Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_1995

Experiment: succinate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	succinate (C)
2,112,666	+				-0.6
2,112,679	+				-0.3
2,112,696	+				-0.8
2,112,736	-				+0.3
2,112,770	-				+0.5
2,112,770	-				+0.1
2,112,843	+				+1.7
2,112,843	+				-1.4
2,112,843	+				+0.1
2,112,957	+				-0.9
2,112,988	+				-0.8
2,113,005	-				-0.2
2,113,009	+				-1.5
2,113,017	-				-0.5
2,113,049	+				-0.4
2,113,059	+				-1.1
2,113,070	+				+0.9
2,113,070	+				+0.1
2,113,078	-				+0.2
2,113,080	+				-1.5
2,113,088	-				+1.0
2,113,088	-				+0.5
2,113,093	+				-1.0
2,113,122	+				-0.5
2,113,143	+				+0.2
2,113,145	+				-1.0
2,113,153	-				-0.1
2,113,166	+				+0.0
2,113,167	+				-2.5
2,113,168	+				+0.2
2,113,175	-				-1.9
2,113,176	+				+0.2
2,113,176	+				-0.7
2,113,176	+				-0.8
2,113,176	+				-0.1
2,113,176	+				-1.7
2,113,176	+				-0.7
2,113,176	+				-0.5
2,113,176	+				-0.1
2,113,176	+				+1.3
2,113,176	+				-0.7
2,113,176	+				-2.3
2,113,176	+				+0.6
2,113,176	+				-0.5
2,113,176	+				-0.3
2,113,176	+				+0.4
2,113,176	+				+0.3
2,113,176	+				-0.4
2,113,176	+				-1.6
2,113,176	+				+0.7
2,113,176	+				-0.1
2,113,176	+				-1.0
2,113,176	+				-0.7
2,113,176	+				+0.1
2,113,176	+				+0.1
2,113,176	+				+0.4
2,113,176	+				-0.5
2,113,176	+				-0.4
2,113,176	+				+0.1
2,113,176	+				-1.4
2,113,176	+				-0.8
2,113,176	+				+1.3
2,113,184	+				-1.5
2,113,184	-				+1.1
2,113,184	-				+0.7
2,113,184	-				+0.4
2,113,184	-				-0.1
2,113,184	-				-0.1
2,113,184	-				-0.6
2,113,184	-				-1.1
2,113,184	-				-0.3
2,113,184	-				-0.9
2,113,184	-				+0.6
2,113,184	-				+0.7
2,113,184	-				+0.3
2,113,184	-				-0.4
2,113,184	-				-1.8
2,113,184	-				+0.5
2,113,184	-				+0.8
2,113,184	-				-1.8
2,113,184	-				+0.6
2,113,184	-				+0.0
2,113,184	-				-0.5
2,113,184	-				+0.2
2,113,184	-				-3.3
2,113,184	-				-0.2
2,113,184	-				+0.0
2,113,184	-				+0.6
2,113,184	-				+0.0
2,113,184	-				-0.1
2,113,184	-				-1.8
2,113,184	-				+0.1
2,113,184	-				+0.5
2,113,184	-				-2.2
2,113,184	-				-0.7
2,113,184	-				+0.3
2,113,184	-				-0.1
2,113,184	-				-0.8
2,113,184	-				-0.1
2,113,184	-				-0.8
2,113,184	-				-0.7
2,113,184	-				+0.4
2,113,184	-				-0.8
2,113,184	-				+0.4
2,113,184	-				-0.5
2,113,184	-				-0.4
2,113,184	-				+0.4
2,113,184	-				+1.3
2,113,184	-				-1.4
2,113,184	-				+1.2
2,113,184	-				-2.5
2,113,184	-				-0.4
2,113,184	-				-0.3
2,113,184	-				-1.5
2,113,185	-				+0.0
2,113,189	+				+0.1
2,113,194	-				-0.2
2,113,197	-				+0.6
2,113,199	+				-0.8
2,113,201	+				-2.0
2,113,201	+				-2.8
2,113,207	-				+1.0
2,113,207	-				-1.8
2,113,207	-				-1.9
2,113,207	-				-0.3
2,113,207	-				+0.7
2,113,211	+				-0.4
2,113,211	+				-0.7
2,113,213	+				-0.6
2,113,221	+				+0.2
2,113,221	+				-0.5
2,113,221	+				-0.5
2,113,221	+				+0.0
2,113,221	+				-0.3
2,113,221	+				-0.3
2,113,221	+				+0.1
2,113,221	-				-0.2
2,113,221	-				+0.5
2,113,221	-				-1.0
2,113,229	-				+0.1
2,113,229	-				+0.7
2,113,229	-				-1.4
2,113,229	-				-0.1
2,113,229	-				+0.8
2,113,229	-				-1.3
2,113,229	-				-1.7
2,113,229	-				+0.3
2,113,229	-				+1.6
2,113,229	-				+0.6
2,113,233	+				-0.6
2,113,233	+				+0.2
2,113,233	+				-2.6
2,113,233	+				-1.0
2,113,233	+				-0.7
2,113,233	+				-1.3
2,113,233	+				-0.4
2,113,233	+				-1.4
2,113,233	+				+0.3
2,113,233	+				+0.5
2,113,233	+				-1.0
2,113,233	+				+0.4
2,113,233	+				-1.1
2,113,233	+				-2.1
2,113,233	+				-0.6
2,113,233	+				+0.5
2,113,233	+				+0.1
2,113,233	+				+0.2
2,113,234	+				-0.0
2,113,234	+				-0.1
2,113,234	+				+0.3
2,113,234	+				-1.4
2,113,234	+				-0.5
2,113,234	+				-0.3
2,113,236	+				-0.0
2,113,241	-				+0.9
2,113,241	-				-0.5
2,113,241	-				+1.3
2,113,241	-				-1.4
2,113,241	-				+0.6
2,113,241	-				+0.8
2,113,242	-				-0.2
2,113,242	-				-0.5
2,113,242	-				+0.8
2,113,242	-				+0.2
2,113,244	+				+0.6
2,113,244	+				+0.0
2,113,244	+				-1.7
2,113,254	-				-0.6
2,113,290	+				+0.2
2,113,368	+				-0.3
2,113,379	+				-1.0
2,113,381	+				+0.3
2,113,381	+				-2.0
2,113,387	-				+1.0
2,113,387	-				-1.6
2,113,387	-				-3.2
2,113,389	-				-0.5
2,113,392	+				+0.5
2,113,392	+				+0.6
2,113,394	+				+0.5
2,113,397	+				+0.9
2,113,400	-				-0.7
2,113,402	+				+0.2
2,113,402	+				+1.2
2,113,402	+				-1.2
2,113,402	+				-3.1
2,113,402	-				-0.3
2,113,404	+				-1.0
2,113,404	+				+0.4
2,113,404	+				+0.5
2,113,404	+				-1.0
2,113,404	+				+0.5
2,113,406	+				+0.2
2,113,410	-				-0.6
2,113,410	-				-0.5
2,113,410	-				+0.4
2,113,410	-				-0.2
2,113,410	-				-1.4
2,113,410	-				-0.4
2,113,410	-				+1.3
2,113,410	-				-0.4
2,113,411	-				-1.5
2,113,411	-				-0.4
2,113,412	-				+0.4
2,113,412	-				+0.0
2,113,412	-				+0.8
2,113,412	-				-0.3
2,113,412	-				+0.9
2,113,412	-				-0.2
2,113,412	-				+0.1
2,113,412	-				+0.2
2,113,412	-				-0.6
2,113,412	-				-0.2
2,113,414	+				-1.1
2,113,414	+				-0.0
2,113,414	+				-0.9
2,113,414	+				+1.0
2,113,414	+				-0.3
2,113,414	+				-0.0
2,113,414	+				-0.7
2,113,422	-				-1.1
2,113,422	-				-1.1
2,113,422	-				+0.0
2,113,422	-				-0.1
2,113,422	-				-1.2
2,113,422	-				-2.4
2,113,422	-				+1.3
2,113,422	-				+0.1
2,113,422	-				-1.7
2,113,422	-				+0.6
2,113,422	-				+0.1
2,113,422	-				+0.6
2,113,422	-				-0.0
2,113,422	-				-0.6
2,113,422	-				-1.0
2,113,422	-				-0.8
2,113,422	-				+0.2
2,113,422	-				-1.5
2,113,422	-				-0.5
2,113,424	-				-2.3
2,113,424	-				-0.7
2,113,426	+				+0.2
2,113,426	+				-0.1
2,113,426	+				-0.4
2,113,426	+				-0.6
2,113,426	-				-0.2
2,113,434	-				+0.3
2,113,434	-				+0.8
2,113,434	-				+0.4
2,113,434	-				+0.1
2,113,434	-				-0.3
2,113,438	-				+0.5
2,113,443	-				+0.2
2,113,443	-				+0.1
2,113,472	+				-0.0
2,113,490	+				+0.5
2,113,512	+				+0.1
2,113,517	+				-2.5
2,113,517	+				+1.2
2,113,519	+				-0.8
2,113,520	-				-0.9
2,113,585	+				+1.0
2,113,593	-				+0.9
2,113,593	-				+0.2
2,113,598	+				-1.3
2,113,621	-				-0.5
2,113,661	+				-0.7
2,113,703	-				+1.2
2,113,717	+				-2.4
2,113,720	+				+0.3
2,113,720	+				+0.2
2,113,725	+				-0.5
2,113,738	-		Dshi_1995	0.11	+0.0
2,113,741	+		Dshi_1995	0.11	+2.1
2,113,743	+		Dshi_1995	0.11	+1.0
2,113,750	-		Dshi_1995	0.12	-0.1
2,113,754	+		Dshi_1995	0.13	-0.0
2,113,754	-		Dshi_1995	0.13	-0.5
2,113,756	-		Dshi_1995	0.13	-0.2
2,113,761	-		Dshi_1995	0.14	-1.5
2,113,764	+		Dshi_1995	0.14	-1.0
2,113,764	+		Dshi_1995	0.14	+0.6
2,113,764	-		Dshi_1995	0.14	-0.3
2,113,765	-		Dshi_1995	0.14	-0.2
2,113,767	+		Dshi_1995	0.15	-1.7
2,113,767	+		Dshi_1995	0.15	-0.3
2,113,770	-		Dshi_1995	0.15	-0.8
2,113,775	-		Dshi_1995	0.16	+0.1
2,113,777	+		Dshi_1995	0.16	-0.4
2,113,785	-		Dshi_1995	0.17	-0.3
2,113,785	-		Dshi_1995	0.17	+1.0
2,113,789	+		Dshi_1995	0.18	+0.2
2,113,789	+		Dshi_1995	0.18	-0.0
2,113,789	+		Dshi_1995	0.18	+0.6
2,113,794	+		Dshi_1995	0.18	-0.2
2,113,794	+		Dshi_1995	0.18	+0.4
2,113,794	+		Dshi_1995	0.18	+1.4
2,113,797	-		Dshi_1995	0.19	+0.1
2,113,797	-		Dshi_1995	0.19	-0.3
2,113,797	-		Dshi_1995	0.19	+0.3
2,113,802	-		Dshi_1995	0.19	-0.8
2,113,802	-		Dshi_1995	0.19	-0.2
2,113,804	-		Dshi_1995	0.20	-0.9
2,113,804	-		Dshi_1995	0.20	-0.2
2,113,810	+		Dshi_1995	0.21	+0.7
2,113,837	-		Dshi_1995	0.24	+0.3
2,113,837	-		Dshi_1995	0.24	-0.5
2,113,842	-		Dshi_1995	0.25	-0.0
2,113,844	+		Dshi_1995	0.25	+0.6
2,113,844	-		Dshi_1995	0.25	+0.7
2,113,846	+		Dshi_1995	0.26	-0.0
2,113,846	+		Dshi_1995	0.26	-0.2
2,113,846	+		Dshi_1995	0.26	-0.2
2,113,846	+		Dshi_1995	0.26	-1.3
2,113,854	-		Dshi_1995	0.27	+0.3
2,113,879	+		Dshi_1995	0.30	+0.3
2,113,920	+		Dshi_1995	0.36	-1.1
2,113,920	+		Dshi_1995	0.36	+0.5
2,113,929	-		Dshi_1995	0.37	-0.7
2,113,981	+		Dshi_1995	0.44	+0.4
2,113,987	-		Dshi_1995	0.45	+1.1
2,113,990	+		Dshi_1995	0.46	+0.2
2,114,002	-		Dshi_1995	0.47	+0.9
2,114,084	+		Dshi_1995	0.59	-0.2
2,114,101	-		Dshi_1995	0.61	-0.8
2,114,110	+		Dshi_1995	0.62	+0.7
2,114,110	+		Dshi_1995	0.62	-0.5
2,114,143	+		Dshi_1995	0.67	-2.6
2,114,190	-		Dshi_1995	0.73	-0.8
2,114,273	-		Dshi_1995	0.85	-0.3
2,114,336	+				+1.2
2,114,393	+				+0.8
2,114,409	-				-0.2
2,114,422	+				+0.3
2,114,462	+				+0.4
2,114,462	+				+0.0
2,114,462	+				-1.0
2,114,462	+				-0.0
2,114,462	+				-0.3
2,114,470	-				-0.1
2,114,470	-				+0.7
2,114,498	-				-0.6
2,114,510	+				-0.1
2,114,563	-				-0.7
2,114,571	+				-0.7
2,114,576	+				+0.1
2,114,582	+				+0.0
2,114,694	-		Dshi_1996	0.14	-0.6
2,114,717	+		Dshi_1996	0.16	-0.2
2,114,769	+		Dshi_1996	0.20	+1.1
2,114,778	+		Dshi_1996	0.20	-0.5
2,115,021	-		Dshi_1996	0.39	-1.1
2,115,073	+		Dshi_1996	0.43	+1.1
2,115,095	+		Dshi_1996	0.45	-0.3
2,115,181	+		Dshi_1996	0.51	-0.3
2,115,199	-		Dshi_1996	0.53	-1.7
2,115,209	-		Dshi_1996	0.53	-0.9
2,115,254	-		Dshi_1996	0.57	+0.7
2,115,265	-		Dshi_1996	0.58	-0.1
2,115,300	-		Dshi_1996	0.60	-0.2