Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3141

Experiment: nitrate 250 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrate 250 mM
3,314,755	-				-0.5
3,314,836	+				+0.3
3,314,836	+				+0.0
3,314,836	+				-3.5
3,314,836	+				-0.7
3,314,837	-				-1.1
3,314,837	-				+1.4
3,314,837	-				-2.7
3,314,839	-		Psest_3140	0.10	-1.9
3,314,839	-		Psest_3140	0.10	-0.7
3,314,883	+		Psest_3140	0.16	+0.9
3,314,917	+		Psest_3140	0.21	-1.0
3,314,917	+		Psest_3140	0.21	-1.2
3,314,917	+		Psest_3140	0.21	+2.1
3,314,917	+		Psest_3140	0.21	-0.1
3,314,917	+		Psest_3140	0.21	+0.4
3,314,918	-		Psest_3140	0.21	-1.7
3,314,918	-		Psest_3140	0.21	-2.5
3,314,918	-		Psest_3140	0.21	+0.7
3,314,918	-		Psest_3140	0.21	-2.0
3,314,918	-		Psest_3140	0.21	+0.4
3,314,918	-		Psest_3140	0.21	-1.0
3,314,935	+		Psest_3140	0.23	-2.5
3,315,037	+		Psest_3140	0.37	-1.0
3,315,037	+		Psest_3140	0.37	-1.1
3,315,038	-		Psest_3140	0.37	+0.4
3,315,058	+		Psest_3140	0.40	-0.6
3,315,059	-		Psest_3140	0.40	-0.4
3,315,059	-		Psest_3140	0.40	+0.1
3,315,059	-		Psest_3140	0.40	-1.0
3,315,059	-		Psest_3140	0.40	-0.7
3,315,059	-		Psest_3140	0.40	-0.1
3,315,216	+		Psest_3140	0.62	+0.7
3,315,217	-		Psest_3140	0.62	+0.4
3,315,350	-		Psest_3140	0.80	+0.0
3,315,369	+		Psest_3140	0.83	+0.7
3,315,369	+		Psest_3140	0.83	-0.1
3,315,370	-		Psest_3140	0.83	+0.4
3,315,370	-		Psest_3140	0.83	+0.1
3,315,452	-				+1.3
3,315,538	-				+1.1
3,315,607	-				+1.0
3,315,897	+		Psest_3141	0.53	-0.6
3,315,897	+		Psest_3141	0.53	-1.1
3,315,897	+		Psest_3141	0.53	-0.7
3,315,897	+		Psest_3141	0.53	+0.8
3,315,898	-		Psest_3141	0.53	+0.5
3,315,898	-		Psest_3141	0.53	+1.5
3,315,898	-		Psest_3141	0.53	+1.1
3,315,900	-		Psest_3141	0.53	+1.2
3,315,900	-		Psest_3141	0.53	+1.9
3,315,900	-		Psest_3141	0.53	+0.9
3,315,900	-		Psest_3141	0.53	+1.7
3,315,933	+		Psest_3141	0.59	-1.0
3,315,933	+		Psest_3141	0.59	+0.5
3,315,933	+		Psest_3141	0.59	+0.1
3,315,933	+		Psest_3141	0.59	-1.1
3,315,933	+		Psest_3141	0.59	-1.4
3,315,933	+		Psest_3141	0.59	-0.3
3,315,933	+		Psest_3141	0.59	+2.3
3,315,933	+		Psest_3141	0.59	-2.2
3,315,933	+		Psest_3141	0.59	-0.5
3,315,933	+		Psest_3141	0.59	+2.5
3,315,933	+		Psest_3141	0.59	+0.5
3,315,933	+		Psest_3141	0.59	-0.7
3,315,933	+		Psest_3141	0.59	+0.6
3,315,933	+		Psest_3141	0.59	+0.1
3,315,933	+		Psest_3141	0.59	+0.5
3,315,933	+		Psest_3141	0.59	-2.7
3,315,933	+		Psest_3141	0.59	-2.2
3,315,933	+		Psest_3141	0.59	+0.0
3,315,933	+		Psest_3141	0.59	-1.7
3,315,934	-		Psest_3141	0.59	+0.5
3,315,934	-		Psest_3141	0.59	-0.0
3,315,934	-		Psest_3141	0.59	+0.3
3,315,934	-		Psest_3141	0.59	+1.3
3,315,934	-		Psest_3141	0.59	+1.2
3,315,934	-		Psest_3141	0.59	+1.2
3,315,934	-		Psest_3141	0.59	+1.5
3,315,934	-		Psest_3141	0.59	+0.4
3,315,934	-		Psest_3141	0.59	+0.5
3,315,934	-		Psest_3141	0.59	-0.1
3,315,934	-		Psest_3141	0.59	+0.4
3,315,934	-		Psest_3141	0.59	+1.4
3,315,934	-		Psest_3141	0.59	-1.4
3,315,934	-		Psest_3141	0.59	+0.7
3,315,934	-		Psest_3141	0.59	+0.6
3,315,934	-		Psest_3141	0.59	-0.1
3,315,934	-		Psest_3141	0.59	+2.4
3,315,934	-		Psest_3141	0.59	+0.7
3,316,064	-		Psest_3141	0.82	-0.7
3,316,064	-		Psest_3141	0.82	-0.5
3,316,064	-		Psest_3141	0.82	-1.7
3,316,064	-		Psest_3141	0.82	-1.4
3,316,064	-		Psest_3141	0.82	+2.0
3,316,064	-		Psest_3141	0.82	+0.9
3,316,064	-		Psest_3141	0.82	+0.9
3,316,257	+				+0.9
3,316,257	+				+0.3
3,316,258	-				-2.0
3,316,287	+		Psest_3142	0.13	-0.5
3,316,453	+		Psest_3142	0.46	-0.8
3,316,453	+		Psest_3142	0.46	+1.9
3,316,453	+		Psest_3142	0.46	+0.7
3,316,453	+		Psest_3142	0.46	-0.3
3,316,453	+		Psest_3142	0.46	+0.9
3,316,453	+		Psest_3142	0.46	+0.7
3,316,453	+		Psest_3142	0.46	+0.0
3,316,454	-		Psest_3142	0.46	+1.2
3,316,454	-		Psest_3142	0.46	-0.9
3,316,454	-		Psest_3142	0.46	-0.1
3,316,454	-		Psest_3142	0.46	+0.2
3,316,482	+		Psest_3142	0.52	+0.8
3,316,482	+		Psest_3142	0.52	+0.4
3,316,483	-		Psest_3142	0.52	-0.6
3,316,483	-		Psest_3142	0.52	-0.3
3,316,483	-		Psest_3142	0.52	+1.1
3,316,486	+		Psest_3142	0.52	+0.4
3,316,486	+		Psest_3142	0.52	+0.6
3,316,486	+		Psest_3142	0.52	-1.2
3,316,486	+		Psest_3142	0.52	-0.9
3,316,486	+		Psest_3142	0.52	-2.1
3,316,486	+		Psest_3142	0.52	+0.3
3,316,486	+		Psest_3142	0.52	+0.9
3,316,486	+		Psest_3142	0.52	+0.2
3,316,486	+		Psest_3142	0.52	+0.8
3,316,486	+		Psest_3142	0.52	-0.1
3,316,486	+		Psest_3142	0.52	-0.0
3,316,486	+		Psest_3142	0.52	-0.1
3,316,486	+		Psest_3142	0.52	-0.1
3,316,487	-		Psest_3142	0.53	+0.0
3,316,487	-		Psest_3142	0.53	-0.8
3,316,487	-		Psest_3142	0.53	-1.4
3,316,487	-		Psest_3142	0.53	+0.2
3,316,487	-		Psest_3142	0.53	+1.0
3,316,487	-		Psest_3142	0.53	-0.1
3,316,487	-		Psest_3142	0.53	+0.9
3,316,487	-		Psest_3142	0.53	-1.1
3,316,679	+				+0.9
3,316,679	+				+0.4
3,316,680	-				+0.5
3,316,680	-				+0.8
3,316,811	+		Psest_3143	0.11	-1.0
3,316,812	-		Psest_3143	0.11	+0.0
3,316,812	-		Psest_3143	0.11	-1.3
3,316,812	-		Psest_3143	0.11	-0.9
3,316,858	-		Psest_3143	0.25	+0.5
3,316,906	+		Psest_3143	0.41	-0.8
3,316,907	-		Psest_3143	0.41	+2.1
3,316,936	-		Psest_3143	0.50	+0.4
3,316,978	+		Psest_3143	0.63	-1.9
3,317,011	+		Psest_3143	0.74	+0.2
3,317,159	+				-0.7