Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_2295

Experiment: nitrate 250 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrate 250 mM
2,446,179	+		Psest_2294	0.74	-3.3
2,446,179	+		Psest_2294	0.74	+2.0
2,446,180	-		Psest_2294	0.74	-3.0
2,446,322	+		Psest_2294	0.84	-0.4
2,446,322	+		Psest_2294	0.84	-2.8
2,446,322	+		Psest_2294	0.84	-2.5
2,446,323	-		Psest_2294	0.84	+0.2
2,446,323	-		Psest_2294	0.84	-0.3
2,446,323	-		Psest_2294	0.84	-1.4
2,446,323	-		Psest_2294	0.84	+0.9
2,446,359	-		Psest_2294	0.87	+0.9
2,446,359	-		Psest_2294	0.87	-0.6
2,446,392	+		Psest_2294	0.89	-1.1
2,446,392	+		Psest_2294	0.89	+1.6
2,446,393	-		Psest_2294	0.89	+1.4
2,446,424	+				+2.2
2,446,425	-				-0.1
2,446,425	-				-0.4
2,446,505	+				-1.9
2,446,505	+				-0.7
2,446,505	+				+0.2
2,446,526	-				-1.0
2,446,529	+				-1.4
2,446,529	+				-1.2
2,446,529	+				-1.3
2,446,529	+				-0.1
2,446,530	-				-0.0
2,446,530	-				-0.3
2,446,530	-				-1.0
2,446,530	-				-0.3
2,446,553	-				-1.1
2,446,564	+				-3.4
2,446,782	+				+0.5
2,446,808	+				-0.3
2,446,832	+				-0.0
2,446,845	-				-0.8
2,446,880	+				-0.8
2,446,881	-				-2.0
2,446,911	+				-1.9
2,446,934	+				-0.8
2,446,993	-				+0.2
2,447,017	-				-2.7
2,447,023	+				-1.0
2,447,023	+				-1.0
2,447,023	+				+0.4
2,447,024	-				-1.4
2,447,024	-				+0.2
2,447,024	-				+0.1
2,447,152	+				-3.3
2,447,152	+				-0.5
2,447,152	+				-0.7
2,447,153	-				-1.9
2,447,153	-				-1.0
2,447,153	-				+0.2
2,447,153	-				-0.6
2,447,295	+		Psest_2295	0.22	-1.5
2,447,295	+		Psest_2295	0.22	-2.0
2,447,295	+		Psest_2295	0.22	-1.6
2,447,295	+		Psest_2295	0.22	-0.4
2,447,296	-		Psest_2295	0.22	-0.9
2,447,296	-		Psest_2295	0.22	-1.0
2,447,296	-		Psest_2295	0.22	-0.1
2,447,298	-		Psest_2295	0.23	-1.4
2,447,298	-		Psest_2295	0.23	-0.5
2,447,298	-		Psest_2295	0.23	-3.3
2,447,298	-		Psest_2295	0.23	-1.4
2,447,298	-		Psest_2295	0.23	-2.8
2,447,424	+		Psest_2295	0.39	-1.0
2,447,433	+		Psest_2295	0.40	-0.6
2,447,435	+		Psest_2295	0.41	-2.5
2,447,435	+		Psest_2295	0.41	+1.4
2,447,435	+		Psest_2295	0.41	-0.1
2,447,436	-		Psest_2295	0.41	-0.7
2,447,659	+		Psest_2295	0.70	-0.5
2,447,660	-		Psest_2295	0.70	-1.4
2,447,660	-		Psest_2295	0.70	+0.3
2,447,660	-		Psest_2295	0.70	-0.4
2,447,660	-		Psest_2295	0.70	-0.4
2,447,660	-		Psest_2295	0.70	-0.9
2,447,660	-		Psest_2295	0.70	+0.2
2,447,660	-		Psest_2295	0.70	-0.0
2,447,660	-		Psest_2295	0.70	-0.2
2,447,660	-		Psest_2295	0.70	-1.3
2,447,660	-		Psest_2295	0.70	+0.0
2,447,664	-		Psest_2295	0.71	-2.1
2,447,724	-		Psest_2295	0.78	-1.4
2,447,724	-		Psest_2295	0.78	+1.8
2,447,724	-		Psest_2295	0.78	-1.2
2,447,724	-		Psest_2295	0.78	-2.3
2,447,775	+		Psest_2295	0.85	-1.0
2,447,897	-				-0.6
2,447,968	-		Psest_2296	0.10	+0.5
2,448,022	+		Psest_2296	0.18	-2.8
2,448,023	-		Psest_2296	0.18	-1.5
2,448,043	+		Psest_2296	0.21	+0.4
2,448,043	+		Psest_2296	0.21	-1.0
2,448,043	+		Psest_2296	0.21	-0.1
2,448,043	+		Psest_2296	0.21	-0.7
2,448,044	-		Psest_2296	0.21	-1.1
2,448,044	-		Psest_2296	0.21	-0.3
2,448,044	-		Psest_2296	0.21	+0.7
2,448,044	-		Psest_2296	0.21	-1.0
2,448,044	-		Psest_2296	0.21	-0.9
2,448,044	-		Psest_2296	0.21	+1.3
2,448,044	-		Psest_2296	0.21	-1.0
2,448,047	+		Psest_2296	0.21	-0.8
2,448,047	+		Psest_2296	0.21	-1.8
2,448,048	-		Psest_2296	0.21	-0.3
2,448,048	-		Psest_2296	0.21	+0.9
2,448,048	-		Psest_2296	0.21	-3.9
2,448,048	-		Psest_2296	0.21	-0.6
2,448,048	-		Psest_2296	0.21	+0.9
2,448,048	-		Psest_2296	0.21	-0.8
2,448,048	-		Psest_2296	0.21	+0.3
2,448,118	+		Psest_2296	0.31	-0.9
2,448,118	+		Psest_2296	0.31	+0.2
2,448,118	+		Psest_2296	0.31	-2.3
2,448,118	+		Psest_2296	0.31	-1.2
2,448,118	+		Psest_2296	0.31	-1.3
2,448,118	+		Psest_2296	0.31	+0.2
2,448,119	-		Psest_2296	0.31	-1.1
2,448,119	-		Psest_2296	0.31	-1.1
2,448,119	-		Psest_2296	0.31	+0.2
2,448,119	-		Psest_2296	0.31	-1.1
2,448,119	-		Psest_2296	0.31	-1.3
2,448,187	-		Psest_2296	0.41	-0.4
2,448,187	-		Psest_2296	0.41	-0.9
2,448,246	+		Psest_2296	0.49	+0.0
2,448,247	-		Psest_2296	0.49	-1.3
2,448,247	-		Psest_2296	0.49	-1.1
2,448,598	+				-0.2
2,448,598	+				+1.8
2,448,598	+				+1.2
2,448,598	+				-1.3
2,448,598	+				+0.4
2,448,599	-				+0.9
2,448,612	+				+1.3
2,448,612	+				-1.3
2,448,612	+				+0.2
2,448,612	+				-0.1
2,448,612	+				-1.0
2,448,612	+				-1.0
2,448,613	-				-1.1
2,448,664	+				+0.2
2,448,665	-				-0.8
2,448,671	+				+0.5
2,448,671	+				-0.6
2,448,671	+				+2.4
2,448,671	+				+3.1
2,448,671	+				+2.4
2,448,671	+				+0.8
2,448,671	+				+2.0
2,448,671	+				-1.0
2,448,672	-				-1.0
2,448,672	-				+0.1
2,448,672	-				+1.2
2,448,672	-				+0.1
2,448,672	-				+0.8
2,448,672	-				-1.0
2,448,672	-				+1.5
2,448,702	+				-0.0
2,448,705	+				+1.9
2,448,706	-				-1.8
2,448,711	+				-1.0
2,448,711	+				+1.3
2,448,712	-				+0.5
2,448,712	-				-1.4
2,448,715	+				+0.3
2,448,715	+				+0.7
2,448,715	+				+0.6
2,448,716	-				-1.7
2,448,716	-				-1.5
2,448,843	+				+0.2
2,448,843	+				+1.0
2,448,844	-				-1.8
2,448,844	-				-0.6
2,448,844	-				+0.6
2,448,844	-				+0.4
2,448,844	-				-0.2
2,448,858	+				-1.3
2,448,858	+				-2.0
2,448,859	-				+0.2
2,448,859	-				-0.8
2,448,869	-				+0.0
2,448,869	-				+1.2
2,448,869	-				-0.9