Experiment: nitrate 250 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2765 and Psest_2766 are separated by 162 nucleotides Psest_2766 and Psest_2767 are separated by 5 nucleotides Psest_2767 and Psest_2768 are separated by 88 nucleotides Psest_2768 and Psest_2769 are separated by 47 nucleotides
Psest_2765: Psest_2765 - Collagenase and related proteases, at 2,959,976 to 2,961,976
_2765
Psest_2766: Psest_2766 - hypothetical protein, at 2,962,139 to 2,962,735
_2766
Psest_2767: Psest_2767 - Uncharacterized conserved protein, at 2,962,741 to 2,963,472
_2767
Psest_2768: Psest_2768 - Kef-type K+ transport systems, predicted NAD-binding component, at 2,963,561 to 2,964,349
_2768
Psest_2769: Psest_2769 - hypothetical protein, at 2,964,397 to 2,964,834
_2769
Position (kb)
2962
2963
2964 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2961.882 kb on + strand at 2961.882 kb on + strand at 2961.883 kb on - strand at 2961.883 kb on - strand at 2961.883 kb on - strand at 2962.059 kb on + strand at 2962.419 kb on + strand, within Psest_2766 at 2962.886 kb on + strand, within Psest_2767 at 2962.898 kb on + strand, within Psest_2767 at 2962.898 kb on + strand, within Psest_2767 at 2962.898 kb on + strand, within Psest_2767 at 2962.898 kb on + strand, within Psest_2767 at 2962.899 kb on - strand, within Psest_2767 at 2962.899 kb on - strand, within Psest_2767 at 2962.902 kb on + strand, within Psest_2767 at 2962.902 kb on + strand, within Psest_2767 at 2962.902 kb on + strand, within Psest_2767 at 2962.902 kb on + strand, within Psest_2767 at 2962.902 kb on + strand, within Psest_2767 at 2962.902 kb on + strand, within Psest_2767 at 2962.902 kb on + strand, within Psest_2767 at 2962.902 kb on + strand, within Psest_2767 at 2962.902 kb on + strand, within Psest_2767 at 2962.902 kb on + strand, within Psest_2767 at 2962.902 kb on + strand, within Psest_2767 at 2962.902 kb on + strand, within Psest_2767 at 2962.902 kb on + strand, within Psest_2767 at 2962.902 kb on + strand, within Psest_2767 at 2962.902 kb on + strand, within Psest_2767 at 2962.903 kb on - strand, within Psest_2767 at 2962.903 kb on - strand, within Psest_2767 at 2962.903 kb on - strand, within Psest_2767 at 2962.903 kb on - strand, within Psest_2767 at 2963.260 kb on + strand, within Psest_2767 at 2963.260 kb on + strand, within Psest_2767 at 2963.261 kb on - strand, within Psest_2767 at 2963.261 kb on - strand, within Psest_2767 at 2963.261 kb on - strand, within Psest_2767 at 2963.592 kb on + strand at 2963.592 kb on + strand at 2963.592 kb on + strand at 2963.593 kb on - strand at 2963.593 kb on - strand at 2963.615 kb on + strand at 2963.615 kb on + strand at 2963.615 kb on + strand at 2963.615 kb on + strand at 2963.667 kb on + strand, within Psest_2768 at 2963.685 kb on - strand, within Psest_2768 at 2963.860 kb on - strand, within Psest_2768 at 2964.084 kb on - strand, within Psest_2768 at 2964.410 kb on + strand at 2964.449 kb on + strand, within Psest_2769 at 2964.449 kb on + strand, within Psest_2769 at 2964.449 kb on + strand, within Psest_2769 at 2964.450 kb on - strand, within Psest_2769
Per-strain Table
Position Strand Gene LocusTag Fraction nitrate 250 mM remove 2,961,882 + -0.8 2,961,882 + -1.2 2,961,883 - +1.0 2,961,883 - +1.9 2,961,883 - -1.2 2,962,059 + -1.0 2,962,419 + Psest_2766 0.47 -1.2 2,962,886 + Psest_2767 0.20 +0.1 2,962,898 + Psest_2767 0.21 +0.4 2,962,898 + Psest_2767 0.21 -1.8 2,962,898 + Psest_2767 0.21 -0.5 2,962,898 + Psest_2767 0.21 +1.3 2,962,899 - Psest_2767 0.22 +1.4 2,962,899 - Psest_2767 0.22 -0.0 2,962,902 + Psest_2767 0.22 +1.2 2,962,902 + Psest_2767 0.22 +2.3 2,962,902 + Psest_2767 0.22 +0.0 2,962,902 + Psest_2767 0.22 +0.3 2,962,902 + Psest_2767 0.22 -1.2 2,962,902 + Psest_2767 0.22 +0.4 2,962,902 + Psest_2767 0.22 +1.3 2,962,902 + Psest_2767 0.22 -0.2 2,962,902 + Psest_2767 0.22 -0.1 2,962,902 + Psest_2767 0.22 -0.5 2,962,902 + Psest_2767 0.22 +1.9 2,962,902 + Psest_2767 0.22 -1.3 2,962,902 + Psest_2767 0.22 +0.8 2,962,902 + Psest_2767 0.22 -0.9 2,962,902 + Psest_2767 0.22 +0.7 2,962,903 - Psest_2767 0.22 +0.1 2,962,903 - Psest_2767 0.22 -0.6 2,962,903 - Psest_2767 0.22 -1.5 2,962,903 - Psest_2767 0.22 +0.2 2,963,260 + Psest_2767 0.71 +0.5 2,963,260 + Psest_2767 0.71 -0.7 2,963,261 - Psest_2767 0.71 -0.5 2,963,261 - Psest_2767 0.71 +0.4 2,963,261 - Psest_2767 0.71 -0.2 2,963,592 + -0.9 2,963,592 + -0.9 2,963,592 + -0.7 2,963,593 - +0.3 2,963,593 - -0.1 2,963,615 + -0.2 2,963,615 + -1.5 2,963,615 + -0.0 2,963,615 + -1.4 2,963,667 + Psest_2768 0.13 -1.3 2,963,685 - Psest_2768 0.16 +3.3 2,963,860 - Psest_2768 0.38 -0.5 2,964,084 - Psest_2768 0.66 -1.0 2,964,410 + +1.4 2,964,449 + Psest_2769 0.12 -0.5 2,964,449 + Psest_2769 0.12 +0.4 2,964,449 + Psest_2769 0.12 -0.9 2,964,450 - Psest_2769 0.12 -0.5
Or see this region's nucleotide sequence