Strain Fitness in Shewanella amazonensis SB2B around Sama_2983

Experiment: L-Aspartic Acid (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Aspartic Acid (N)
3,552,398	-				+1.5
3,552,398	-				+0.1
3,552,413	+				-1.2
3,552,413	+				-1.3
3,552,414	-				-1.3
3,552,415	+				+0.8
3,552,416	-				-0.5
3,552,416	-				-0.5
3,552,487	+				+0.4
3,552,488	-				+3.0
3,552,488	-				+1.0
3,552,488	-				-2.7
3,552,571	+				-1.2
3,552,572	-				+1.9
3,552,591	+				-0.6
3,552,592	-				-0.7
3,552,592	-				-0.0
3,552,592	-				+0.8
3,552,592	-				-0.8
3,552,592	-				+0.3
3,552,598	-				+4.2
3,552,598	-				+1.5
3,552,605	+				+2.5
3,552,605	+				+0.1
3,552,605	+				+1.8
3,552,721	+				+0.7
3,552,721	+				-1.3
3,552,721	+				-1.6
3,552,722	-				-0.3
3,552,722	-				-1.6
3,552,722	-				-0.9
3,552,726	-				+1.7
3,552,748	-				-0.6
3,552,748	-				-1.0
3,552,750	+				+1.6
3,552,750	+				-2.0
3,552,751	-				-3.2
3,552,751	-				+0.2
3,552,751	-				-0.5
3,552,751	-				-0.2
3,552,903	+				+1.4
3,552,903	+				-1.9
3,552,903	+				+0.1
3,552,915	-				+0.4
3,552,994	+				+1.0
3,552,995	-				+0.2
3,552,995	-				-0.2
3,553,009	+				+0.0
3,553,009	+				-0.5
3,553,010	-				-1.0
3,553,016	+				+2.4
3,553,016	+				-0.3
3,553,016	+				+0.6
3,553,017	-				+0.2
3,553,017	-				+0.6
3,553,017	-				-1.0
3,553,025	+				-0.6
3,553,038	-				-0.3
3,553,048	-				-2.7
3,553,060	-				-0.9
3,553,099	+				+1.1
3,553,099	+				+1.7
3,553,100	-				-0.8
3,553,126	+				-0.3
3,553,127	-				+0.2
3,553,127	-				+0.6
3,553,127	-				+0.5
3,553,127	-				-1.8
3,553,319	+		Sama_2982	0.76	+0.8
3,553,320	-		Sama_2982	0.76	-1.0
3,553,320	-		Sama_2982	0.76	+0.2
3,553,336	+		Sama_2982	0.82	+3.9
3,553,336	+		Sama_2982	0.82	-2.4
3,553,336	+		Sama_2982	0.82	-1.1
3,553,336	+		Sama_2982	0.82	-0.9
3,553,337	-		Sama_2982	0.83	-0.0
3,553,337	-		Sama_2982	0.83	-0.8
3,553,337	-		Sama_2982	0.83	+1.5
3,553,387	+				-1.5
3,553,387	+				+0.2
3,553,387	+				-1.6
3,553,387	+				+0.6
3,553,387	+				+3.0
3,553,388	-				-1.1
3,553,388	-				+0.5
3,553,388	-				-0.1
3,553,388	-				-0.9
3,553,388	-				-0.7
3,553,388	-				+3.2
3,553,388	-				-0.6
3,553,388	-				-0.1
3,553,388	-				-1.1
3,553,388	-				+2.4
3,553,407	-				+0.5
3,553,622	+				-0.1
3,553,622	+				+1.8
3,553,622	+				+1.1
3,553,623	-				-0.9
3,553,623	-				-0.0
3,553,632	+		Sama_2983	0.10	+0.1
3,553,633	-		Sama_2983	0.10	-0.6
3,553,653	+		Sama_2983	0.11	-1.7
3,553,654	-		Sama_2983	0.11	+0.5
3,553,654	-		Sama_2983	0.11	+0.4
3,553,654	-		Sama_2983	0.11	+0.2
3,553,704	+		Sama_2983	0.13	-1.6
3,553,704	+		Sama_2983	0.13	+1.3
3,553,704	+		Sama_2983	0.13	-0.8
3,553,705	-		Sama_2983	0.13	-0.3
3,553,807	+		Sama_2983	0.17	-0.4
3,553,807	+		Sama_2983	0.17	+2.9
3,553,807	+		Sama_2983	0.17	+0.1
3,553,807	+		Sama_2983	0.17	-1.1
3,553,807	+		Sama_2983	0.17	-0.5
3,553,807	+		Sama_2983	0.17	-1.7
3,553,807	+		Sama_2983	0.17	-1.4
3,553,807	+		Sama_2983	0.17	+1.3
3,553,808	-		Sama_2983	0.17	-0.5
3,553,808	-		Sama_2983	0.17	+1.8
3,553,808	-		Sama_2983	0.17	-0.3
3,553,808	-		Sama_2983	0.17	+1.6
3,553,808	-		Sama_2983	0.17	-0.8
3,553,811	+		Sama_2983	0.17	-0.8
3,553,811	+		Sama_2983	0.17	-0.9
3,553,811	+		Sama_2983	0.17	-0.1
3,553,811	+		Sama_2983	0.17	+0.4
3,553,811	+		Sama_2983	0.17	-1.2
3,553,812	-		Sama_2983	0.17	+5.7
3,553,812	-		Sama_2983	0.17	-0.3
3,553,812	-		Sama_2983	0.17	-0.1
3,553,812	-		Sama_2983	0.17	+3.4
3,553,812	-		Sama_2983	0.17	-1.2
3,553,812	-		Sama_2983	0.17	-0.2
3,553,812	-		Sama_2983	0.17	-1.9
3,553,812	-		Sama_2983	0.17	-1.2
3,553,848	+		Sama_2983	0.19	+0.2
3,553,848	+		Sama_2983	0.19	+2.1
3,553,849	-		Sama_2983	0.19	+0.6
3,553,889	+		Sama_2983	0.20	-0.7
3,553,889	+		Sama_2983	0.20	-0.9
3,553,890	-		Sama_2983	0.21	-0.6
3,553,890	-		Sama_2983	0.21	-0.1
3,553,940	+		Sama_2983	0.23	+0.7
3,553,941	-		Sama_2983	0.23	-2.3
3,553,941	-		Sama_2983	0.23	+1.1
3,553,946	+		Sama_2983	0.23	+0.6
3,553,947	-		Sama_2983	0.23	-2.2
3,553,947	-		Sama_2983	0.23	-2.5
3,553,956	-		Sama_2983	0.23	-0.5
3,553,977	+		Sama_2983	0.24	-0.7
3,553,978	-		Sama_2983	0.24	-0.6
3,553,978	-		Sama_2983	0.24	-0.5
3,554,108	+		Sama_2983	0.29	+0.2
3,554,108	+		Sama_2983	0.29	-1.5
3,554,108	+		Sama_2983	0.29	-1.9
3,554,109	-		Sama_2983	0.29	-0.8
3,554,109	-		Sama_2983	0.29	-1.0
3,554,142	-		Sama_2983	0.31	+0.6
3,554,152	+		Sama_2983	0.31	+1.4
3,554,152	+		Sama_2983	0.31	-0.3
3,554,152	+		Sama_2983	0.31	-1.1
3,554,153	-		Sama_2983	0.31	+0.0
3,554,153	-		Sama_2983	0.31	-1.0
3,554,153	-		Sama_2983	0.31	+1.8
3,554,177	+		Sama_2983	0.32	-0.4
3,554,199	+		Sama_2983	0.33	-0.2
3,554,199	+		Sama_2983	0.33	-0.3
3,554,199	+		Sama_2983	0.33	-2.4
3,554,199	+		Sama_2983	0.33	+3.4
3,554,199	+		Sama_2983	0.33	+0.6
3,554,199	+		Sama_2983	0.33	+0.5
3,554,199	+		Sama_2983	0.33	+0.7
3,554,199	+		Sama_2983	0.33	-1.1
3,554,200	-		Sama_2983	0.33	-0.3
3,554,200	-		Sama_2983	0.33	-1.9
3,554,200	-		Sama_2983	0.33	-0.3
3,554,200	-		Sama_2983	0.33	-1.3
3,554,200	-		Sama_2983	0.33	-2.2
3,554,200	-		Sama_2983	0.33	+2.7
3,554,200	-		Sama_2983	0.33	-0.2
3,554,200	-		Sama_2983	0.33	-0.7
3,554,200	-		Sama_2983	0.33	+0.1
3,554,200	-		Sama_2983	0.33	+1.0
3,554,200	-		Sama_2983	0.33	+1.2
3,554,221	+		Sama_2983	0.34	-1.7
3,554,222	-		Sama_2983	0.34	+0.5
3,554,222	-		Sama_2983	0.34	+1.2
3,554,222	-		Sama_2983	0.34	-1.6
3,554,275	+		Sama_2983	0.36	-1.4
3,554,275	+		Sama_2983	0.36	-2.3
3,554,275	+		Sama_2983	0.36	-1.5
3,554,275	+		Sama_2983	0.36	+2.6
3,554,275	+		Sama_2983	0.36	-1.8
3,554,275	+		Sama_2983	0.36	-0.5
3,554,275	+		Sama_2983	0.36	-0.3
3,554,275	+		Sama_2983	0.36	+0.4
3,554,275	+		Sama_2983	0.36	-0.8
3,554,275	+		Sama_2983	0.36	+1.0
3,554,275	+		Sama_2983	0.36	-0.2
3,554,275	+		Sama_2983	0.36	+1.8
3,554,275	+		Sama_2983	0.36	-2.9
3,554,276	-		Sama_2983	0.36	+2.1
3,554,276	-		Sama_2983	0.36	-1.0
3,554,276	-		Sama_2983	0.36	-2.5
3,554,276	-		Sama_2983	0.36	+3.0
3,554,276	-		Sama_2983	0.36	-2.4
3,554,276	-		Sama_2983	0.36	-0.2
3,554,276	-		Sama_2983	0.36	-1.8
3,554,276	-		Sama_2983	0.36	-1.8
3,554,276	-		Sama_2983	0.36	+0.2
3,554,276	-		Sama_2983	0.36	-3.1
3,554,276	-		Sama_2983	0.36	-0.5
3,554,276	-		Sama_2983	0.36	+3.5
3,554,276	-		Sama_2983	0.36	-1.0
3,554,276	-		Sama_2983	0.36	-2.9
3,554,276	-		Sama_2983	0.36	+1.4
3,554,276	-		Sama_2983	0.36	-2.2
3,554,276	-		Sama_2983	0.36	+2.3
3,554,280	+		Sama_2983	0.36	-0.5
3,554,364	+		Sama_2983	0.40	-1.8
3,554,364	+		Sama_2983	0.40	+1.1
3,554,365	-		Sama_2983	0.40	-0.6
3,554,385	+		Sama_2983	0.40	-0.3
3,554,385	+		Sama_2983	0.40	-1.4
3,554,385	+		Sama_2983	0.40	-1.0
3,554,385	+		Sama_2983	0.40	-1.4
3,554,385	+		Sama_2983	0.40	+0.6
3,554,386	-		Sama_2983	0.40	-0.9
3,554,386	-		Sama_2983	0.40	-1.7
3,554,386	-		Sama_2983	0.40	+1.8
3,554,386	-		Sama_2983	0.40	+2.7
3,554,386	-		Sama_2983	0.40	+0.1
3,554,386	-		Sama_2983	0.40	+5.2
3,554,386	-		Sama_2983	0.40	+1.6
3,554,386	-		Sama_2983	0.40	-0.6
3,554,386	-		Sama_2983	0.40	-2.4
3,554,386	-		Sama_2983	0.40	+0.0
3,554,386	-		Sama_2983	0.40	+1.5
3,554,386	-		Sama_2983	0.40	-1.4
3,554,386	-		Sama_2983	0.40	-0.3
3,554,386	-		Sama_2983	0.40	-1.0
3,554,386	-		Sama_2983	0.40	+0.6
3,554,387	+		Sama_2983	0.41	+4.0
3,554,388	-		Sama_2983	0.41	-0.7
3,554,397	+		Sama_2983	0.41	+3.4
3,554,397	+		Sama_2983	0.41	-1.1
3,554,397	+		Sama_2983	0.41	-0.1
3,554,398	-		Sama_2983	0.41	-1.6
3,554,398	-		Sama_2983	0.41	+0.9
3,554,419	+		Sama_2983	0.42	+0.1
3,554,420	-		Sama_2983	0.42	-0.0
3,554,454	+		Sama_2983	0.43	+4.2
3,554,455	-		Sama_2983	0.43	+0.1
3,554,542	-		Sama_2983	0.47	+0.1
3,554,542	-		Sama_2983	0.47	-1.1
3,554,624	+		Sama_2983	0.50	-1.2
3,554,642	+		Sama_2983	0.51	-1.6
3,554,643	-		Sama_2983	0.51	-0.8
3,554,806	-		Sama_2983	0.57	+2.1
3,554,820	-		Sama_2983	0.58	+1.6
3,554,820	-		Sama_2983	0.58	-0.5
3,554,820	-		Sama_2983	0.58	+1.5
3,554,820	-		Sama_2983	0.58	+3.8
3,554,820	-		Sama_2983	0.58	-0.8
3,554,820	-		Sama_2983	0.58	-0.3
3,554,828	+		Sama_2983	0.58	+1.2
3,554,828	+		Sama_2983	0.58	-1.1
3,554,829	-		Sama_2983	0.58	+3.7
3,554,829	-		Sama_2983	0.58	-2.0
3,554,829	-		Sama_2983	0.58	-0.0
3,554,829	-		Sama_2983	0.58	+0.5
3,554,829	-		Sama_2983	0.58	-0.3
3,554,829	-		Sama_2983	0.58	-1.6
3,554,900	-		Sama_2983	0.61	+1.0
3,554,982	+		Sama_2983	0.64	+1.1
3,555,003	-		Sama_2983	0.65	-0.2
3,555,008	+		Sama_2983	0.66	+0.4
3,555,008	+		Sama_2983	0.66	-0.1
3,555,008	+		Sama_2983	0.66	+0.5
3,555,008	+		Sama_2983	0.66	+2.5
3,555,008	+		Sama_2983	0.66	-1.2
3,555,008	+		Sama_2983	0.66	-1.7
3,555,008	+		Sama_2983	0.66	-0.8
3,555,008	+		Sama_2983	0.66	-1.8
3,555,009	-		Sama_2983	0.66	-0.8
3,555,009	-		Sama_2983	0.66	-0.8
3,555,009	-		Sama_2983	0.66	-2.3
3,555,009	-		Sama_2983	0.66	+0.9
3,555,009	-		Sama_2983	0.66	-0.9
3,555,009	-		Sama_2983	0.66	+0.6
3,555,009	-		Sama_2983	0.66	+2.5
3,555,009	-		Sama_2983	0.66	-1.2
3,555,009	-		Sama_2983	0.66	-1.1
3,555,136	-		Sama_2983	0.71	-0.9
3,555,150	+		Sama_2983	0.71	+1.4
3,555,153	+		Sama_2983	0.71	+0.4
3,555,153	+		Sama_2983	0.71	+1.4
3,555,153	+		Sama_2983	0.71	-0.8
3,555,154	-		Sama_2983	0.71	+0.4
3,555,154	-		Sama_2983	0.71	-1.8
3,555,189	+		Sama_2983	0.73	-1.8
3,555,189	+		Sama_2983	0.73	-0.2
3,555,190	-		Sama_2983	0.73	+3.1
3,555,190	-		Sama_2983	0.73	-1.7
3,555,190	-		Sama_2983	0.73	+2.0
3,555,190	-		Sama_2983	0.73	-1.3
3,555,190	-		Sama_2983	0.73	-1.8
3,555,246	+		Sama_2983	0.75	-0.5
3,555,246	+		Sama_2983	0.75	-0.1
3,555,246	+		Sama_2983	0.75	-1.7
3,555,246	+		Sama_2983	0.75	-1.7
3,555,247	-		Sama_2983	0.75	+2.9
3,555,247	-		Sama_2983	0.75	-1.0
3,555,247	-		Sama_2983	0.75	-1.6
3,555,247	-		Sama_2983	0.75	-0.8
3,555,247	-		Sama_2983	0.75	-1.6
3,555,247	-		Sama_2983	0.75	-0.1
3,555,247	-		Sama_2983	0.75	+1.1
3,555,250	+		Sama_2983	0.75	+0.2
3,555,250	+		Sama_2983	0.75	+2.9
3,555,250	+		Sama_2983	0.75	+0.8
3,555,250	+		Sama_2983	0.75	-0.2
3,555,250	+		Sama_2983	0.75	-1.1
3,555,251	-		Sama_2983	0.75	+2.4
3,555,251	-		Sama_2983	0.75	-2.3
3,555,251	-		Sama_2983	0.75	-1.9
3,555,273	+		Sama_2983	0.76	-1.0
3,555,273	+		Sama_2983	0.76	-0.2
3,555,273	+		Sama_2983	0.76	-1.1
3,555,273	+		Sama_2983	0.76	-1.6
3,555,273	+		Sama_2983	0.76	-0.9
3,555,273	+		Sama_2983	0.76	+1.1
3,555,273	+		Sama_2983	0.76	-1.2
3,555,274	-		Sama_2983	0.76	+1.4
3,555,274	-		Sama_2983	0.76	+0.1
3,555,324	+		Sama_2983	0.78	-0.6
3,555,324	+		Sama_2983	0.78	-1.3
3,555,324	+		Sama_2983	0.78	-2.7
3,555,325	-		Sama_2983	0.78	+0.9
3,555,405	+		Sama_2983	0.82	-0.0
3,555,405	+		Sama_2983	0.82	-1.6
3,555,405	+		Sama_2983	0.82	+0.5
3,555,406	-		Sama_2983	0.82	-0.7
3,555,406	-		Sama_2983	0.82	+0.9
3,555,406	-		Sama_2983	0.82	-1.1
3,555,429	-		Sama_2983	0.82	-1.6
3,555,429	-		Sama_2983	0.82	+0.7
3,555,440	+		Sama_2983	0.83	-1.2
3,555,441	-		Sama_2983	0.83	+3.4
3,555,477	+		Sama_2983	0.84	+2.5
3,555,478	-		Sama_2983	0.84	-2.2
3,555,510	+		Sama_2983	0.86	-0.2
3,555,510	+		Sama_2983	0.86	-0.9
3,555,510	+		Sama_2983	0.86	+0.0
3,555,511	-		Sama_2983	0.86	+2.8
3,555,511	-		Sama_2983	0.86	-1.4
3,555,511	-		Sama_2983	0.86	-1.3
3,555,577	+		Sama_2983	0.88	-0.6
3,555,598	-		Sama_2983	0.89	-0.1
3,555,598	-		Sama_2983	0.89	+2.4
3,555,617	+				+0.3
3,555,617	+				-0.9
3,555,617	+				-1.2
3,555,618	-				-0.1
3,555,618	-				-0.1
3,555,618	-				+0.1
3,555,618	-				-0.8
3,555,667	+				+0.4
3,555,667	+				-0.0
3,555,667	+				+0.4
3,555,667	+				-1.3
3,555,667	+				-2.0
3,555,668	-				-1.1
3,555,668	-				+1.0
3,555,668	-				-1.0
3,555,668	-				+1.3
3,555,668	-				-0.4
3,555,670	+				-1.1
3,555,670	+				+0.5
3,555,670	+				+0.9
3,555,671	-				+1.4
3,555,671	-				-2.6
3,555,671	-				-0.1
3,555,671	-				+0.8
3,555,671	-				+1.0
3,555,750	-				+0.5
3,555,750	-				+1.6
3,555,750	-				+0.3
3,555,865	-				-1.9
3,555,903	+				-0.9
3,555,903	+				-1.2
3,555,903	+				+0.0
3,555,903	+				-2.8
3,555,904	-				+1.9
3,555,904	-				-1.2
3,555,924	+				+0.0
3,555,924	+				+2.4
3,555,924	+				-2.0
3,555,925	-				+2.9
3,555,925	-				-0.3
3,556,129	+	napG	Sama_2984	0.31	-2.0
3,556,129	+	napG	Sama_2984	0.31	-2.0
3,556,134	+	napG	Sama_2984	0.32	-0.4
3,556,224	+	napG	Sama_2984	0.44	-2.2
3,556,224	+	napG	Sama_2984	0.44	+1.6
3,556,224	+	napG	Sama_2984	0.44	-0.8
3,556,225	-	napG	Sama_2984	0.44	-2.3
3,556,307	+	napG	Sama_2984	0.56	-3.2
3,556,308	-	napG	Sama_2984	0.56	-2.2
3,556,443	+	napG	Sama_2984	0.74	+2.2
3,556,444	-	napG	Sama_2984	0.74	+2.5
3,556,444	-	napG	Sama_2984	0.74	+1.0
3,556,465	-	napG	Sama_2984	0.77	+1.0
3,556,503	-	napG	Sama_2984	0.83	-1.2
3,556,551	+	napG	Sama_2984	0.89	-2.1
3,556,552	-	napG	Sama_2984	0.89	-1.0
3,556,573	+				-0.3
3,556,573	+				+1.8
3,556,573	+				-2.1
3,556,574	-				+1.2
3,556,585	+				+2.1
3,556,625	+				-1.3
3,556,625	+				-0.4
3,556,625	+				+1.7
3,556,625	+				+1.5
3,556,626	-				+1.6
3,556,642	+				+1.4
3,556,642	+				+2.0
3,556,642	+				-1.8
3,556,643	-				-0.2
3,556,643	-				-1.1
3,556,643	-				-0.3
3,556,643	-				-0.7