Experiment: Adenosine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Sama_1182 and Sama_1183 overlap by 1 nucleotides Sama_1183 and Sama_1184 overlap by 4 nucleotides Sama_1184 and Sama_1185 overlap by 4 nucleotides
Sama_1182: Sama_1182 - 3-oxoacyl-(acyl carrier protein) synthase III (RefSeq), at 1,445,417 to 1,446,466
_1182
Sama_1183: Sama_1183 - alpha/beta fold family hydrolase (RefSeq), at 1,446,466 to 1,447,398
_1183
Sama_1184: Sama_1184 - peptide synthase (RefSeq), at 1,447,395 to 1,449,089
_1184
Sama_1185: Sama_1185 - steroid dehydrogenase (RefSeq), at 1,449,086 to 1,450,141
_1185
Position (kb)
1447
1448
1449
1450 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4 at 1446.424 kb on - strand at 1446.424 kb on - strand at 1446.471 kb on + strand at 1446.471 kb on + strand at 1446.472 kb on - strand at 1446.477 kb on + strand at 1446.535 kb on - strand at 1446.537 kb on + strand at 1446.626 kb on - strand, within Sama_1183 at 1446.662 kb on - strand, within Sama_1183 at 1446.686 kb on + strand, within Sama_1183 at 1446.686 kb on + strand, within Sama_1183 at 1446.686 kb on + strand, within Sama_1183 at 1446.686 kb on + strand, within Sama_1183 at 1446.686 kb on + strand, within Sama_1183 at 1446.687 kb on - strand, within Sama_1183 at 1446.687 kb on - strand, within Sama_1183 at 1446.730 kb on + strand, within Sama_1183 at 1446.731 kb on - strand, within Sama_1183 at 1446.731 kb on - strand, within Sama_1183 at 1446.750 kb on - strand, within Sama_1183 at 1446.853 kb on + strand, within Sama_1183 at 1446.936 kb on + strand, within Sama_1183 at 1446.936 kb on + strand, within Sama_1183 at 1447.033 kb on - strand, within Sama_1183 at 1447.033 kb on - strand, within Sama_1183 at 1447.090 kb on - strand, within Sama_1183 at 1447.090 kb on - strand, within Sama_1183 at 1447.116 kb on + strand, within Sama_1183 at 1447.253 kb on + strand, within Sama_1183 at 1447.253 kb on + strand, within Sama_1183 at 1447.309 kb on + strand at 1447.309 kb on + strand at 1447.309 kb on + strand at 1447.309 kb on + strand at 1447.582 kb on + strand, within Sama_1184 at 1447.582 kb on + strand, within Sama_1184 at 1447.583 kb on - strand, within Sama_1184 at 1447.583 kb on - strand, within Sama_1184 at 1447.613 kb on + strand, within Sama_1184 at 1447.752 kb on - strand, within Sama_1184 at 1447.859 kb on + strand, within Sama_1184 at 1448.034 kb on + strand, within Sama_1184 at 1448.035 kb on - strand, within Sama_1184 at 1448.126 kb on + strand, within Sama_1184 at 1448.127 kb on - strand, within Sama_1184 at 1448.188 kb on - strand, within Sama_1184 at 1448.285 kb on + strand, within Sama_1184 at 1448.286 kb on - strand, within Sama_1184 at 1448.338 kb on + strand, within Sama_1184 at 1448.339 kb on - strand, within Sama_1184 at 1448.370 kb on + strand, within Sama_1184 at 1448.468 kb on + strand, within Sama_1184 at 1448.543 kb on + strand, within Sama_1184 at 1448.557 kb on - strand, within Sama_1184 at 1448.572 kb on + strand, within Sama_1184 at 1448.604 kb on + strand, within Sama_1184 at 1448.605 kb on - strand, within Sama_1184 at 1448.607 kb on + strand, within Sama_1184 at 1448.607 kb on + strand, within Sama_1184 at 1448.686 kb on - strand, within Sama_1184 at 1448.772 kb on + strand, within Sama_1184 at 1448.872 kb on + strand, within Sama_1184 at 1448.872 kb on + strand, within Sama_1184 at 1448.873 kb on - strand, within Sama_1184 at 1449.139 kb on + strand at 1449.139 kb on + strand at 1449.301 kb on + strand, within Sama_1185 at 1449.301 kb on + strand, within Sama_1185 at 1449.301 kb on + strand, within Sama_1185 at 1449.311 kb on - strand, within Sama_1185 at 1449.395 kb on + strand, within Sama_1185 at 1449.395 kb on + strand, within Sama_1185 at 1449.395 kb on + strand, within Sama_1185 at 1449.396 kb on - strand, within Sama_1185 at 1449.411 kb on + strand, within Sama_1185 at 1449.470 kb on + strand, within Sama_1185 at 1449.470 kb on + strand, within Sama_1185 at 1449.471 kb on - strand, within Sama_1185 at 1449.478 kb on + strand, within Sama_1185 at 1449.536 kb on + strand, within Sama_1185 at 1449.560 kb on + strand, within Sama_1185 at 1449.560 kb on + strand, within Sama_1185 at 1449.560 kb on + strand, within Sama_1185 at 1449.646 kb on + strand, within Sama_1185 at 1449.646 kb on + strand, within Sama_1185 at 1449.646 kb on + strand, within Sama_1185 at 1449.646 kb on + strand, within Sama_1185 at 1449.646 kb on + strand, within Sama_1185 at 1449.745 kb on + strand, within Sama_1185 at 1449.753 kb on - strand, within Sama_1185 at 1449.753 kb on - strand, within Sama_1185 at 1449.941 kb on + strand, within Sama_1185 at 1449.941 kb on + strand, within Sama_1185 at 1449.942 kb on - strand, within Sama_1185 at 1449.971 kb on + strand, within Sama_1185 at 1449.971 kb on + strand, within Sama_1185 at 1449.971 kb on + strand, within Sama_1185 at 1449.972 kb on - strand, within Sama_1185 at 1449.972 kb on - strand, within Sama_1185 at 1449.973 kb on + strand, within Sama_1185 at 1450.046 kb on + strand at 1450.046 kb on + strand at 1450.074 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Adenosine (N) remove 1,446,424 - -0.7 1,446,424 - -1.0 1,446,471 + +3.5 1,446,471 + +1.0 1,446,472 - +1.1 1,446,477 + +0.8 1,446,535 - +0.2 1,446,537 + +1.0 1,446,626 - Sama_1183 0.17 -2.4 1,446,662 - Sama_1183 0.21 +0.6 1,446,686 + Sama_1183 0.24 -0.6 1,446,686 + Sama_1183 0.24 +1.2 1,446,686 + Sama_1183 0.24 +0.3 1,446,686 + Sama_1183 0.24 +1.3 1,446,686 + Sama_1183 0.24 +0.5 1,446,687 - Sama_1183 0.24 +0.2 1,446,687 - Sama_1183 0.24 +1.0 1,446,730 + Sama_1183 0.28 -0.7 1,446,731 - Sama_1183 0.28 +0.6 1,446,731 - Sama_1183 0.28 +0.6 1,446,750 - Sama_1183 0.30 +0.8 1,446,853 + Sama_1183 0.41 -0.8 1,446,936 + Sama_1183 0.50 -0.9 1,446,936 + Sama_1183 0.50 -0.8 1,447,033 - Sama_1183 0.61 -0.4 1,447,033 - Sama_1183 0.61 +0.6 1,447,090 - Sama_1183 0.67 -2.6 1,447,090 - Sama_1183 0.67 -1.3 1,447,116 + Sama_1183 0.70 +0.3 1,447,253 + Sama_1183 0.84 -0.3 1,447,253 + Sama_1183 0.84 -0.8 1,447,309 + +0.7 1,447,309 + +2.4 1,447,309 + -0.4 1,447,309 + +0.4 1,447,582 + Sama_1184 0.11 +0.7 1,447,582 + Sama_1184 0.11 -0.4 1,447,583 - Sama_1184 0.11 +0.8 1,447,583 - Sama_1184 0.11 +0.6 1,447,613 + Sama_1184 0.13 -0.9 1,447,752 - Sama_1184 0.21 -0.6 1,447,859 + Sama_1184 0.27 +0.2 1,448,034 + Sama_1184 0.38 +0.2 1,448,035 - Sama_1184 0.38 -0.0 1,448,126 + Sama_1184 0.43 -1.4 1,448,127 - Sama_1184 0.43 +0.2 1,448,188 - Sama_1184 0.47 -0.2 1,448,285 + Sama_1184 0.53 -0.5 1,448,286 - Sama_1184 0.53 -0.5 1,448,338 + Sama_1184 0.56 +0.3 1,448,339 - Sama_1184 0.56 -2.2 1,448,370 + Sama_1184 0.58 -0.4 1,448,468 + Sama_1184 0.63 +0.1 1,448,543 + Sama_1184 0.68 +2.4 1,448,557 - Sama_1184 0.69 -1.1 1,448,572 + Sama_1184 0.69 -1.4 1,448,604 + Sama_1184 0.71 +0.0 1,448,605 - Sama_1184 0.71 -0.9 1,448,607 + Sama_1184 0.72 -1.2 1,448,607 + Sama_1184 0.72 -1.2 1,448,686 - Sama_1184 0.76 +0.5 1,448,772 + Sama_1184 0.81 -2.6 1,448,872 + Sama_1184 0.87 -1.5 1,448,872 + Sama_1184 0.87 +0.9 1,448,873 - Sama_1184 0.87 +1.6 1,449,139 + -0.8 1,449,139 + +0.1 1,449,301 + Sama_1185 0.20 -0.9 1,449,301 + Sama_1185 0.20 +0.6 1,449,301 + Sama_1185 0.20 +0.5 1,449,311 - Sama_1185 0.21 +0.5 1,449,395 + Sama_1185 0.29 +1.0 1,449,395 + Sama_1185 0.29 -0.3 1,449,395 + Sama_1185 0.29 +1.2 1,449,396 - Sama_1185 0.29 +3.1 1,449,411 + Sama_1185 0.31 -0.8 1,449,470 + Sama_1185 0.36 -0.4 1,449,470 + Sama_1185 0.36 +1.1 1,449,471 - Sama_1185 0.36 -0.8 1,449,478 + Sama_1185 0.37 -0.8 1,449,536 + Sama_1185 0.43 +0.4 1,449,560 + Sama_1185 0.45 -2.2 1,449,560 + Sama_1185 0.45 -0.7 1,449,560 + Sama_1185 0.45 -0.8 1,449,646 + Sama_1185 0.53 -0.7 1,449,646 + Sama_1185 0.53 +1.5 1,449,646 + Sama_1185 0.53 -0.9 1,449,646 + Sama_1185 0.53 -0.7 1,449,646 + Sama_1185 0.53 -0.4 1,449,745 + Sama_1185 0.62 +0.2 1,449,753 - Sama_1185 0.63 +1.2 1,449,753 - Sama_1185 0.63 +4.1 1,449,941 + Sama_1185 0.81 +2.6 1,449,941 + Sama_1185 0.81 -0.6 1,449,942 - Sama_1185 0.81 -1.0 1,449,971 + Sama_1185 0.84 +0.4 1,449,971 + Sama_1185 0.84 -0.1 1,449,971 + Sama_1185 0.84 -0.9 1,449,972 - Sama_1185 0.84 +0.5 1,449,972 - Sama_1185 0.84 +0.2 1,449,973 + Sama_1185 0.84 -0.6 1,450,046 + -0.3 1,450,046 + +0.1 1,450,074 + +0.4
Or see this region's nucleotide sequence