Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1441

Experiment: nitrate 250 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrate 250 mM
1,550,601	+		Psest_1440	0.30	-0.2
1,550,601	+		Psest_1440	0.30	+3.2
1,550,604	-		Psest_1440	0.31	-0.2
1,550,604	-		Psest_1440	0.31	-2.1
1,550,714	+		Psest_1440	0.44	-0.7
1,550,714	+		Psest_1440	0.44	+1.2
1,550,714	+		Psest_1440	0.44	-0.6
1,550,714	+		Psest_1440	0.44	-0.6
1,550,714	+		Psest_1440	0.44	+0.6
1,550,714	+		Psest_1440	0.44	+2.2
1,550,714	+		Psest_1440	0.44	-2.1
1,550,714	+		Psest_1440	0.44	+0.4
1,550,714	+		Psest_1440	0.44	-0.3
1,550,714	+		Psest_1440	0.44	+0.2
1,550,714	+		Psest_1440	0.44	-0.6
1,550,715	-		Psest_1440	0.44	-0.4
1,550,715	-		Psest_1440	0.44	+0.6
1,550,715	-		Psest_1440	0.44	+0.0
1,550,715	-		Psest_1440	0.44	-2.9
1,550,715	-		Psest_1440	0.44	+0.4
1,550,715	-		Psest_1440	0.44	-2.7
1,550,777	+		Psest_1440	0.52	+0.0
1,550,777	+		Psest_1440	0.52	-0.1
1,550,777	+		Psest_1440	0.52	-0.1
1,550,777	+		Psest_1440	0.52	+3.2
1,550,777	+		Psest_1440	0.52	+0.5
1,550,777	+		Psest_1440	0.52	+0.5
1,550,777	+		Psest_1440	0.52	+0.6
1,550,778	-		Psest_1440	0.52	-0.8
1,550,778	-		Psest_1440	0.52	-0.9
1,550,822	+		Psest_1440	0.57	-1.8
1,550,822	+		Psest_1440	0.57	-2.1
1,550,822	+		Psest_1440	0.57	-0.1
1,550,918	+		Psest_1440	0.69	-1.0
1,550,918	+		Psest_1440	0.69	-0.5
1,550,918	+		Psest_1440	0.69	+1.6
1,550,918	+		Psest_1440	0.69	+0.4
1,550,918	+		Psest_1440	0.69	+0.9
1,550,918	+		Psest_1440	0.69	+0.6
1,550,918	+		Psest_1440	0.69	+0.3
1,550,918	+		Psest_1440	0.69	+0.5
1,550,918	+		Psest_1440	0.69	-0.4
1,550,918	+		Psest_1440	0.69	-2.1
1,550,918	+		Psest_1440	0.69	+0.0
1,550,918	+		Psest_1440	0.69	+0.2
1,550,919	-		Psest_1440	0.69	-3.1
1,550,919	-		Psest_1440	0.69	-0.6
1,550,919	-		Psest_1440	0.69	-3.1
1,550,919	-		Psest_1440	0.69	-0.7
1,550,951	+		Psest_1440	0.73	-0.1
1,550,951	+		Psest_1440	0.73	-0.4
1,550,951	+		Psest_1440	0.73	-1.5
1,550,951	+		Psest_1440	0.73	-0.7
1,550,952	-		Psest_1440	0.73	-2.5
1,551,050	+		Psest_1440	0.85	-0.6
1,551,050	+		Psest_1440	0.85	-0.0
1,551,050	+		Psest_1440	0.85	-1.1
1,551,050	+		Psest_1440	0.85	-0.6
1,551,051	-		Psest_1440	0.86	-0.5
1,551,051	-		Psest_1440	0.86	-2.4
1,551,051	-		Psest_1440	0.86	-3.3
1,551,062	+		Psest_1440	0.87	-0.1
1,551,063	-		Psest_1440	0.87	-1.0
1,551,069	-		Psest_1440	0.88	-1.8
1,551,069	-		Psest_1440	0.88	+0.2
1,551,069	-		Psest_1440	0.88	+0.2
1,551,183	+				+2.2
1,551,205	+				+1.6
1,551,205	+				+0.9
1,551,205	+				+0.8
1,551,205	+				+0.7
1,551,205	+				-0.2
1,551,205	+				+3.8
1,551,205	+				+0.6
1,551,205	+				+0.0
1,551,205	+				+1.6
1,551,205	+				+1.7
1,551,205	+				+1.2
1,551,205	+				-0.1
1,551,205	+				-0.4
1,551,205	+				-0.1
1,551,206	-				-2.1
1,551,206	-				-1.9
1,551,537	+				-0.1
1,551,537	+				-0.3
1,551,537	+				+0.1
1,551,537	+				+0.0
1,551,538	-				+0.6
1,551,538	-				+0.4
1,551,585	+				+0.2
1,551,585	+				+0.8
1,551,585	+				-1.1
1,551,585	+				+1.4
1,551,585	+				+0.4
1,551,585	+				-0.4
1,551,586	-				+2.2
1,551,586	-				-1.6
1,551,586	-				+1.6
1,551,586	-				+2.4
1,551,586	-				+1.0
1,551,586	-				+1.9
1,551,653	+				-0.4
1,551,653	+				+1.6
1,551,653	+				+0.4
1,551,654	-				-0.2
1,551,654	-				+1.1
1,551,771	+		Psest_1441	0.18	+0.2
1,551,771	+		Psest_1441	0.18	+0.1
1,551,771	+		Psest_1441	0.18	-1.8
1,551,772	-		Psest_1441	0.18	-0.7
1,551,894	+		Psest_1441	0.28	+1.6
1,551,894	+		Psest_1441	0.28	-0.1
1,551,894	+		Psest_1441	0.28	+1.1
1,551,894	+		Psest_1441	0.28	+1.9
1,552,104	+		Psest_1441	0.44	+1.2
1,552,104	+		Psest_1441	0.44	+2.5
1,552,104	+		Psest_1441	0.44	-1.2
1,552,104	+		Psest_1441	0.44	-1.0
1,552,105	-		Psest_1441	0.44	-0.7
1,552,105	-		Psest_1441	0.44	-0.9
1,552,105	-		Psest_1441	0.44	+0.8
1,552,105	-		Psest_1441	0.44	-0.9
1,552,125	+		Psest_1441	0.46	+0.5
1,552,125	+		Psest_1441	0.46	+1.0
1,552,125	+		Psest_1441	0.46	-0.4
1,552,125	+		Psest_1441	0.46	+2.0
1,552,125	+		Psest_1441	0.46	+1.2
1,552,125	+		Psest_1441	0.46	+1.7
1,552,125	+		Psest_1441	0.46	+0.6
1,552,125	+		Psest_1441	0.46	-1.1
1,552,125	+		Psest_1441	0.46	+0.1
1,552,125	+		Psest_1441	0.46	-0.9
1,552,126	-		Psest_1441	0.46	+0.4
1,552,126	-		Psest_1441	0.46	-0.2
1,552,126	-		Psest_1441	0.46	-0.6
1,552,126	-		Psest_1441	0.46	+0.8
1,552,126	-		Psest_1441	0.46	+1.2
1,552,344	+		Psest_1441	0.63	+0.3
1,552,371	+		Psest_1441	0.65	-0.1
1,552,371	+		Psest_1441	0.65	+0.6
1,552,371	+		Psest_1441	0.65	-0.6
1,552,372	-		Psest_1441	0.65	-0.2
1,552,372	-		Psest_1441	0.65	-0.3
1,552,482	+		Psest_1441	0.74	-2.2
1,552,482	+		Psest_1441	0.74	+0.1
1,552,482	+		Psest_1441	0.74	+2.5
1,552,482	+		Psest_1441	0.74	-2.2
1,552,482	+		Psest_1441	0.74	+0.4
1,552,482	+		Psest_1441	0.74	+0.8
1,552,482	+		Psest_1441	0.74	+0.6
1,552,482	+		Psest_1441	0.74	+0.5
1,552,483	-		Psest_1441	0.74	-1.1
1,552,483	-		Psest_1441	0.74	-0.2
1,552,483	-		Psest_1441	0.74	-1.6
1,552,499	+		Psest_1441	0.75	+0.4
1,552,799	+				+0.8
1,552,800	-				+1.6
1,552,800	-				-1.4
1,552,845	+				-0.1
1,552,845	+				+0.1
1,552,845	+				-0.2
1,552,845	+				-0.2
1,552,846	-				+0.9
1,552,846	-				+0.1
1,552,846	-				-1.1
1,552,846	-				-0.8
1,552,846	-				-0.6
1,552,846	-				-0.4
1,552,846	-				-0.7
1,552,849	+				+1.0
1,552,849	+				-0.5
1,552,849	+				+0.5
1,552,857	+				-0.1
1,553,120	+		Psest_1442	0.50	-0.8
1,553,120	+		Psest_1442	0.50	+0.1
1,553,120	+		Psest_1442	0.50	+0.8
1,553,120	+		Psest_1442	0.50	+0.3
1,553,120	+		Psest_1442	0.50	-0.1
1,553,120	+		Psest_1442	0.50	+1.7
1,553,120	+		Psest_1442	0.50	+0.0
1,553,120	+		Psest_1442	0.50	-0.1
1,553,120	+		Psest_1442	0.50	+0.2
1,553,120	+		Psest_1442	0.50	+0.9
1,553,120	+		Psest_1442	0.50	+1.0
1,553,120	+		Psest_1442	0.50	-0.8
1,553,120	+		Psest_1442	0.50	+0.2
1,553,120	+		Psest_1442	0.50	+0.9
1,553,120	+		Psest_1442	0.50	-1.2
1,553,120	+		Psest_1442	0.50	-0.9
1,553,120	+		Psest_1442	0.50	-0.5
1,553,120	+		Psest_1442	0.50	-0.6
1,553,120	+		Psest_1442	0.50	-1.0
1,553,120	+		Psest_1442	0.50	-0.4
1,553,120	+		Psest_1442	0.50	-0.0
1,553,120	+		Psest_1442	0.50	+0.2
1,553,120	+		Psest_1442	0.50	+1.6
1,553,120	+		Psest_1442	0.50	+1.4
1,553,120	+		Psest_1442	0.50	+0.5
1,553,120	+		Psest_1442	0.50	-0.1
1,553,120	+		Psest_1442	0.50	-0.9
1,553,120	+		Psest_1442	0.50	-1.1
1,553,120	+		Psest_1442	0.50	-0.1
1,553,120	+		Psest_1442	0.50	-0.1
1,553,120	+		Psest_1442	0.50	+1.7
1,553,120	+		Psest_1442	0.50	+0.9
1,553,120	+		Psest_1442	0.50	-0.0
1,553,120	+		Psest_1442	0.50	+0.0
1,553,120	+		Psest_1442	0.50	+0.2
1,553,120	+		Psest_1442	0.50	-1.8
1,553,120	+		Psest_1442	0.50	-0.4
1,553,120	+		Psest_1442	0.50	+0.4
1,553,121	-		Psest_1442	0.50	-0.2
1,553,121	-		Psest_1442	0.50	+1.6
1,553,121	-		Psest_1442	0.50	+2.2
1,553,121	-		Psest_1442	0.50	-2.2
1,553,121	-		Psest_1442	0.50	+3.6
1,553,121	-		Psest_1442	0.50	-0.9
1,553,121	-		Psest_1442	0.50	+1.3
1,553,121	-		Psest_1442	0.50	+0.7
1,553,121	-		Psest_1442	0.50	+0.6
1,553,121	-		Psest_1442	0.50	+2.2
1,553,121	-		Psest_1442	0.50	+0.2
1,553,121	-		Psest_1442	0.50	-0.5
1,553,121	-		Psest_1442	0.50	+1.1
1,553,121	-		Psest_1442	0.50	+0.2
1,553,121	-		Psest_1442	0.50	-0.9
1,553,121	-		Psest_1442	0.50	-1.5
1,553,121	-		Psest_1442	0.50	+0.9
1,553,121	-		Psest_1442	0.50	-0.5
1,553,121	-		Psest_1442	0.50	+1.8
1,553,121	-		Psest_1442	0.50	+1.0
1,553,121	-		Psest_1442	0.50	+0.4
1,553,121	-		Psest_1442	0.50	+0.2
1,553,245	+		Psest_1442	0.75	+0.6
1,553,245	+		Psest_1442	0.75	+0.9
1,553,245	+		Psest_1442	0.75	+0.6
1,553,246	-		Psest_1442	0.76	-0.4
1,553,246	-		Psest_1442	0.76	+0.1
1,553,246	-		Psest_1442	0.76	+0.6
1,553,297	+		Psest_1442	0.86	+0.2
1,553,319	+				-0.3
1,553,342	+				+0.6
1,553,342	+				+0.6
1,553,343	-				-1.1
1,553,343	-				+0.2
1,553,343	-				-0.6
1,553,383	+				+0.6
1,553,401	+				+1.1
1,553,401	+				+0.0
1,553,401	+				+0.2
1,553,401	+				-0.8
1,553,401	+				-0.0
1,553,401	+				-1.5
1,553,401	+				+4.2
1,553,401	+				+0.6
1,553,401	+				-1.2
1,553,401	+				+0.9
1,553,402	-				-1.4
1,553,402	-				+0.3
1,553,402	-				-0.2
1,553,402	-				-1.7
1,553,402	-				+1.6
1,553,402	-				-0.4
1,553,402	-				-1.2
1,553,402	-				+0.1
1,553,402	-				-0.3
1,553,618	-				+0.0
1,553,618	-				+0.9
1,553,618	-				-0.6
1,553,803	+		Psest_1443	0.25	-0.8
1,553,803	+		Psest_1443	0.25	+0.7
1,553,804	-		Psest_1443	0.25	+2.5
1,553,804	-		Psest_1443	0.25	+1.2