Strain Fitness in Shewanella amazonensis SB2B around Sama_1244

Experiment: Adenosine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Adenosine (N)
1,527,125	+		Sama_1242	0.72	-0.6
1,527,125	+		Sama_1242	0.72	-0.7
1,527,128	+		Sama_1242	0.73	-1.9
1,527,128	+		Sama_1242	0.73	+0.0
1,527,139	+		Sama_1242	0.73	-0.2
1,527,140	-		Sama_1242	0.74	-0.2
1,527,196	+		Sama_1242	0.78	+0.2
1,527,197	-		Sama_1242	0.78	-0.4
1,527,211	+		Sama_1242	0.80	-2.4
1,527,273	+		Sama_1242	0.85	-1.3
1,527,274	-		Sama_1242	0.85	-0.4
1,527,332	+		Sama_1242	0.90	+0.0
1,527,332	+		Sama_1242	0.90	-1.1
1,527,332	+		Sama_1242	0.90	+1.2
1,527,332	+		Sama_1242	0.90	-0.5
1,527,332	+		Sama_1242	0.90	-0.1
1,527,333	-		Sama_1242	0.90	-1.0
1,527,333	-		Sama_1242	0.90	-0.1
1,527,333	-		Sama_1242	0.90	-0.5
1,527,333	-		Sama_1242	0.90	+0.5
1,527,333	-		Sama_1242	0.90	+0.5
1,527,333	-		Sama_1242	0.90	-1.4
1,527,333	-		Sama_1242	0.90	-0.1
1,527,333	-		Sama_1242	0.90	-1.2
1,527,370	+				-2.0
1,527,370	+				-0.2
1,527,370	+				-1.2
1,527,371	-				-0.7
1,527,371	-				-1.8
1,527,470	-				-0.7
1,527,470	-				-1.0
1,527,478	+				+3.3
1,527,478	+				+0.3
1,527,482	+				-1.1
1,527,482	+				-0.6
1,527,483	-				+0.9
1,527,483	-				+1.4
1,527,483	-				+0.1
1,527,488	+				+1.7
1,527,488	+				+0.2
1,527,488	+				-0.5
1,527,489	-				+1.3
1,527,524	+				+0.2
1,527,547	+				+1.0
1,527,547	+				-1.5
1,527,558	+				-0.6
1,527,558	+				+2.1
1,527,558	+				-0.8
1,527,558	+				-0.6
1,527,559	-				-2.6
1,527,559	-				-2.1
1,527,671	-		Sama_1243	0.39	-0.4
1,527,747	+		Sama_1243	0.64	-0.5
1,527,748	-		Sama_1243	0.64	-0.3
1,527,748	-		Sama_1243	0.64	+0.9
1,527,768	-		Sama_1243	0.71	-2.1
1,527,768	-		Sama_1243	0.71	-0.4
1,527,844	+				-1.9
1,527,844	+				+0.0
1,527,857	+				-1.4
1,527,858	-				-0.7
1,527,893	+				+0.9
1,527,894	-				-0.6
1,527,897	+				+0.5
1,527,898	-				+0.4
1,528,119	+				-0.4
1,528,196	+		Sama_1244	0.27	-1.4
1,528,227	+		Sama_1244	0.38	+0.5
1,528,242	+		Sama_1244	0.44	+0.4
1,528,242	+		Sama_1244	0.44	-1.2
1,528,267	-		Sama_1244	0.52	-1.4
1,528,291	+		Sama_1244	0.61	-2.3
1,528,292	-		Sama_1244	0.61	-0.9
1,528,294	+		Sama_1244	0.62	-0.0
1,528,294	+		Sama_1244	0.62	-0.6
1,528,294	+		Sama_1244	0.62	-2.0
1,528,295	-		Sama_1244	0.62	+0.3
1,528,295	-		Sama_1244	0.62	-0.5
1,528,314	+		Sama_1244	0.69	-0.8
1,528,377	+				+0.1
1,528,378	-				+2.6
1,528,378	-				-0.4
1,528,378	-				+1.7
1,528,380	+				-0.7
1,528,380	+				-0.4
1,528,380	+				+0.7
1,528,381	-				+0.7
1,528,402	+				-0.1
1,528,402	+				+1.9
1,528,402	+				-1.1
1,528,402	+				-1.6
1,528,402	+				+1.7
1,528,402	+				+1.0
1,528,403	-				-2.9
1,528,403	-				-0.2
1,528,403	-				-0.3
1,528,403	-				-1.2
1,528,403	-				+3.6
1,528,403	-				-0.3
1,528,403	-				+0.7
1,528,417	+				+0.2
1,528,437	+				-0.5
1,528,438	-				-0.2
1,528,438	-				-0.1
1,528,458	+				-0.5
1,528,458	+				-2.3
1,528,486	-				-2.6
1,528,501	+				-0.1
1,528,589	+		Sama_1245	0.19	+1.0
1,528,595	+		Sama_1245	0.19	+0.1
1,528,595	+		Sama_1245	0.19	-0.1
1,528,595	+		Sama_1245	0.19	-0.0
1,528,596	-		Sama_1245	0.20	+0.6
1,528,598	+		Sama_1245	0.20	-0.5
1,528,599	-		Sama_1245	0.20	+0.1
1,528,645	+		Sama_1245	0.25	-2.1
1,528,645	+		Sama_1245	0.25	-0.0
1,528,645	+		Sama_1245	0.25	-1.1
1,528,646	-		Sama_1245	0.25	-2.3
1,528,646	-		Sama_1245	0.25	-1.3
1,528,681	+		Sama_1245	0.29	+0.9
1,528,681	+		Sama_1245	0.29	-1.0
1,528,681	+		Sama_1245	0.29	-0.1
1,528,682	-		Sama_1245	0.29	-0.6
1,528,689	+		Sama_1245	0.30	-0.7
1,528,712	-		Sama_1245	0.32	+2.0
1,528,800	+		Sama_1245	0.42	-0.7
1,528,800	+		Sama_1245	0.42	-0.3
1,528,800	+		Sama_1245	0.42	-0.7
1,528,800	+		Sama_1245	0.42	-1.4
1,528,800	+		Sama_1245	0.42	-0.1
1,528,800	+		Sama_1245	0.42	-0.0
1,528,800	+		Sama_1245	0.42	-1.4
1,528,801	-		Sama_1245	0.42	+1.6
1,528,801	-		Sama_1245	0.42	-0.7
1,528,801	-		Sama_1245	0.42	+0.3
1,528,811	+		Sama_1245	0.43	-0.7
1,528,857	+		Sama_1245	0.48	-0.9
1,528,857	+		Sama_1245	0.48	+1.2
1,528,858	-		Sama_1245	0.48	-0.3
1,528,858	-		Sama_1245	0.48	-0.1
1,528,858	-		Sama_1245	0.48	-1.4
1,528,923	+		Sama_1245	0.55	-0.7
1,528,924	-		Sama_1245	0.55	-1.3
1,528,924	-		Sama_1245	0.55	+0.3
1,528,978	+		Sama_1245	0.61	-0.5
1,528,978	+		Sama_1245	0.61	-0.5
1,528,979	-		Sama_1245	0.61	+0.4
1,529,142	+		Sama_1245	0.79	-0.1
1,529,142	+		Sama_1245	0.79	+0.1
1,529,142	+		Sama_1245	0.79	-0.8
1,529,142	+		Sama_1245	0.79	-0.6
1,529,143	-		Sama_1245	0.79	-0.9
1,529,143	-		Sama_1245	0.79	-1.9
1,529,143	-		Sama_1245	0.79	-0.3
1,529,143	-		Sama_1245	0.79	+0.0
1,529,143	-		Sama_1245	0.79	-1.1
1,529,143	-		Sama_1245	0.79	+0.1
1,529,143	-		Sama_1245	0.79	-0.6
1,529,143	-		Sama_1245	0.79	+0.1
1,529,146	+		Sama_1245	0.80	+0.6
1,529,147	-		Sama_1245	0.80	-0.7
1,529,147	-		Sama_1245	0.80	-0.5
1,529,168	+		Sama_1245	0.82	+0.1
1,529,169	-		Sama_1245	0.82	+0.3
1,529,169	-		Sama_1245	0.82	-0.8
1,529,169	-		Sama_1245	0.82	-0.7
1,529,171	+		Sama_1245	0.82	-0.1
1,529,171	+		Sama_1245	0.82	-0.2
1,529,171	+		Sama_1245	0.82	+0.6
1,529,172	-		Sama_1245	0.82	-1.2
1,529,227	+		Sama_1245	0.88	-1.4
1,529,227	+		Sama_1245	0.88	+0.5
1,529,228	-		Sama_1245	0.88	-0.2
1,529,228	-		Sama_1245	0.88	+0.1
1,529,228	-		Sama_1245	0.88	-2.2
1,529,257	+				-1.4
1,529,257	+				+0.9
1,529,257	+				-0.6
1,529,257	+				-0.2
1,529,258	-				+1.0
1,529,305	+				-1.2
1,529,305	+				-0.6
1,529,306	-				-0.6
1,529,317	+				-1.1
1,529,318	-				+2.4
1,529,318	-				+0.9
1,529,361	+				-1.8
1,529,402	+				+1.3
1,529,402	+				-0.3