,613,618	-				+0.3
3,613,618	-				+0.9
3,613,618	-				+1.7
3,613,618	-				+0.3
3,613,618	-				-0.5
3,613,618	-				+0.9
3,613,618	-				-1.0
3,613,621	+				-1.7
3,613,621	+				+0.5
3,613,621	+				-0.9
3,613,621	+				-1.0
3,613,621	+				+0.4
3,613,621	+				-1.8
3,613,621	+				-0.4
3,613,621	+				-1.5
3,613,621	+				-1.6
3,613,621	+				+0.9
3,613,621	+				-1.4
3,613,621	+				-0.2
3,613,621	+				-1.3
3,613,621	+				-1.4
3,613,621	+				-1.4
3,613,621	+				-1.7
3,613,621	+				+0.3
3,613,622	-				+0.0
3,613,622	-				-0.4
3,613,622	-				-0.7
3,613,622	-				-0.8
3,613,622	-				-0.2
3,613,622	-				+0.6
3,613,622	-				-0.3
3,613,622	-				+0.8
3,613,622	-				-1.5
3,613,622	-				-1.4
3,613,622	-				+2.9
3,613,622	-				-0.9
3,613,622	-				-0.9
3,613,622	-				+0.3
3,613,622	-				+0.1
3,613,622	-				-0.9
3,613,622	-				-0.6
3,613,622	-				+0.5
3,613,622	-				+2.1
3,613,622	-				+1.7
3,613,622	-				-0.7
3,613,622	-				+0.0
3,613,622	-				+0.0
3,613,622	-				+0.0
3,613,622	-				+0.4
3,613,648	-				+0.2
3,613,749	+		Psest_3443	0.15	-1.2
3,613,749	+		Psest_3443	0.15	+0.3
3,613,750	-		Psest_3443	0.15	+0.5
3,613,750	-		Psest_3443	0.15	+0.1
3,613,750	-		Psest_3443	0.15	-0.9
3,613,750	-		Psest_3443	0.15	-1.1
3,613,915	-		Psest_3443	0.29	-0.2
3,613,915	-		Psest_3443	0.29	-1.6
3,613,971	+		Psest_3443	0.33	-2.7
3,613,972	-		Psest_3443	0.33	+1.3
3,614,046	+		Psest_3443	0.39	+2.1
3,614,097	+		Psest_3443	0.43	-0.2
3,614,097	+		Psest_3443	0.43	+0.5
3,614,097	+		Psest_3443	0.43	-0.5
3,614,097	+		Psest_3443	0.43	-0.1
3,614,097	+		Psest_3443	0.43	-0.1
3,614,098	-		Psest_3443	0.43	-0.8
3,614,098	-		Psest_3443	0.43	-0.9
3,614,098	-		Psest_3443	0.43	+0.4
3,614,098	-		Psest_3443	0.43	-0.0
3,614,179	-		Psest_3443	0.50	+0.1
3,614,179	-		Psest_3443	0.50	-0.5