Strain Fitness in Shewanella amazonensis SB2B around Sama_3572

Experiment: L-Aspartic Acid (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Aspartic Acid (N)
4,207,488	-		Sama_3571	0.56	-0.8
4,207,521	+		Sama_3571	0.58	-0.9
4,207,521	+		Sama_3571	0.58	-0.2
4,207,521	+		Sama_3571	0.58	-1.8
4,207,522	-		Sama_3571	0.58	+1.6
4,207,522	-		Sama_3571	0.58	-2.3
4,207,522	-		Sama_3571	0.58	-1.4
4,207,551	+		Sama_3571	0.60	+2.3
4,207,552	-		Sama_3571	0.60	-1.2
4,207,552	-		Sama_3571	0.60	-0.2
4,207,552	-		Sama_3571	0.60	-0.7
4,207,552	-		Sama_3571	0.60	+0.1
4,207,658	+		Sama_3571	0.66	-1.7
4,207,659	-		Sama_3571	0.66	-0.1
4,207,666	+		Sama_3571	0.66	+0.7
4,207,667	-		Sama_3571	0.66	-0.9
4,207,673	+		Sama_3571	0.67	-1.6
4,207,674	-		Sama_3571	0.67	-0.1
4,207,713	+		Sama_3571	0.69	-0.3
4,207,713	+		Sama_3571	0.69	-0.9
4,207,713	+		Sama_3571	0.69	-0.7
4,207,713	+		Sama_3571	0.69	-0.2
4,207,713	+		Sama_3571	0.69	-0.6
4,207,714	-		Sama_3571	0.69	-1.5
4,207,714	-		Sama_3571	0.69	+0.8
4,207,714	-		Sama_3571	0.69	+5.2
4,207,717	+		Sama_3571	0.69	-0.7
4,207,717	+		Sama_3571	0.69	+0.7
4,207,717	+		Sama_3571	0.69	-0.8
4,207,717	+		Sama_3571	0.69	-1.9
4,207,718	-		Sama_3571	0.69	+2.6
4,207,718	-		Sama_3571	0.69	-1.8
4,207,718	-		Sama_3571	0.69	+0.9
4,207,718	-		Sama_3571	0.69	+1.7
4,207,718	-		Sama_3571	0.69	-0.8
4,207,718	-		Sama_3571	0.69	+1.6
4,207,718	-		Sama_3571	0.69	-1.5
4,207,718	-		Sama_3571	0.69	+2.8
4,207,718	-		Sama_3571	0.69	+1.3
4,207,870	+		Sama_3571	0.78	+0.8
4,207,870	+		Sama_3571	0.78	-0.4
4,207,870	+		Sama_3571	0.78	-0.2
4,207,870	+		Sama_3571	0.78	-0.6
4,207,870	+		Sama_3571	0.78	+2.2
4,207,870	+		Sama_3571	0.78	-0.4
4,207,870	+		Sama_3571	0.78	+0.4
4,207,870	+		Sama_3571	0.78	-0.3
4,207,871	-		Sama_3571	0.78	+1.7
4,207,871	-		Sama_3571	0.78	-0.6
4,207,871	-		Sama_3571	0.78	-2.0
4,207,871	-		Sama_3571	0.78	-1.8
4,207,871	-		Sama_3571	0.78	+5.1
4,207,871	-		Sama_3571	0.78	-1.4
4,207,911	+		Sama_3571	0.80	-0.7
4,207,912	-		Sama_3571	0.80	+0.1
4,207,912	-		Sama_3571	0.80	+0.6
4,207,961	+		Sama_3571	0.83	-2.3
4,207,961	+		Sama_3571	0.83	-2.3
4,207,961	+		Sama_3571	0.83	-0.5
4,207,961	+		Sama_3571	0.83	+1.2
4,207,962	-		Sama_3571	0.83	+0.2
4,207,962	-		Sama_3571	0.83	-1.1
4,207,962	-		Sama_3571	0.83	-1.1
4,207,962	-		Sama_3571	0.83	-0.5
4,207,962	-		Sama_3571	0.83	-0.3
4,207,962	-		Sama_3571	0.83	+0.7
4,207,965	+		Sama_3571	0.83	-0.4
4,207,965	+		Sama_3571	0.83	-1.1
4,207,965	+		Sama_3571	0.83	-0.1
4,207,965	+		Sama_3571	0.83	-1.8
4,207,965	+		Sama_3571	0.83	+0.2
4,207,965	+		Sama_3571	0.83	+0.1
4,207,965	+		Sama_3571	0.83	-2.0
4,207,965	+		Sama_3571	0.83	+3.9
4,207,966	-		Sama_3571	0.83	-1.2
4,207,966	-		Sama_3571	0.83	+0.9
4,207,966	-		Sama_3571	0.83	-0.8
4,207,966	-		Sama_3571	0.83	+0.6
4,207,966	-		Sama_3571	0.83	-1.3
4,207,966	-		Sama_3571	0.83	+0.5
4,207,966	-		Sama_3571	0.83	-1.3
4,207,966	-		Sama_3571	0.83	+1.9
4,207,966	-		Sama_3571	0.83	+0.1
4,207,966	-		Sama_3571	0.83	+3.1
4,207,966	-		Sama_3571	0.83	+0.5
4,207,984	+		Sama_3571	0.84	+0.7
4,207,985	-		Sama_3571	0.84	+0.3
4,207,995	+		Sama_3571	0.85	-2.8
4,207,996	-		Sama_3571	0.85	-2.3
4,208,071	+		Sama_3571	0.89	+1.6
4,208,071	+		Sama_3571	0.89	-0.7
4,208,071	+		Sama_3571	0.89	-1.3
4,208,071	+		Sama_3571	0.89	-0.8
4,208,071	+		Sama_3571	0.89	-0.4
4,208,071	+		Sama_3571	0.89	-0.0
4,208,072	-		Sama_3571	0.89	-0.8
4,208,072	-		Sama_3571	0.89	-1.8
4,208,072	-		Sama_3571	0.89	+4.1
4,208,072	-		Sama_3571	0.89	+4.1
4,208,072	-		Sama_3571	0.89	+0.4
4,208,072	-		Sama_3571	0.89	+0.8
4,208,072	-		Sama_3571	0.89	-1.8
4,208,274	+				-2.2
4,208,274	+				-0.8
4,208,274	+				+2.3
4,208,274	+				+2.1
4,208,274	+				-1.0
4,208,275	-				-1.3
4,208,275	-				-2.1
4,208,275	-				-2.9
4,208,285	+				+1.7
4,208,310	+				-0.5
4,208,310	+				-0.8
4,208,311	-				-0.5
4,208,311	-				+0.2
4,208,311	-				-2.2
4,208,311	-				-0.8
4,208,311	-				-1.0
4,208,311	-				-1.7
4,208,315	+				-1.5
4,208,315	+				-0.1
4,208,315	+				-1.7
4,208,367	-				+0.8
4,208,367	-				+1.9
4,208,367	-				+0.1
4,208,373	+				-0.9
4,208,373	+				-1.2
4,208,373	+				-2.3
4,208,373	+				+0.3
4,208,373	+				+0.1
4,208,373	+				-1.5
4,208,373	+				+0.1
4,208,374	-				-1.4
4,208,374	-				-1.6
4,208,374	-				+3.3
4,208,374	-				-1.3
4,208,374	-				+4.5
4,208,374	-				+0.1
4,208,374	-				+3.2
4,208,374	-				+1.1
4,208,374	-				-1.2
4,208,374	-				-0.5
4,208,374	-				-0.1
4,208,374	-				+0.2
4,208,376	+				+0.8
4,208,376	+				-0.6
4,208,376	+				-0.1
4,208,377	-				+1.4
4,208,377	-				-0.0
4,208,377	-				+0.8
4,208,418	+				-2.3
4,208,446	-				+0.5
4,208,450	+				+0.3
4,208,450	+				-0.6
4,208,450	+				+4.3
4,208,450	+				-1.4
4,208,450	+				+3.2
4,208,451	-				-0.5
4,208,451	-				-1.7
4,208,451	-				-0.4
4,208,451	-				+0.3
4,208,451	-				+1.2
4,208,497	-				+0.9
4,208,497	-				+4.0
4,208,497	-				-0.6
4,208,500	+				-1.6
4,208,538	+				+0.6
4,208,539	-				+0.6
4,208,542	+				-2.3
4,208,542	+				-1.2
4,208,542	+				+1.7
4,208,542	+				-0.9
4,208,542	+				+0.8
4,208,543	-				+0.3
4,208,543	-				+0.8
4,208,543	-				+0.3
4,208,543	-				+2.1
4,208,543	-				-1.1
4,208,543	-				-1.8
4,208,543	-				-1.3
4,208,594	-		Sama_3572	0.12	+0.4
4,208,619	+		Sama_3572	0.14	-1.3
4,208,619	+		Sama_3572	0.14	-0.5
4,208,620	-		Sama_3572	0.14	+0.8
4,208,620	-		Sama_3572	0.14	-1.2
4,208,623	-		Sama_3572	0.14	-0.2
4,208,623	-		Sama_3572	0.14	+1.2
4,208,623	-		Sama_3572	0.14	-0.2
4,208,690	-		Sama_3572	0.19	+0.5
4,208,734	+		Sama_3572	0.23	+0.3
4,208,734	+		Sama_3572	0.23	-0.5
4,208,734	+		Sama_3572	0.23	+0.7
4,208,735	-		Sama_3572	0.23	+1.6
4,208,735	-		Sama_3572	0.23	-0.1
4,208,798	+		Sama_3572	0.28	-1.8
4,208,798	+		Sama_3572	0.28	-0.1
4,208,798	+		Sama_3572	0.28	+2.2
4,208,799	-		Sama_3572	0.28	-0.5
4,208,801	+		Sama_3572	0.28	+0.2
4,208,802	-		Sama_3572	0.28	-0.2
4,208,956	+		Sama_3572	0.41	+0.5
4,208,956	+		Sama_3572	0.41	-0.2
4,208,957	-		Sama_3572	0.41	+3.5
4,208,961	+		Sama_3572	0.41	-1.1
4,208,961	+		Sama_3572	0.41	+0.6
4,208,986	+		Sama_3572	0.43	+0.8
4,208,986	+		Sama_3572	0.43	-1.0
4,208,987	-		Sama_3572	0.43	+1.3
4,208,999	-		Sama_3572	0.44	-0.8
4,208,999	-		Sama_3572	0.44	+2.7
4,209,004	+		Sama_3572	0.45	-1.3
4,209,004	+		Sama_3572	0.45	-1.2
4,209,005	-		Sama_3572	0.45	-2.2
4,209,005	-		Sama_3572	0.45	-0.6
4,209,016	-		Sama_3572	0.46	+1.9
4,209,018	+		Sama_3572	0.46	-1.4
4,209,019	-		Sama_3572	0.46	-0.8
4,209,035	+		Sama_3572	0.47	-0.5
4,209,121	-		Sama_3572	0.54	+0.9
4,209,126	+		Sama_3572	0.55	+0.3
4,209,126	+		Sama_3572	0.55	+0.9
4,209,127	-		Sama_3572	0.55	-3.2
4,209,131	+		Sama_3572	0.55	-0.8
4,209,131	+		Sama_3572	0.55	+1.3
4,209,132	-		Sama_3572	0.55	-1.8
4,209,132	-		Sama_3572	0.55	+0.8
4,209,132	-		Sama_3572	0.55	+0.1
4,209,132	-		Sama_3572	0.55	+0.1
4,209,162	+		Sama_3572	0.57	-1.9
4,209,187	+		Sama_3572	0.59	+1.8
4,209,256	-		Sama_3572	0.65	-0.9
4,209,265	+		Sama_3572	0.66	-0.3
4,209,266	-		Sama_3572	0.66	-0.5
4,209,293	+		Sama_3572	0.68	-2.8
4,209,293	+		Sama_3572	0.68	-0.2
4,209,294	-		Sama_3572	0.68	+0.8
4,209,294	-		Sama_3572	0.68	-0.2
4,209,294	-		Sama_3572	0.68	+0.3
4,209,294	-		Sama_3572	0.68	+0.2
4,209,362	+		Sama_3572	0.74	+0.9
4,209,363	-		Sama_3572	0.74	-3.2
4,209,386	-		Sama_3572	0.75	-3.1
4,209,402	+		Sama_3572	0.77	-1.5
4,209,402	+		Sama_3572	0.77	+0.8
4,209,445	+		Sama_3572	0.80	-1.1
4,209,445	+		Sama_3572	0.80	+0.8
4,209,446	-		Sama_3572	0.80	+0.2
4,209,446	-		Sama_3572	0.80	-1.6
4,209,468	+		Sama_3572	0.82	-1.9
4,209,552	+		Sama_3572	0.89	-1.3
4,209,552	+		Sama_3572	0.89	-1.1
4,209,552	+		Sama_3572	0.89	+0.2
4,209,552	+		Sama_3572	0.89	-0.8
4,209,552	+		Sama_3572	0.89	-1.2
4,209,553	-		Sama_3572	0.89	+1.1
4,209,553	-		Sama_3572	0.89	+0.3
4,209,553	-		Sama_3572	0.89	+1.9
4,209,553	-		Sama_3572	0.89	+0.3
4,209,583	+				+0.1
4,209,583	+				-0.6
4,209,584	-				-0.0
4,209,630	+				-0.9
4,209,631	-				-0.5
4,209,704	+				-0.8
4,209,705	-				-0.4
4,209,705	-				+2.4
4,209,804	+		Sama_3573	0.14	+0.1
4,209,804	+		Sama_3573	0.14	+0.6
4,209,890	+		Sama_3573	0.24	+0.3
4,209,890	+		Sama_3573	0.24	+1.5
4,209,891	-		Sama_3573	0.24	-2.5
4,209,891	-		Sama_3573	0.24	+3.8
4,209,891	-		Sama_3573	0.24	+1.4
4,209,893	-		Sama_3573	0.24	+0.3
4,209,950	+		Sama_3573	0.31	-0.2
4,209,950	+		Sama_3573	0.31	+1.3
4,209,950	+		Sama_3573	0.31	+7.0
4,209,950	+		Sama_3573	0.31	-1.9
4,209,951	-		Sama_3573	0.31	-1.7
4,209,951	-		Sama_3573	0.31	+1.4
4,209,951	-		Sama_3573	0.31	-2.1
4,209,951	-		Sama_3573	0.31	-1.2
4,209,951	-		Sama_3573	0.31	-1.4
4,210,082	-		Sama_3573	0.46	-1.8
4,210,088	+		Sama_3573	0.47	-0.5
4,210,089	-		Sama_3573	0.47	-0.7
4,210,208	-		Sama_3573	0.61	-1.1
4,210,255	+		Sama_3573	0.66	-2.6
4,210,261	+		Sama_3573	0.67	-0.1
4,210,262	-		Sama_3573	0.67	-0.9
4,210,279	+		Sama_3573	0.69	-2.5
4,210,280	-		Sama_3573	0.69	+1.3
4,210,280	-		Sama_3573	0.69	+1.3
4,210,298	+		Sama_3573	0.71	-0.4
4,210,298	+		Sama_3573	0.71	-1.7
4,210,299	-		Sama_3573	0.72	-1.1
4,210,373	+		Sama_3573	0.80	-0.4
4,210,374	-		Sama_3573	0.80	-1.8
4,210,388	+		Sama_3573	0.82	-0.6
4,210,388	+		Sama_3573	0.82	+0.6
4,210,388	+		Sama_3573	0.82	+2.2
4,210,388	+		Sama_3573	0.82	-1.3
4,210,389	-		Sama_3573	0.82	-0.5
4,210,581	+				-1.9
4,210,581	+				+1.2
4,210,582	-				+3.5
4,210,597	+		Sama_3574	0.12	+4.0
4,210,598	-		Sama_3574	0.12	+0.4
4,210,598	-		Sama_3574	0.12	+0.6
4,210,598	-		Sama_3574	0.12	-0.8
4,210,598	-		Sama_3574	0.12	+0.9